2021-10-22 22:29
ftp://ftp.de.debian.org/debian/pool/main/g/gromacs/gromacs_2021.3.orig.tar.gz
cppcheck-options: --library=posix --library=gnu  --showtime=top5 --check-library --inconclusive --enable=style,information --template=daca2 -D__GNUC__ --platform=unix64 -rp=temp
platform: Linux-5.10.0-9-amd64-x86_64-with-glibc2.31
python: 3.9.2
client-version: 1.3.15
compiler: g++ (Debian 10.2.1-6) 10.2.1 20210110
cppcheck: head 2.6
head-info: ca83222ba (2021-10-21 14:44:48 +0200)
count: 3878 3883
elapsed-time: 1123.3 1153.8
head-timing-info:
 Overall time: 0s

old-timing-info:
 Overall time: 0s

head results:
gromacs-2021.3/api/gmxapi/cpp/session.cpp:60:16: warning: Member variable 'SignalManager::runner_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/api/gmxapi/cpp/session.cpp:101:16: style: Redundant initialization for 'successful'. The initialized value is overwritten before it is read. [redundantInitialization]
gromacs-2021.3/api/gmxapi/cpp/session.cpp:92:21: note: successful is initialized
gromacs-2021.3/api/gmxapi/cpp/session.cpp:101:16: note: successful is overwritten
gromacs-2021.3/api/gmxapi/cpp/session.cpp:60:55: style:inconclusive: Function 'SignalManager' argument 1 names different: declaration 'mdStopHandlerBuilder' definition 'stopHandlerBuilder'. [funcArgNamesDifferent]
gromacs-2021.3/api/gmxapi/cpp/mdsignals.h:109:53: note: Function 'SignalManager' argument 1 names different: declaration 'mdStopHandlerBuilder' definition 'stopHandlerBuilder'.
gromacs-2021.3/api/gmxapi/cpp/session.cpp:60:55: note: Function 'SignalManager' argument 1 names different: declaration 'mdStopHandlerBuilder' definition 'stopHandlerBuilder'.
gromacs-2021.3/api/gmxapi/cpp/session.cpp:132:55: style:inconclusive: Function 'SessionImpl' argument 4 names different: declaration 'logFilehandle' definition 'fplog'. [funcArgNamesDifferent]
gromacs-2021.3/api/gmxapi/cpp/session_impl.h:192:46: note: Function 'SessionImpl' argument 4 names different: declaration 'logFilehandle' definition 'fplog'.
gromacs-2021.3/api/gmxapi/cpp/session.cpp:132:55: note: Function 'SessionImpl' argument 4 names different: declaration 'logFilehandle' definition 'fplog'.
gromacs-2021.3/api/gmxapi/cpp/workflow.cpp:74:5: style: Statements following return, break, continue, goto or throw will never be executed. [unreachableCode]
gromacs-2021.3/api/gmxapi/cpp/context.cpp:239:21: error: Exception thrown in function declared not to throw exceptions. [throwInNoexceptFunction]
gromacs-2021.3/api/gmxapi/cpp/tpr.cpp:355:7: performance:inconclusive: Technically the member function 'gmxapicompat::GmxMdParamsImpl::extract' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/api/gmxapi/cpp/tpr.cpp:337:21: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/api/gmxapi/cpp/tpr.cpp:341:21: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/api/gmxapi/cpp/tpr.cpp:345:21: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/api/gmxapi/cpp/tpr.cpp:349:21: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/api/gmxapi/cpp/tpr.cpp:357:20: style: Variable 'value' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/api/nblib/listed_forces/tests/bondtypes.cpp:115:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/listed_forces/tests/conversions.cpp:82:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/listed_forces/tests/calculator.cpp:132:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/listed_forces/tests/helpers.cpp:101:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/listed_forces/tests/transformations.cpp:77:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/listed_forces/tests/typetests.cpp:136:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/tests/box.cpp:63:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/tests/gmxcalculator.cpp:69:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/tests/interactions.cpp:120:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/tests/particletype.cpp:63:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/tests/molecules.cpp:67:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/tests/nbkernelsystem.cpp:88:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/tests/simstate.cpp:75:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/tests/topology.cpp:88:1: error: syntax error [syntaxError]
gromacs-2021.3/api/nblib/topology.cpp:132:15: style: Variable 'expansionArrayStage2' can be declared with const [constVariable]
gromacs-2021.3/api/nblib/util/tests/setup.cpp:69:1: error: syntax error [syntaxError]
gromacs-2021.3/cmake/TestFileOffsetBits.cpp:6:7: style: Variable 'off_t_is_large' can be declared with const [constVariable]
gromacs-2021.3/api/nblib/util/tests/traits.cpp:63:1: error: syntax error [syntaxError]
gromacs-2021.3/cmake/TestFileOffsetBits.cpp:7:10: error: Uninitialized variable: off_t_is_large [uninitvar]
gromacs-2021.3/cmake/TestFileOffsetBits.cpp:6:7: style: Variable 'off_t_is_large' is not assigned a value. [unassignedVariable]
gromacs-2021.3/cmake/TestFujitsuSparc64.cpp:6:0: error: #error This compiler is not targetting Fujitsu Sparc64 [preprocessorErrorDirective]
gromacs-2021.3/cmake/TestGlibcVersion.cpp:9:0: error: #error A glibc version prior to 2.23 was found [preprocessorErrorDirective]
gromacs-2021.3/cmake/TestInlineASM_gcc_x86.cpp:24:0: error: #error Cannot detect whether this is a 32-bit or 64-bit x86 build. [preprocessorErrorDirective]
gromacs-2021.3/cmake/TestIntelLLVM.cpp:2:0: error: #error  [preprocessorErrorDirective]
gromacs-2021.3/cmake/TestMIC.cpp:6:0: error: #error This compiler is not targetting MIC [preprocessorErrorDirective]
