2021-09-20 07:36
ftp://ftp.de.debian.org/debian/pool/main/m/mustang/mustang_3.2.3.orig.tar.gz
cppcheck-options: --library=posix --library=gnu -j2 --showtime=top5 --check-library --inconclusive --enable=style,information --template=daca2 -rp=temp -D__GNUC__ --platform=unix64 temp
platform: Linux-5.4.0-84-generic-x86_64-with-glibc2.29
python: 3.8.10
client-version: 1.3.12
compiler: g++ (Ubuntu 9.3.0-17ubuntu1~20.04) 9.3.0
cppcheck: head 2.5
head-info: ee475b181 (2021-09-19 20:22:30 +0200)
count: 203 167
elapsed-time: 9.1 11.4
head-timing-info:
 Overall time: 0s

old-timing-info:
 Overall time: 0s

head results:
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:525:15: portability: Non reentrant function 'strtok' called. For threadsafe applications it is recommended to use the reentrant replacement function 'strtok_r'. [prohibitedstrtokCalled]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:530:10: portability: Non reentrant function 'strtok' called. For threadsafe applications it is recommended to use the reentrant replacement function 'strtok_r'. [prohibitedstrtokCalled]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:570:15: portability: Non reentrant function 'strtok' called. For threadsafe applications it is recommended to use the reentrant replacement function 'strtok_r'. [prohibitedstrtokCalled]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:575:10: portability: Non reentrant function 'strtok' called. For threadsafe applications it is recommended to use the reentrant replacement function 'strtok_r'. [prohibitedstrtokCalled]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:54:10: warning: Member variable 'CmdLine::allocSize' is not initialized in the constructor. [uninitMemberVar]
MUSTANG_v3.2.3/src/CmdLineParser.h:75:7: style:inconclusive: Technically the member function 'CmdLine::getNoptions' can be const. [functionConst]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:192:14: note: Technically the member function 'CmdLine::getNoptions' can be const.
MUSTANG_v3.2.3/src/CmdLineParser.h:75:7: note: Technically the member function 'CmdLine::getNoptions' can be const.
MUSTANG_v3.2.3/src/CmdLineParser.h:91:7: performance:inconclusive: Technically the member function 'CmdLine::isOption' can be static (but you may consider moving to unnamed namespace). [functionStatic]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:174:14: note: Technically the member function 'CmdLine::isOption' can be static (but you may consider moving to unnamed namespace).
MUSTANG_v3.2.3/src/CmdLineParser.h:91:7: note: Technically the member function 'CmdLine::isOption' can be static (but you may consider moving to unnamed namespace).
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:101:2: warning: Possible leak in public function. The pointer 'option' is not deallocated before it is allocated. [publicAllocationError]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:883:8: style: The scope of the variable 'temp' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:287:36: style:inconclusive: Function 'putArgs' argument 1 names different: declaration 'arg' definition 'argmt'. [funcArgNamesDifferent]
MUSTANG_v3.2.3/src/CmdLineParser.h:124:29: note: Function 'putArgs' argument 1 names different: declaration 'arg' definition 'argmt'.
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:287:36: note: Function 'putArgs' argument 1 names different: declaration 'arg' definition 'argmt'.
