ftp://ftp.de.debian.org/debian/pool/main/m/mmseqs2/mmseqs2_15-6f452+ds.orig.tar.xz
cppcheck-options: --library=posix --library=gnu --library=bsd --library=openmp --library=zlib  --inconclusive --enable=style,information --inline-suppr --template=daca2 --disable=missingInclude --suppress=unmatchedSuppression --check-library --debug-warnings --suppress=autoNoType --suppress=valueFlowBailout --suppress=bailoutUninitVar --suppress=symbolDatabaseWarning --suppress=normalCheckLevelConditionExpressions -D__GNUC__ --platform=unix64 -j3
MMseqs2-15-6f452/src/alignment/rescorediagonal.cpp:394:117: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/clustering/Clustering.cpp:20:109: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/taxonomy/aggregatetax.cpp:23:119: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/test/TestDBReaderIndexSerialization.cpp:7:97: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/compress.cpp:14:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/convertca3m.cpp:18:144: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/convertprofiledb.cpp:140:100: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/createseqfiledb.cpp:15:115: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/db2tar.cpp:49:101: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/diffseqdbs.cpp:41:116: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/extractalignedregion.cpp:19:109: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/expandaln.cpp:100:112: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/extractframes.cpp:23:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/extractorfs.cpp:23:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/filterdb.cpp:97:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/indexdb.cpp:58:108: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/mergeclusters.cpp:23:108: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/mergeresultsbyset.cpp:15:114: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/orftocontig.cpp:18:118: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/prefixid.cpp:14:99: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/proteinaln2nucl.cpp:17:113: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/result2dnamsa.cpp:23:109: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/result2flat.cpp:13:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/result2rbh.cpp:14:117: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/result2repseq.cpp:15:114: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/reverseseq.cpp:16:114: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/result2stats.cpp:62:123: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/result2stats.cpp:360:125: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/sequence2profile.cpp:25:115: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/sortresult.cpp:18:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/splitsequence.cpp:24:40: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/summarizealis.cpp:18:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/summarizeresult.cpp:17:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/summarizeheaders.cpp:16:116: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/summarizetabs.cpp:183:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/summarizetabs.cpp:211:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/swapresults.cpp:48:113: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/translateaa.cpp:18:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
MMseqs2-15-6f452/src/util/translatenucs.cpp:18:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
ftp://ftp.de.debian.org/debian/pool/main/m/metaeuk/metaeuk_7-bba0d80+ds.orig.tar.xz
cppcheck-options: --library=posix --library=gnu --library=bsd --library=openmp --library=zlib  --inconclusive --enable=style,information --inline-suppr --template=daca2 --disable=missingInclude --suppress=unmatchedSuppression --check-library --debug-warnings --suppress=autoNoType --suppress=valueFlowBailout --suppress=bailoutUninitVar --suppress=symbolDatabaseWarning --suppress=normalCheckLevelConditionExpressions -D__GNUC__ --platform=unix64 -j3
metaeuk-7-bba0d80/lib/mmseqs/src/alignment/rescorediagonal.cpp:394:117: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/clustering/Clustering.cpp:20:109: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/taxonomy/aggregatetax.cpp:23:119: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/test/TestDBReaderIndexSerialization.cpp:7:97: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/compress.cpp:14:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/convertca3m.cpp:18:144: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/convertprofiledb.cpp:140:100: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/createseqfiledb.cpp:15:115: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/db2tar.cpp:49:101: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/diffseqdbs.cpp:41:116: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/extractalignedregion.cpp:19:109: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/expandaln.cpp:100:112: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/extractframes.cpp:23:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/extractorfs.cpp:23:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/filterdb.cpp:97:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/indexdb.cpp:58:108: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/makepaddedseqdb.cpp:30:56: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/mergeclusters.cpp:23:108: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/mergeresultsbyset.cpp:15:114: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/orftocontig.cpp:18:118: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/prefixid.cpp:14:99: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/recoverlongestorf.cpp:19:119: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/proteinaln2nucl.cpp:17:113: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/result2dnamsa.cpp:23:109: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/result2flat.cpp:13:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/result2rbh.cpp:14:117: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/result2repseq.cpp:15:114: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/result2stats.cpp:62:123: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/result2stats.cpp:360:125: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/reverseseq.cpp:16:114: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/sequence2profile.cpp:25:115: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/sortresult.cpp:18:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/splitsequence.cpp:24:40: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/summarizealis.cpp:18:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/summarizeheaders.cpp:16:116: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/summarizeresult.cpp:17:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/summarizetabs.cpp:183:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/summarizetabs.cpp:211:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/swapresults.cpp:48:113: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/translateaa.cpp:18:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/lib/mmseqs/src/util/translatenucs.cpp:18:111: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/src/exonpredictor/groupstoacc.cpp:21:121: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/src/exonpredictor/reduceredundancy.cpp:174:119: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/src/exonpredictor/resultspercontig.cpp:39:118: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]
metaeuk-7-bba0d80/src/exonpredictor/unitesetstofasta.cpp:346:116: debug: valueFlowConditionExpressions bailout: Skipping function due to incomplete variable USE_INDEX [valueFlowBailoutIncompleteVar]