gromacs-2021.3/cmake/TestPipes.cpp:13:3: error: Resource leak: fp [resourceLeak]
gromacs-2021.3/cmake/TestSIGUSR1.cpp:6:9: style: Variable 'i' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/cmake/TestX86.cpp:6:0: error: #error This is not x86 [preprocessorErrorDirective]
gromacs-2021.3/python_packaging/sample_restraint/tests/test_bounding_restraint.cpp:26:1: error: syntax error [syntaxError]
gromacs-2021.3/python_packaging/sample_restraint/tests/test_histogram.cpp:25:1: error: syntax error [syntaxError]
gromacs-2021.3/python_packaging/sample_restraint/src/pythonmodule/export_plugin.cpp:157:9: performance: Variable 'name_' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/python_packaging/sample_restraint/src/pythonmodule/export_plugin.cpp:278:9: performance: Variable 'name_' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/python_packaging/sample_restraint/src/pythonmodule/export_plugin.cpp:172:26: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/python_packaging/sample_restraint/src/pythonmodule/export_plugin.cpp:296:26: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/python_packaging/sample_restraint/src/cpp/ensemblepotential.cpp:221:17: style: Consider using std::fill algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/python_packaging/sample_restraint/src/cpp/ensemblepotential.cpp:299:61: debug: Wrong data detected by condition !tok->next()->astOperand2() [DacaWrongData]
gromacs-2021.3/python_packaging/src/gmxapi/export_context.cpp:92:21: style: Consider using std::copy algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/python_packaging/src/gmxapi/pycontext.cpp:103:53: style:inconclusive: Function 'addMDModule' argument 1 names different: declaration 'forceProvider' definition 'force_object'. [funcArgNamesDifferent]
gromacs-2021.3/python_packaging/src/gmxapi/pycontext.h:70:46: note: Function 'addMDModule' argument 1 names different: declaration 'forceProvider' definition 'force_object'.
gromacs-2021.3/python_packaging/src/gmxapi/pycontext.cpp:103:53: note: Function 'addMDModule' argument 1 names different: declaration 'forceProvider' definition 'force_object'.
gromacs-2021.3/src/api/cpp/tests/restraint.cpp:120:1: error: syntax error [syntaxError]
gromacs-2021.3/src/api/cpp/tests/runner.cpp:83:1: error: syntax error [syntaxError]
gromacs-2021.3/src/api/cpp/tests/stopsignaler.cpp:178:1: error: syntax error [syntaxError]
gromacs-2021.3/src/api/cpp/tests/version.cpp:67:1: error: syntax error [syntaxError]
gromacs-2021.3/src/api/cpp/workflow/tests/workflow.cpp:74:1: error: syntax error [syntaxError]
gromacs-2021.3/src/external/clFFT/src/library/lock.h:131:2: warning:inconclusive: Member variable 'lockRAII::mutex' is not assigned in the copy constructor. Should it be copied? [uninitMemberVarPrivate]
gromacs-2021.3/src/external/clFFT/src/library/lock.h:131:2: warning:inconclusive: Member variable 'lockRAII::mAttr' is not assigned in the copy constructor. Should it be copied? [uninitMemberVarPrivate]
gromacs-2021.3/src/external/clFFT/src/library/lock.h:131:2: warning:inconclusive: Member variable 'lockRAII::tstream' is not assigned in the copy constructor. Should it be copied? [uninitMemberVarPrivate]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:199:2: warning: Member variable 'FFTKernelGenKeyParams::nonSquareKernelOrder' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:199:2: warning: Member variable 'FFTKernelGenKeyParams::fft_preCallback' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:199:2: warning: Member variable 'FFTKernelGenKeyParams::fft_postCallback' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:528:2: warning: Member variable 'FFTPlan::preCallback' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:528:2: warning: Member variable 'FFTPlan::postCallbackParam' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:93:30: warning: Member variable 'CacheEntry::m_handle' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:195:53: warning: 'operator=' should check for assignment to self to avoid problems with dynamic memory. [operatorEqToSelf]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:462:18: style:inconclusive: Member variable 'FFTPlan::planTX' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:564:6: note: Member variable 'FFTPlan::planTX' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/plan.h:462:18: note: Member variable 'FFTPlan::planTX' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/plan.h:515:21: style:inconclusive: Member variable 'FFTPlan::plHandle' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:575:9: note: Member variable 'FFTPlan::plHandle' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/plan.h:515:21: note: Member variable 'FFTPlan::plHandle' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/plan.h:506:7: style:inconclusive: Member variable 'FFTPlan::hasPreCallback' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:576:6: note: Member variable 'FFTPlan::hasPreCallback' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/plan.h:506:7: note: Member variable 'FFTPlan::hasPreCallback' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.h:147:16: style:inconclusive: Technically the member function 'FFTBinaryLookup::getProgram' can be const. [functionConst]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:660:29: note: Technically the member function 'FFTBinaryLookup::getProgram' can be const.
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.h:147:16: note: Technically the member function 'FFTBinaryLookup::getProgram' can be const.