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:600:8: style: Local variable 'buffer' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:508:7: note: Shadowed declaration
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:600:8: note: Shadow variable
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:611:8: style: Local variable 'buffer' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:508:7: note: Shadowed declaration
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:611:8: note: Shadow variable
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:675:14: style: Local variable 'i' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:637:11: note: Shadowed declaration
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:675:14: note: Shadow variable
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:720:14: style: Local variable 'i' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:637:11: note: Shadowed declaration
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:720:14: note: Shadow variable
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:723:15: style: Local variable 'i' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:720:14: note: Shadowed declaration
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:723:15: note: Shadow variable
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:767:14: style: Local variable 'i' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:637:11: note: Shadowed declaration
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:767:14: note: Shadow variable
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:788:14: style: Local variable 'i' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:637:11: note: Shadowed declaration
MUSTANG_v3.2.3/src/CmdLineParser_2.cpp:788:14: note: Shadow variable
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:63:9: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:342:7: style: The scope of the variable 'digit' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:69:35: style: Parameter 'dratiosA' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:69:54: style: Parameter 'dratiosB' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:77:33: style: Parameter 'dratiosA' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:77:52: style: Parameter 'dratiosB' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:95:37: style: Parameter 'dcosines' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:117:56: style: Parameter 'initial_vector' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:143:29: style: Parameter 'x1' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:143:42: style: Parameter 'x2' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:143:55: style: Parameter 'x3' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:173:36: style: Parameter 'A' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:173:48: style: Parameter 'B' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:173:60: style: Parameter 'C' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:173:72: style: Parameter 'D' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:298:81: style: Parameter 'V' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:355:26: style: Parameter 'A' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:355:39: style: Parameter 'B' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/3D_manip_functions.cpp:220:17: style: Variable 'AX[k][j]' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/distmat.cpp:57:8: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/distmat.cpp:99:33: style: Parameter 'A' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/distmat.cpp:99:45: style: Parameter 'B' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:304:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:255:25: style: Condition 'B_orig==-99' is always true [knownConditionTrueFalse]
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:217:37: note: Assuming that condition 'B_orig==-99' is not redundant
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:255:25: note: Condition 'B_orig==-99' is always true
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:255:59: style: Condition 'merge_trav->mates[1][B]==-99' is always true [knownConditionTrueFalse]
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:217:71: note: Assuming that condition 'merge_trav->mates[1][B]==-99' is not redundant
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:255:59: note: Condition 'merge_trav->mates[1][B]==-99' is always true
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:257:30: style: Condition 'B_orig==-99' is always true [knownConditionTrueFalse]
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:217:37: note: Assuming that condition 'B_orig==-99' is not redundant
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:257:30: note: Condition 'B_orig==-99' is always true
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:257:47: style: Condition 'Aprime!=-99' is always false [knownConditionTrueFalse]
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:217:71: note: Assuming that condition 'merge_trav->mates[1][B]==-99' is not redundant
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:254:25: note: Aprime is assigned 'merge_trav->mates[1][B]' here.
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:257:47: note: Condition 'Aprime!=-99' is always false
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:262:30: style: Condition 'B_orig!=-99' is always false [knownConditionTrueFalse]
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:217:37: note: Assuming that condition 'B_orig==-99' is not redundant
MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:262:30: note: Condition 'B_orig!=-99' is always false
MUSTANG_v3.2.3/src/jacobi.cpp:51:6: style: The scope of the variable 'k' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/jacobi.cpp:52:8: style: The scope of the variable 'p' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/jacobi.cpp:78:34: style: The scope of the variable 'sm' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/jacobi.cpp:122:13: style: Local variable 'i' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/jacobi.cpp:110:11: note: Shadowed declaration
MUSTANG_v3.2.3/src/jacobi.cpp:122:13: note: Shadow variable
MUSTANG_v3.2.3/src/jacobi.cpp:125:14: style: Local variable 'i' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/jacobi.cpp:110:11: note: Shadowed declaration
MUSTANG_v3.2.3/src/jacobi.cpp:125:14: note: Shadow variable