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.h:260:14: style:inconclusive: Technically the member function 'FFTBinaryLookup::CacheEntry::successful_creation' can be const. [functionConst]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:109:35: note: Technically the member function 'FFTBinaryLookup::CacheEntry::successful_creation' can be const.
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.h:260:14: note: Technically the member function 'FFTBinaryLookup::CacheEntry::successful_creation' can be const.
gromacs-2021.3/src/external/clFFT/src/library/private.h:120:3: style: Class 'tofstreamRAII' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/clFFT/src/library/lock.h:145:3: style: Class 'lockRAII' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.h:257:9: style: Struct 'CacheEntry' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:367:25: style: C-style pointer casting [cstyleCast]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:228:42: portability:inconclusive: Casting from double * to char * is not portable due to different binary data representations on different platforms. [invalidPointerCast]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:599:65: style:inconclusive: Function 'buildProgramFromSource' argument 1 names different: declaration 'filename' definition 'source'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.h:153:59: note: Function 'buildProgramFromSource' argument 1 names different: declaration 'filename' definition 'source'.
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:599:65: note: Function 'buildProgramFromSource' argument 1 names different: declaration 'filename' definition 'source'.
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:503:29: style: Local variable 'filename' shadows outer variable [shadowVariable]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:492:25: note: Shadowed declaration
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:503:29: note: Shadow variable
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:248:56: style: Parameter 'data' can be declared with const [constParameter]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:683:14: performance: Passing the result of c_str() to a function that takes std::string as argument no. 1 is slow and redundant. [stlcstrParam]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:731:9: performance: Passing the result of c_str() to a function that takes std::string as argument no. 1 is slow and redundant. [stlcstrParam]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:734:9: performance: Passing the result of c_str() to a function that takes std::string as argument no. 1 is slow and redundant. [stlcstrParam]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:737:9: performance: Passing the result of c_str() to a function that takes std::string as argument no. 1 is slow and redundant. [stlcstrParam]
gromacs-2021.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:740:9: performance: Passing the result of c_str() to a function that takes std::string as argument no. 1 is slow and redundant. [stlcstrParam]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::doubleNanoSec' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::batchSize' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::dim' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::plHandle' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::planX' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::planY' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::planZ' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::planTX' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::planTY' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::planTZ' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::planRCcopy' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::planCopy' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::gen' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::iDist' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::oDist' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:66:2: warning: Member variable 'StatData::placeness' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:69:2: warning: Member variable 'StatData::doubleNanoSec' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/library/lock.h:131:2: warning:inconclusive: Member variable 'lockRAII < false >::mutex' is not assigned in the copy constructor. Should it be copied? [uninitMemberVarPrivate]
gromacs-2021.3/src/external/clFFT/src/library/lock.h:131:2: warning:inconclusive: Member variable 'lockRAII < false >::mAttr' is not assigned in the copy constructor. Should it be copied? [uninitMemberVarPrivate]
gromacs-2021.3/src/external/clFFT/src/library/lock.h:131:2: warning:inconclusive: Member variable 'lockRAII < false >::tstream' is not assigned in the copy constructor. Should it be copied? [uninitMemberVarPrivate]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:38:12: style:inconclusive: Member variable 'StatData::kernel' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:71:22: note: Member variable 'StatData::kernel' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:38:12: note: Member variable 'StatData::kernel' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:56:24: style:inconclusive: Member variable 'StatData::lengths' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:76:3: note: Member variable 'StatData::lengths' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:56:24: note: Member variable 'StatData::lengths' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:62:24: style:inconclusive: Member variable 'StatData::enqueueLocalWorkSize' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:76:58: note: Member variable 'StatData::enqueueLocalWorkSize' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:62:24: note: Member variable 'StatData::enqueueLocalWorkSize' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:61:22: style:inconclusive: Member variable 'StatData::placeness' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:76:93: note: Member variable 'StatData::placeness' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:61:22: note: Member variable 'StatData::placeness' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/lock.h:145:3: style: Class 'lockRAII < false >' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:210:7: style: The function 'Start' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:67:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:210:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:217:7: style: The function 'Stop' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:74:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:217:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:231:7: style: The function 'Clear' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:81:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:231:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:238:7: style: The function 'Reset' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:88:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:238:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:240:7: style: The function 'Reserve' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:90:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:240:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:242:9: style: The function 'getUniqueID' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:92:17: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:242:9: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:245:7: style: The function 'setNormalize' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:95:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:245:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:247:7: style: The function 'Print' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:97:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:247:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:252:9: style: The function 'pruneOutliers' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:102:17: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:252:9: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:253:24: style: The function 'pruneOutliers' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:103:32: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:253:24: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/accessors.cpp:120:27: style: Redundant condition: If 'dir == -1', the comparison 'dir == -1' is always true. [redundantCondition]
gromacs-2021.3/src/external/clFFT/src/library/accessors.cpp:143:27: style: Redundant condition: If 'dir == -1', the comparison 'dir == -1' is always true. [redundantCondition]
gromacs-2021.3/src/external/clFFT/src/library/repo.h:58:26: style: C-style pointer casting [cstyleCast]