MUSTANG_v3.2.3/src/jacobi.cpp:133:14: style: Local variable 'i' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/jacobi.cpp:110:11: note: Shadowed declaration
MUSTANG_v3.2.3/src/jacobi.cpp:133:14: note: Shadow variable
MUSTANG_v3.2.3/src/jacobi.cpp:137:15: style: Local variable 'i' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/jacobi.cpp:110:11: note: Shadowed declaration
MUSTANG_v3.2.3/src/jacobi.cpp:137:15: note: Shadow variable
MUSTANG_v3.2.3/src/jacobi.cpp:155:14: style: Local variable 'i' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/jacobi.cpp:110:11: note: Shadowed declaration
MUSTANG_v3.2.3/src/jacobi.cpp:155:14: note: Shadow variable
MUSTANG_v3.2.3/src/jacobi.cpp:159:15: style: Local variable 'i' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/jacobi.cpp:110:11: note: Shadowed declaration
MUSTANG_v3.2.3/src/jacobi.cpp:159:15: note: Shadow variable
MUSTANG_v3.2.3/src/main.cpp:224:19: style: Variable 'region_found' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:252:5: style: Assignment of function parameter has no effect outside the function. [uselessAssignmentArg]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:253:8: style: Assignment of function parameter has no effect outside the function. [uselessAssignmentArg]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:254:8: style: Assignment of function parameter has no effect outside the function. [uselessAssignmentArg]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:158:3: style: Consecutive return, break, continue, goto or throw statements are unnecessary. [duplicateBreak]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:173:7: style: Consecutive return, break, continue, goto or throw statements are unnecessary. [duplicateBreak]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:65:8: style: The scope of the variable 'XBAR' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:65:15: style: The scope of the variable 'YBAR' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:65:22: style: The scope of the variable 'ZBAR' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:366:15: style: The scope of the variable 'SUMEA' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:449:9: style: The scope of the variable 'SS' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:506:9: style: The scope of the variable 'XX' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:506:13: style: The scope of the variable 'YY' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:506:17: style: The scope of the variable 'ZZ' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/alloc_routines.h:43:46: style: Parameter 'dim2' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/alloc_routines.h:51:46: style: Parameter 'dim2' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:252:9: style: Variable 'RXV' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:253:12: style: Variable 'RYV' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:254:12: style: Variable 'RZV' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:366:21: style: Variable 'SUMEA' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/multiple_superposition.cpp:568:7: style: Variable 'RMSD' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/neighbour_joining.cpp:60:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/neighbour_joining.cpp:61:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/neighbour_joining.cpp:62:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/neighbour_joining.cpp:63:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/neighbour_joining.cpp:64:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/neighbour_joining.cpp:65:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/neighbour_joining.cpp:66:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/neighbour_joining.cpp:131:45: style: Parameter 'R' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/neighbour_joining.cpp:155:64: style: Parameter 'R' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/neighbour_joining.cpp:225:54: style: Parameter 'current_nodes' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/output_algn.cpp:228:16: style: Obsolete function 'asctime' called. It is recommended to use 'strftime' instead. [prohibitedasctimeCalled]
MUSTANG_v3.2.3/src/output_algn.cpp:228:24: portability: Non reentrant function 'localtime' called. For threadsafe applications it is recommended to use the reentrant replacement function 'localtime_r'. [prohibitedlocaltimeCalled]
MUSTANG_v3.2.3/src/output_algn.cpp:397:53: style: Obsolete function 'asctime' called. It is recommended to use 'strftime' instead. [prohibitedasctimeCalled]
MUSTANG_v3.2.3/src/output_algn.cpp:397:61: portability: Non reentrant function 'localtime' called. For threadsafe applications it is recommended to use the reentrant replacement function 'localtime_r'. [prohibitedlocaltimeCalled]
MUSTANG_v3.2.3/src/output_algn.cpp:640:39: style: Obsolete function 'asctime' called. It is recommended to use 'strftime' instead. [prohibitedasctimeCalled]
MUSTANG_v3.2.3/src/output_algn.cpp:640:47: portability: Non reentrant function 'localtime' called. For threadsafe applications it is recommended to use the reentrant replacement function 'localtime_r'. [prohibitedlocaltimeCalled]
MUSTANG_v3.2.3/src/output_algn.cpp:697:21: style: Obsolete function 'asctime' called. It is recommended to use 'strftime' instead. [prohibitedasctimeCalled]
MUSTANG_v3.2.3/src/output_algn.cpp:697:29: portability: Non reentrant function 'localtime' called. For threadsafe applications it is recommended to use the reentrant replacement function 'localtime_r'. [prohibitedlocaltimeCalled]
MUSTANG_v3.2.3/src/ew_2.cpp:166:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/ew_2.cpp:1035:8: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/ew_2.cpp:268:22: style: Condition 'NEQUIV==5' is always false [knownConditionTrueFalse]
MUSTANG_v3.2.3/src/ew_2.cpp:266:16: note: Assuming that condition 'NEQUIV<5' is not redundant
MUSTANG_v3.2.3/src/ew_2.cpp:268:22: note: Condition 'NEQUIV==5' is always false