gromacs-2021.3/src/external/clFFT/src/library/accessors.cpp:772:50: style: Parameter 'userdata' can be declared with const [constParameter]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:348:44: performance:inconclusive: Technically the member function 'FFTAction::writeKernel' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/external/clFFT/src/library/enqueue.cpp:672:24: note: Technically the member function 'FFTAction::writeKernel' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/external/clFFT/src/library/plan.h:348:44: note: Technically the member function 'FFTAction::writeKernel' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/external/clFFT/src/library/plan.h:359:17: performance:inconclusive: Technically the member function 'FFTAction::selectBufferArguments' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/external/clFFT/src/library/enqueue.cpp:100:24: note: Technically the member function 'FFTAction::selectBufferArguments' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/external/clFFT/src/library/plan.h:359:17: note: Technically the member function 'FFTAction::selectBufferArguments' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.h:236:4: warning: Class 'TwiddleTableLarge' does not have a copy constructor which is recommended since it has dynamic memory/resource allocation(s). [noCopyConstructor]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.h:236:4: warning: Class 'TwiddleTableLarge' does not have a operator= which is recommended since it has dynamic memory/resource allocation(s). [noOperatorEq]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.h:229:3: style: Class 'TwiddleTableLarge' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/clFFT/src/library/private.h:120:3: style: Class 'tofstreamRAII < std :: ofstream , std :: string >' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/clFFT/src/library/action.h:37:21: style: The function 'getGenerator' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:345:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:37:21: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:53:21: style: The function 'getGenerator' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:345:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:53:21: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:71:21: style: The function 'getGenerator' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:345:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:71:21: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:86:21: style: The function 'getGenerator' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:345:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:86:21: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:101:21: style: The function 'getGenerator' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:345:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:101:21: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:131:17: style: The function 'generateKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:350:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:131:17: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:132:17: style: The function 'getWorkSizes' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:351:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:132:17: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:135:10: style: The function 'buildForwardKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:365:18: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:135:10: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:136:10: style: The function 'buildBackwardKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:366:18: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:136:10: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:173:17: style: The function 'generateKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:350:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:173:17: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:174:17: style: The function 'getWorkSizes' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:351:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:174:17: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:177:10: style: The function 'buildForwardKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:365:18: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:177:10: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:178:10: style: The function 'buildBackwardKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:366:18: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:178:10: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:217:17: style: The function 'generateKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:350:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:217:17: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:218:17: style: The function 'getWorkSizes' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:351:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:218:17: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:221:10: style: The function 'buildForwardKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:365:18: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:221:10: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:222:10: style: The function 'buildBackwardKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:366:18: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:222:10: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:259:17: style: The function 'generateKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:350:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:259:17: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:260:17: style: The function 'getWorkSizes' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:351:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:260:17: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:263:10: style: The function 'buildForwardKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:365:18: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:263:10: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:264:10: style: The function 'buildBackwardKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:366:18: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:264:10: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:300:17: style: The function 'generateKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:350:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:300:17: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:301:17: style: The function 'getWorkSizes' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:351:44: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:301:17: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:304:10: style: The function 'buildForwardKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:365:18: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:304:10: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/action.h:305:10: style: The function 'buildBackwardKernel' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:366:18: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/library/action.h:305:10: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.h:892:25: style: The scope of the variable 'C7SFR' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.h:991:25: style: The scope of the variable 'C7SBR' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.h:1090:25: style: The scope of the variable 'C7SFC' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.h:1151:25: style: The scope of the variable 'C7SBC' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/enqueue.cpp:94:32: style:inconclusive: Function 'FFTAction' argument 1 names different: declaration 'plan' definition 'fftPlan'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:331:25: note: Function 'FFTAction' argument 1 names different: declaration 'plan' definition 'fftPlan'.
gromacs-2021.3/src/external/clFFT/src/library/enqueue.cpp:94:32: note: Function 'FFTAction' argument 1 names different: declaration 'plan' definition 'fftPlan'.
gromacs-2021.3/src/external/clFFT/src/library/enqueue.cpp:100:56: style:inconclusive: Function 'selectBufferArguments' argument 1 names different: declaration 'plan' definition 'fftPlan'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/plan.h:359:49: note: Function 'selectBufferArguments' argument 1 names different: declaration 'plan' definition 'fftPlan'.
gromacs-2021.3/src/external/clFFT/src/library/enqueue.cpp:100:56: note: Function 'selectBufferArguments' argument 1 names different: declaration 'plan' definition 'fftPlan'.
gromacs-2021.3/src/external/clFFT/src/library/generator.copy.cpp:102:22: style:inconclusive: Technically the member function 'CopyKernel < P_SINGLE >::OffsetCalc' can be const. [functionConst]
gromacs-2021.3/src/external/clFFT/src/library/generator.copy.cpp:102:22: style:inconclusive: Technically the member function 'CopyKernel < P_DOUBLE >::OffsetCalc' can be const. [functionConst]
gromacs-2021.3/src/external/clFFT/src/library/generator.copy.cpp:127:9: style: Class 'CopyKernel < P_SINGLE >' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/clFFT/src/library/generator.copy.cpp:127:9: style: Class 'CopyKernel < P_DOUBLE >' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/clFFT/src/library/generator.copy.cpp:582:73: style:inconclusive: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/action.h:132:56: note: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'.
gromacs-2021.3/src/external/clFFT/src/library/generator.copy.cpp:582:73: note: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'.
gromacs-2021.3/src/external/clFFT/src/library/generator.copy.cpp:582:105: style:inconclusive: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/action.h:132:88: note: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'.
gromacs-2021.3/src/external/clFFT/src/library/generator.copy.cpp:582:105: note: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'.
gromacs-2021.3/src/external/clFFT/src/library/generator.copy.cpp:162:20: style: Variable 'sfx' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/clFFT/src/library/generator.copy.cpp:327:11: style: Variable 'inF2' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:481:5: style:inconclusive: Found duplicate branches for 'if' and 'else'. [duplicateBranch]
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:483:5: note: Found duplicate branches for 'if' and 'else'.