MUSTANG_v3.2.3/src/ew_2.cpp:810:6: style: The scope of the variable 'H_adj_flag' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/ew_2.cpp:782:29: style: Parameter 'A' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/ew_2.cpp:782:40: style: Parameter 'B' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/ew_2.cpp:1231:24: style: Parameter 'arr' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/ew_2.cpp:117:14: style: Variable 'temp1' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/ew_2.cpp:117:26: style: Variable 'temp2' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/ew_2.cpp:117:38: style: Variable 'temp3' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/ew_2.cpp:117:57: style: Variable 'env_function' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/ew_2.cpp:795:15: style: Variable 'CORESIZE' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/ew_2.cpp:810:17: style: Variable 'H_adj_flag' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/ew_2.cpp:1013:15: style: Variable 'repair_flag' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/ew_2.cpp:1025:15: style: Variable 'repair_flag' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/pairwise_global_structalgn.cpp:63:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/pairwise_global_structalgn.cpp:89:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/pairwise_global_structalgn.cpp:100:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/pairwise_global_structalgn.cpp:112:8: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/pairwise_global_structalgn.cpp:266:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/pairwise_global_structalgn.cpp:303:18: style: Parameter 'arr' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/pairwise_global_structalgn.cpp:317:43: style: Parameter 'AA' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/pairwise_global_structalgn.cpp:317:53: style: Parameter 'BB' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/primary_lib_gen.cpp:50:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/primary_lib_gen.cpp:51:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/primary_lib_gen.cpp:52:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/primary_lib_gen.cpp:53:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/primary_lib_gen.cpp:54:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:68:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:69:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:70:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:71:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:94:8: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:95:8: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:100:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:102:8: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:105:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:106:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:137:8: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:375:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:376:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:459:8: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:460:8: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:463:8: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:648:8: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/progress_align_3.cpp:398:3: style:inconclusive: Found duplicate branches for 'if' and 'else'. [duplicateBranch]
MUSTANG_v3.2.3/src/progress_align_3.cpp:400:3: note: Found duplicate branches for 'if' and 'else'.
MUSTANG_v3.2.3/src/progress_align_3.cpp:398:3: note: Found duplicate branches for 'if' and 'else'.
MUSTANG_v3.2.3/src/progress_align_3.cpp:259:19: style: Parameter 'arr' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/progress_align_3.cpp:222:46: style: Parameter 'im' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/init_routines.h:40:44: style: Parameter 'dim2' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/pdb_ripper_2.cpp:176:4: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
MUSTANG_v3.2.3/src/pdb_ripper_2.cpp:398:3: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
MUSTANG_v3.2.3/src/pdb_ripper_2.cpp:407:3: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
MUSTANG_v3.2.3/src/pdb_ripper_2.cpp:53:6: style: The scope of the variable 'chain_id' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/pdb_ripper_2.cpp:53:15: style: Variable 'chain_id' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/pdb_ripper_2.cpp:72:13: style: Variable 'chain_id' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/sse_RK.cpp:158:3: style: Assignment of function parameter has no effect outside the function. [uselessAssignmentArg]
MUSTANG_v3.2.3/src/sse_RK.cpp:182:6: style: The scope of the variable 'ldcntr' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/sse_RK.cpp:183:6: style: The scope of the variable 'Hterminal_flag' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/sse_RK.cpp:158:8: style: Variable 'IRES' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/sse_RK.cpp:182:13: style: Variable 'ldcntr' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/sse_RK.cpp:183:21: style: Variable 'Hterminal_flag' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/superpose_2.cpp:65:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/superpose_2.cpp:66:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/superpose_2.cpp:67:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/superpose_2.cpp:68:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/superpose_2.cpp:69:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/superpose_2.cpp:70:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/superpose_2.cpp:122:95: style: Parameter 'CM_A' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/superpose_2.cpp:122:111: style: Parameter 'CM_B' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/superpose_2.cpp:203:28: style: Parameter 'eigen_values' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/superpose_2.cpp:89:14: style: Variable 'temp' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/superpose_on_core_2.cpp:515:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/superpose_on_core_2.cpp:397:6: style: The scope of the variable 'nres' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/superpose_on_core_2.cpp:495:6: style: The scope of the variable 'Size' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/superpose_on_core_2.cpp:228:15: style: Variable 'temp_ins' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/superpose_on_core_2.cpp:397:11: style: Variable 'nres' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/superpose_on_core_2.cpp:495:11: style: Variable 'Size' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:645:20: style: Condition 'struc_ind=0&&A2I_hash[0][i]<=PROT_SIZES[a]-5' is always false [knownConditionTrueFalse]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:466:10: style: The scope of the variable 'deviation' can be reduced. [variableScope]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:428:14: style: Local variable 'l' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:111:7: note: Shadowed declaration