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:481:5: note: Found duplicate branches for 'if' and 'else'.
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:339:87: style:inconclusive: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/action.h:301:52: note: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'.
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:339:87: note: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'.
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:339:120: style:inconclusive: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/action.h:301:84: note: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'.
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:339:120: note: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'.
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:725:84: style:inconclusive: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/action.h:260:56: note: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'.
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:725:84: note: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'.
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:725:117: style:inconclusive: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/action.h:260:88: note: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'.
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:725:117: note: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'.
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:480:12: style: Local variable 'global_item_size' shadows outer variable [shadowVariable]
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:346:12: note: Shadowed declaration
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:480:12: note: Shadow variable
gromacs-2021.3/src/external/clFFT/src/library/action.transpose.cpp:434:25: style: Variable 'num_elements_loaded' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/clFFT/src/include/sharedLibrary.h:64:0: error: #error "unsupported platform" [preprocessorErrorDirective]
gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:263:22: warning: Either the condition 'available<8' is redundant or the array 'ctx->buffer[64]' is accessed at index 71, which is out of bounds. [arrayIndexOutOfBoundsCond]
gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:262:16: note: Assuming that condition 'available<8' is not redundant
gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:260:12: note: available is assigned '64-used' here.
gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:263:22: note: Array index out of bounds
gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:104:14: style: The scope of the variable 'saved_a' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:104:23: style: The scope of the variable 'saved_b' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:104:32: style: The scope of the variable 'saved_c' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:104:41: style: The scope of the variable 'saved_d' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:221:22: style: The scope of the variable 'available' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:305:59: style:inconclusive: Function 'md5sum' argument 3 names different: declaration 'md5sum' definition 'md5string'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/md5sum.h:49:60: note: Function 'md5sum' argument 3 names different: declaration 'md5sum' definition 'md5string'.
gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:305:59: note: Function 'md5sum' argument 3 names different: declaration 'md5sum' definition 'md5string'.
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.gcn.cpp:1200:82: style:inconclusive: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/action.h:218:56: note: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'.
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.gcn.cpp:1200:82: note: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'.
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.gcn.cpp:1200:115: style:inconclusive: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/action.h:218:88: note: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'.
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.gcn.cpp:1200:115: note: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'.
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.gcn.cpp:106:16: style: struct member 'tile::col' is never used. [unusedStructMember]
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.gcn.cpp:112:16: style: struct member 'tile::row' is never used. [unusedStructMember]
gromacs-2021.3/src/external/clFFT/src/library/repo.cpp:361:14: style: Local variable 'sLock' shadows outer variable [shadowVariable]
gromacs-2021.3/src/external/clFFT/src/library/repo.cpp:352:13: note: Shadowed declaration
gromacs-2021.3/src/external/clFFT/src/library/repo.cpp:361:14: note: Shadow variable
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.cpp:110:2: performance: Variable 'clkFrequency' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.cpp:116:3: performance: Variable 'clkFrequency' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.cpp:82:7: style:inconclusive: Technically the member function 'PruneRange::operator()' can be const. [functionConst]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:134:7: style: The function 'Start' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:67:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:134:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:141:7: style: The function 'Stop' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:74:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:141:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:148:7: style: The function 'Clear' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:81:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:148:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:155:7: style: The function 'Reset' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:88:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:155:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:157:7: style: The function 'Reserve' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:90:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:157:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:159:9: style: The function 'getUniqueID' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:92:17: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:159:9: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:162:7: style: The function 'setNormalize' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:95:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:162:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:164:7: style: The function 'Print' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:97:15: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:164:7: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:169:9: style: The function 'pruneOutliers' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:102:17: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:169:9: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:170:24: style: The function 'pruneOutliers' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.h:103:32: note: Virtual function in base class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:170:24: note: Function in derived class
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:137:9: style:inconclusive: Member variable 'GpuStatTimer::currSample' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:139:74: note: Member variable 'GpuStatTimer::currSample' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:137:9: note: Member variable 'GpuStatTimer::currSample' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:163:31: style:inconclusive: Function 'Reserve' argument 1 names different: declaration 'nEvents' definition 'nE'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:240:23: note: Function 'Reserve' argument 1 names different: declaration 'nEvents' definition 'nE'.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:163:31: note: Function 'Reserve' argument 1 names different: declaration 'nEvents' definition 'nE'.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:163:42: style:inconclusive: Function 'Reserve' argument 2 names different: declaration 'nSamples' definition 'nS'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:240:39: note: Function 'Reserve' argument 2 names different: declaration 'nSamples' definition 'nS'.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:163:42: note: Function 'Reserve' argument 2 names different: declaration 'nSamples' definition 'nS'.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:204:91: style:inconclusive: Function 'AddSample' argument 4 names different: declaration 'numQueuesAndEvents' definition 'numEvents'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:223:91: note: Function 'AddSample' argument 4 names different: declaration 'numQueuesAndEvents' definition 'numEvents'.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:204:91: note: Function 'AddSample' argument 4 names different: declaration 'numQueuesAndEvents' definition 'numEvents'.
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:108:23: performance: Function parameter 'm' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:418:23: style: Variable 'tableThird' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:419:24: style: Variable 'tableFourth' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:420:23: style: Variable 'tableFifth' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:26:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:27:11: style: The scope of the variable 'ti2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:27:16: style: The scope of the variable 'tr2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:60:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:61:21: style: The scope of the variable 'di2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:61:26: style: The scope of the variable 'di3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:61:41: style: The scope of the variable 'dr2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:61:46: style: The scope of the variable 'dr3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:112:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:113:11: style: The scope of the variable 'ci2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:113:16: style: The scope of the variable 'ci3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:113:21: style: The scope of the variable 'ci4' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:113:26: style: The scope of the variable 'cr2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:113:31: style: The scope of the variable 'cr3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:113:36: style: The scope of the variable 'cr4' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:176:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:177:31: style: The scope of the variable 'di3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:177:36: style: The scope of the variable 'di4' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:177:41: style: The scope of the variable 'di5' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:177:46: style: The scope of the variable 'di2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:178:19: style: The scope of the variable 'dr3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:178:24: style: The scope of the variable 'dr4' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:178:29: style: The scope of the variable 'dr5' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:178:34: style: The scope of the variable 'dr2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:262:15: style: The scope of the variable 'idlj' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:262:49: style: The scope of the variable 'lc' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:262:57: style: The scope of the variable 'idj' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:391:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:391:15: style: The scope of the variable 'ic' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:392:11: style: The scope of the variable 'ti2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:392:16: style: The scope of the variable 'tr2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:423:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:423:15: style: The scope of the variable 'ic' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:424:11: style: The scope of the variable 'ti2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:424:16: style: The scope of the variable 'tr2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:540:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:540:15: style: The scope of the variable 'ic' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:541:11: style: The scope of the variable 'ci2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:541:16: style: The scope of the variable 'ci3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:541:21: style: The scope of the variable 'ci4' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:541:26: style: The scope of the variable 'cr2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:541:31: style: The scope of the variable 'cr3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:541:36: style: The scope of the variable 'cr4' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:541:46: style: The scope of the variable 'ti2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:541:51: style: The scope of the variable 'ti3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:541:56: style: The scope of the variable 'ti4' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:541:71: style: The scope of the variable 'tr3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:541:76: style: The scope of the variable 'tr4' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:600:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:600:15: style: The scope of the variable 'ic' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:601:11: style: The scope of the variable 'ci2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:601:16: style: The scope of the variable 'ci3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:601:21: style: The scope of the variable 'ci4' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:601:26: style: The scope of the variable 'cr2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:601:31: style: The scope of the variable 'cr3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:601:36: style: The scope of the variable 'cr4' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:601:51: style: The scope of the variable 'ti3' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:601:56: style: The scope of the variable 'ti4' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:794:9: style: The scope of the variable 'idij' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:794:45: style: The scope of the variable 'lc' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:794:53: style: The scope of the variable 'is' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:795:11: style: The scope of the variable 'dc2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:795:21: style: The scope of the variable 'ai2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:795:31: style: The scope of the variable 'ar2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:795:36: style: The scope of the variable 'ds2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:795:56: style: The scope of the variable 'ar1h' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:964:33: style: The scope of the variable 'j2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:964:37: style: The scope of the variable 'ic' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:964:45: style: The scope of the variable 'lc' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:965:11: style: The scope of the variable 'dc2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:965:21: style: The scope of the variable 'ai2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:965:31: style: The scope of the variable 'ar2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:965:36: style: The scope of the variable 'ds2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:967:26: style: The scope of the variable 'ar1h' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1140:9: style: The scope of the variable 'idot' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1141:17: style: The scope of the variable 'l2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1142:17: style: The scope of the variable 'ip' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1142:45: style: The scope of the variable 'ido' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1142:50: style: The scope of the variable 'idl1' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1232:9: style: The scope of the variable 'idot' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1233:21: style: The scope of the variable 'l2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1234:9: style: The scope of the variable 'ld' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1234:21: style: The scope of the variable 'ip' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1235:9: style: The scope of the variable 'ido' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1235:14: style: The scope of the variable 'ipm' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1282:13: style: The scope of the variable 'l1' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1282:25: style: The scope of the variable 'kh' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1282:33: style: The scope of the variable 'ip' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1282:56: style: The scope of the variable 'ido' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1282:61: style: The scope of the variable 'idl1' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1343:17: style: The scope of the variable 'l2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1343:29: style: The scope of the variable 'ip' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1343:52: style: The scope of the variable 'ido' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1343:57: style: The scope of the variable 'idl1' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1401:17: style: The scope of the variable 'l2' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1402:9: style: The scope of the variable 'ld' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1402:21: style: The scope of the variable 'ip' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1403:9: style: The scope of the variable 'ido' can be reduced. [variableScope]