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:428:14: note: Shadow variable
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:431:14: style: Local variable 'l' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:111:7: note: Shadowed declaration
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:431:14: note: Shadow variable
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:435:14: style: Local variable 'l' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:111:7: note: Shadowed declaration
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:435:14: note: Shadow variable
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:437:14: style: Local variable 'l' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:111:7: note: Shadowed declaration
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:437:14: note: Shadow variable
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:447:14: style: Local variable 'l' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:111:7: note: Shadowed declaration
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:447:14: note: Shadow variable
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:450:14: style: Local variable 'l' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:111:7: note: Shadowed declaration
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:450:14: note: Shadow variable
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:454:14: style: Local variable 'l' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:111:7: note: Shadowed declaration
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:454:14: note: Shadow variable
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:456:14: style: Local variable 'l' shadows outer variable [shadowVariable]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:111:7: note: Shadowed declaration
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:456:14: note: Shadow variable
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:57:29: style: Parameter 'A' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:57:40: style: Parameter 'B' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:571:16: style: Variable 'some_flag' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:65:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:617:12: style: Variable 'struc_ind' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:66:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:627:58: style: Variable 'struc_ind' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:67:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:628:21: style: Variable 'struc_ind' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:68:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:646:20: style: Variable 'struc_ind' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:69:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:70:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:122:100: style: Parameter 'CM_A' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:122:116: style: Parameter 'CM_B' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:213:33: style: Parameter 'eigen_values' can be declared with const [constParameter]
MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:89:14: style: Variable 'temp' is assigned a value that is never used. [unreadVariable]
MUSTANG_v3.2.3/src/upgma.cpp:59:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/upgma.cpp:60:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/upgma.cpp:61:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/upgma.cpp:62:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/upgma.cpp:63:7: debug: Wrong data detected by condition !tok->next()->astOperand1() [DacaWrongData]
MUSTANG_v3.2.3/src/upgma.cpp:191:60: style: Parameter 'current_nodes' can be declared with const [constParameter]
diff:
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:117:56: style: Parameter 'initial_vector' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:143:29: style: Parameter 'x1' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:143:42: style: Parameter 'x2' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:143:55: style: Parameter 'x3' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:173:36: style: Parameter 'A' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:173:48: style: Parameter 'B' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:173:60: style: Parameter 'C' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:173:72: style: Parameter 'D' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:298:81: style: Parameter 'V' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:355:26: style: Parameter 'A' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:355:39: style: Parameter 'B' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:69:35: style: Parameter 'dratiosA' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:69:54: style: Parameter 'dratiosB' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:77:33: style: Parameter 'dratiosA' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:77:52: style: Parameter 'dratiosB' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/3D_manip_functions.cpp:95:37: style: Parameter 'dcosines' can be declared with const [constParameter]
2.5 MUSTANG_v3.2.3/src/alloc_routines.h:37:9: warning: The address of local variable 'Coords_Set_moving' might be accessed at non-zero index. [objectIndex]
     MUSTANG_v3.2.3/src/ew_2.cpp:805:12: note: Address of variable taken here.
     MUSTANG_v3.2.3/src/ew_2.cpp:805:12: note: Calling function 'ALLOC_2D', 1st argument '&Coords_Set_moving' value is lifetime=Coords_Set_moving
     MUSTANG_v3.2.3/src/alloc_routines.h:37:9: note: The address of local variable 'Coords_Set_moving' might be accessed at non-zero index.
2.5 MUSTANG_v3.2.3/src/alloc_routines.h:37:9: warning: The address of local variable 'Coords_Set_stationary' might be accessed at non-zero index. [objectIndex]
     MUSTANG_v3.2.3/src/ew_2.cpp:804:12: note: Address of variable taken here.
     MUSTANG_v3.2.3/src/ew_2.cpp:804:12: note: Calling function 'ALLOC_2D', 1st argument '&Coords_Set_stationary' value is lifetime=Coords_Set_stationary
     MUSTANG_v3.2.3/src/alloc_routines.h:37:9: note: The address of local variable 'Coords_Set_stationary' might be accessed at non-zero index.
2.5 MUSTANG_v3.2.3/src/alloc_routines.h:37:9: warning: The address of local variable 'RHO' might be accessed at non-zero index. [objectIndex]
     MUSTANG_v3.2.3/src/multiple_superposition.cpp:282:12: note: Address of variable taken here.