gromacs-2021.3/src/external/fftpack/fftpack.cpp:1403:14: style: The scope of the variable 'ipm' can be reduced. [variableScope]
gromacs-2021.3/src/external/googletest/googlemock/src/gmock-spec-builders.cc:592:13: style:inconclusive: Technically the member function 'testing::::MockObjectRegistry::states' can be const. [functionConst]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:5143:22: style: Condition 'in_subprocess_for_death_test' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:5103:39: note: Assignment 'in_subprocess_for_death_test=false', assigned value is 0
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:5124:17: note: Assuming condition is false
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:5143:22: note: Condition 'in_subprocess_for_death_test' is always false
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:4685:34: error: Null pointer dereference: static_cast<volatile int*>(NULL) [nullPointer]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3382:1: style:inconclusive: Function 'OnTestProgramStart' argument 1 names different: declaration 'unit_test' definition 'parameter'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3317:51: note: Function 'OnTestProgramStart' argument 1 names different: declaration 'unit_test' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3382:1: note: Function 'OnTestProgramStart' argument 1 names different: declaration 'unit_test' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3383:1: style:inconclusive: Function 'OnEnvironmentsSetUpStart' argument 1 names different: declaration 'unit_test' definition 'parameter'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3319:57: note: Function 'OnEnvironmentsSetUpStart' argument 1 names different: declaration 'unit_test' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3383:1: note: Function 'OnEnvironmentsSetUpStart' argument 1 names different: declaration 'unit_test' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3384:1: style:inconclusive: Function 'OnTestCaseStart' argument 1 names different: declaration 'test_case' definition 'parameter'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3321:48: note: Function 'OnTestCaseStart' argument 1 names different: declaration 'test_case' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3384:1: note: Function 'OnTestCaseStart' argument 1 names different: declaration 'test_case' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3385:1: style:inconclusive: Function 'OnTestStart' argument 1 names different: declaration 'test_info' definition 'parameter'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3322:44: note: Function 'OnTestStart' argument 1 names different: declaration 'test_info' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3385:1: note: Function 'OnTestStart' argument 1 names different: declaration 'test_info' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3386:1: style:inconclusive: Function 'OnTestPartResult' argument 1 names different: declaration 'result' definition 'parameter'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3323:55: note: Function 'OnTestPartResult' argument 1 names different: declaration 'result' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3386:1: note: Function 'OnTestPartResult' argument 1 names different: declaration 'result' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3387:1: style:inconclusive: Function 'OnEnvironmentsTearDownStart' argument 1 names different: declaration 'unit_test' definition 'parameter'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3326:60: note: Function 'OnEnvironmentsTearDownStart' argument 1 names different: declaration 'unit_test' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3387:1: note: Function 'OnEnvironmentsTearDownStart' argument 1 names different: declaration 'unit_test' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3388:1: style:inconclusive: Function 'OnEnvironmentsSetUpEnd' argument 1 names different: declaration 'unit_test' definition 'parameter'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3320:55: note: Function 'OnEnvironmentsSetUpEnd' argument 1 names different: declaration 'unit_test' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3388:1: note: Function 'OnEnvironmentsSetUpEnd' argument 1 names different: declaration 'unit_test' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3389:1: style:inconclusive: Function 'OnEnvironmentsTearDownEnd' argument 1 names different: declaration 'unit_test' definition 'parameter'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3327:58: note: Function 'OnEnvironmentsTearDownEnd' argument 1 names different: declaration 'unit_test' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3389:1: note: Function 'OnEnvironmentsTearDownEnd' argument 1 names different: declaration 'unit_test' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3390:1: style:inconclusive: Function 'OnTestEnd' argument 1 names different: declaration 'test_info' definition 'parameter'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3324:42: note: Function 'OnTestEnd' argument 1 names different: declaration 'test_info' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3390:1: note: Function 'OnTestEnd' argument 1 names different: declaration 'test_info' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3391:1: style:inconclusive: Function 'OnTestCaseEnd' argument 1 names different: declaration 'test_case' definition 'parameter'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3325:46: note: Function 'OnTestCaseEnd' argument 1 names different: declaration 'test_case' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3391:1: note: Function 'OnTestCaseEnd' argument 1 names different: declaration 'test_case' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3392:1: style:inconclusive: Function 'OnTestProgramEnd' argument 1 names different: declaration 'unit_test' definition 'parameter'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3329:49: note: Function 'OnTestProgramEnd' argument 1 names different: declaration 'unit_test' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3392:1: note: Function 'OnTestProgramEnd' argument 1 names different: declaration 'unit_test' definition 'parameter'.
gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:3735:18: performance: Passing the result of c_str() to a function that takes std::string as argument no. 1 is slow and redundant. [stlcstrParam]
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.cpp:1727:21: style: Expression is always true because 'else if' condition is opposite to previous condition at line 1656. [multiCondition]
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.cpp:1656:17: note: first condition
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.cpp:1727:21: note: else if condition is opposite to first condition
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.cpp:1840:13: style: Expression is always true because 'else if' condition is opposite to previous condition at line 1771. [multiCondition]
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.cpp:1771:17: note: first condition
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.cpp:1840:13: note: else if condition is opposite to first condition
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.cpp:331:9: style: The scope of the variable 'swap_id' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.cpp:585:19: style: The scope of the variable 'start_inx' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.cpp:947:14: style: Unused variable: tmpBuffType [unusedVariable]
gromacs-2021.3/src/external/clFFT/src/library/generator.transpose.cpp:1067:116: performance: Prefer prefix ++/-- operators for non-primitive types. [postfixOperator]
gromacs-2021.3/src/external/thread_mpi/src/alltoall.cpp:173:57: style: Parameter 'sdispls' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/alltoall.cpp:175:57: style: Parameter 'rdispls' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/collective.cpp:196:9: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/collective.cpp:440:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/collective.cpp:193:41: style:inconclusive: Function 'tMPI_Coll_env_init' argument 1 names different: declaration 'mev' definition 'cev'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/thread_mpi/src/impl.h:800:41: note: Function 'tMPI_Coll_env_init' argument 1 names different: declaration 'mev' definition 'cev'.
gromacs-2021.3/src/external/thread_mpi/src/collective.cpp:193:41: note: Function 'tMPI_Coll_env_init' argument 1 names different: declaration 'mev' definition 'cev'.