     MUSTANG_v3.2.3/src/multiple_superposition.cpp:282:12: note: Calling function 'ALLOC_2D', 1st argument '&RHO' value is lifetime=RHO
     MUSTANG_v3.2.3/src/alloc_routines.h:37:9: note: The address of local variable 'RHO' might be accessed at non-zero index.
head MUSTANG_v3.2.3/src/alloc_routines.h:43:46: style: Parameter 'dim2' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/alloc_routines.h:51:46: style: Parameter 'dim2' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/distmat.cpp:99:33: style: Parameter 'A' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/distmat.cpp:99:45: style: Parameter 'B' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/ew_2.cpp:1231:24: style: Parameter 'arr' can be declared with const [constParameter]
2.5 MUSTANG_v3.2.3/src/ew_2.cpp:1400:36: style: Variable 'ind[1]' is assigned a value that is never used. [unreadVariable]
head MUSTANG_v3.2.3/src/ew_2.cpp:782:29: style: Parameter 'A' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/ew_2.cpp:782:40: style: Parameter 'B' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:257:47: style: Condition 'Aprime!=-99' is always false [knownConditionTrueFalse]
     MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:217:71: note: Assuming that condition 'merge_trav->mates[1][B]==-99' is not redundant
     MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:254:25: note: Aprime is assigned 'merge_trav->mates[1][B]' here.
     MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:257:47: note: Condition 'Aprime!=-99' is always false
2.5 MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:257:47: style: Condition 'Aprime!=-99' is always false [knownConditionTrueFalse]
     MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:217:71: note: Assuming that condition 'merge_trav->mates[1][B]==-99' is not redundant
     MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:254:47: note: Assignment 'Aprime=merge_trav->mates[1][B]', assigned value is -99
     MUSTANG_v3.2.3/src/extended_lib_gen_3.cpp:257:47: note: Condition 'Aprime!=-99' is always false
head MUSTANG_v3.2.3/src/init_routines.h:40:44: style: Parameter 'dim2' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/neighbour_joining.cpp:131:45: style: Parameter 'R' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/neighbour_joining.cpp:155:64: style: Parameter 'R' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/neighbour_joining.cpp:225:54: style: Parameter 'current_nodes' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/pairwise_global_structalgn.cpp:303:18: style: Parameter 'arr' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/pairwise_global_structalgn.cpp:317:43: style: Parameter 'AA' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/pairwise_global_structalgn.cpp:317:53: style: Parameter 'BB' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/progress_align_3.cpp:222:46: style: Parameter 'im' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/progress_align_3.cpp:259:19: style: Parameter 'arr' can be declared with const [constParameter]
2.5 MUSTANG_v3.2.3/src/progress_align_3.cpp:714:10: warning: The address of local variable 'result_pairalgn' might be accessed at non-zero index. [objectIndex]
     MUSTANG_v3.2.3/src/progress_align_3.cpp:466:84: note: Address of variable taken here.
     MUSTANG_v3.2.3/src/progress_align_3.cpp:466:84: note: Calling function 'DYNAMIC_PROGRAMMING_METHOD_for_FinAlgn', 4th argument '&result_pairalgn' value is lifetime=result_pairalgn
     MUSTANG_v3.2.3/src/progress_align_3.cpp:697:16: note: Assuming condition is Assuming condition is false
     MUSTANG_v3.2.3/src/progress_align_3.cpp:714:10: note: The address of local variable 'result_pairalgn' might be accessed at non-zero index.
head MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:57:29: style: Parameter 'A' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/refine_pairalgn_2.cpp:57:40: style: Parameter 'B' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/superpose_2.cpp:122:111: style: Parameter 'CM_B' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/superpose_2.cpp:122:95: style: Parameter 'CM_A' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/superpose_2.cpp:203:28: style: Parameter 'eigen_values' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:122:100: style: Parameter 'CM_A' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:122:116: style: Parameter 'CM_B' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/superpose_weightedRMS.cpp:213:33: style: Parameter 'eigen_values' can be declared with const [constParameter]
head MUSTANG_v3.2.3/src/upgma.cpp:191:60: style: Parameter 'current_nodes' can be declared with const [constParameter]


DONE