gromacs-2021.3/src/external/thread_mpi/src/collective.cpp:218:45: style:inconclusive: Function 'tMPI_Coll_env_destroy' argument 1 names different: declaration 'mev' definition 'cev'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/thread_mpi/src/impl.h:802:45: note: Function 'tMPI_Coll_env_destroy' argument 1 names different: declaration 'mev' definition 'cev'.
gromacs-2021.3/src/external/thread_mpi/src/collective.cpp:218:45: note: Function 'tMPI_Coll_env_destroy' argument 1 names different: declaration 'mev' definition 'cev'.
gromacs-2021.3/src/external/thread_mpi/src/collective.cpp:228:43: style:inconclusive: Function 'tMPI_Coll_sync_init' argument 1 names different: declaration 'msc' definition 'csync'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/thread_mpi/src/impl.h:805:43: note: Function 'tMPI_Coll_sync_init' argument 1 names different: declaration 'msc' definition 'csync'.
gromacs-2021.3/src/external/thread_mpi/src/collective.cpp:228:43: note: Function 'tMPI_Coll_sync_init' argument 1 names different: declaration 'msc' definition 'csync'.
gromacs-2021.3/src/external/thread_mpi/src/collective.cpp:248:47: style:inconclusive: Function 'tMPI_Coll_sync_destroy' argument 1 names different: declaration 'msc' definition 'csync'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/thread_mpi/src/impl.h:807:47: note: Function 'tMPI_Coll_sync_destroy' argument 1 names different: declaration 'msc' definition 'csync'.
gromacs-2021.3/src/external/thread_mpi/src/collective.cpp:248:47: note: Function 'tMPI_Coll_sync_destroy' argument 1 names different: declaration 'msc' definition 'csync'.
gromacs-2021.3/src/external/thread_mpi/src/collective.cpp:263:64: style:inconclusive: Function 'tMPI_Get_cev' argument 3 names different: declaration 'synct' definition 'counter'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/thread_mpi/src/collective.h:40:64: note: Function 'tMPI_Get_cev' argument 3 names different: declaration 'synct' definition 'counter'.
gromacs-2021.3/src/external/thread_mpi/src/collective.cpp:263:64: note: Function 'tMPI_Get_cev' argument 3 names different: declaration 'synct' definition 'counter'.
gromacs-2021.3/src/external/thread_mpi/src/comm.cpp:414:9: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/comm.cpp:555:25: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/comm.cpp:555:28: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/comm.cpp:774:61: style: Parameter 'th' can be declared with const [constParameter]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:214:20: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:215:20: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:216:20: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:217:20: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:218:20: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:219:20: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:220:20: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:221:20: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:681:24: style: The scope of the variable 'fp_old' can be reduced. [variableScope]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:681:39: style: The scope of the variable 'parc' can be reduced. [variableScope]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:874:18: style: The scope of the variable 'kmax' can be reduced. [variableScope]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:875:12: style: The scope of the variable 'ajnorm' can be reduced. [variableScope]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:1164:32: style: The scope of the variable 'xabs' can be reduced. [variableScope]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:1241:32: style: The scope of the variable 'xabs' can be reduced. [variableScope]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:832:45: style:inconclusive: Function 'lm_qrfac' argument 3 names different: declaration 'a' definition 'A'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:36:45: note: Function 'lm_qrfac' argument 3 names different: declaration 'a' definition 'A'.
gromacs-2021.3/src/external/lmfit/lmmin.cpp:832:45: note: Function 'lm_qrfac' argument 3 names different: declaration 'a' definition 'A'.
gromacs-2021.3/src/external/lmfit/lmmin.cpp:832:59: style:inconclusive: Function 'lm_qrfac' argument 4 names different: declaration 'ipvt' definition 'Pivot'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:36:59: note: Function 'lm_qrfac' argument 4 names different: declaration 'ipvt' definition 'Pivot'.
gromacs-2021.3/src/external/lmfit/lmmin.cpp:832:59: note: Function 'lm_qrfac' argument 4 names different: declaration 'ipvt' definition 'Pivot'.
gromacs-2021.3/src/external/lmfit/lmmin.cpp:833:19: style:inconclusive: Function 'lm_qrfac' argument 5 names different: declaration 'rdiag' definition 'Rdiag'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:37:19: note: Function 'lm_qrfac' argument 5 names different: declaration 'rdiag' definition 'Rdiag'.
gromacs-2021.3/src/external/lmfit/lmmin.cpp:833:19: note: Function 'lm_qrfac' argument 5 names different: declaration 'rdiag' definition 'Rdiag'.
gromacs-2021.3/src/external/lmfit/lmmin.cpp:833:40: style:inconclusive: Function 'lm_qrfac' argument 6 names different: declaration 'acnorm' definition 'Acnorm'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:37:40: note: Function 'lm_qrfac' argument 6 names different: declaration 'acnorm' definition 'Acnorm'.
gromacs-2021.3/src/external/lmfit/lmmin.cpp:833:40: note: Function 'lm_qrfac' argument 6 names different: declaration 'acnorm' definition 'Acnorm'.
gromacs-2021.3/src/external/lmfit/lmmin.cpp:833:62: style:inconclusive: Function 'lm_qrfac' argument 7 names different: declaration 'wa' definition 'W'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/lmfit/lmmin.cpp:37:62: note: Function 'lm_qrfac' argument 7 names different: declaration 'wa' definition 'W'.
gromacs-2021.3/src/external/lmfit/lmmin.cpp:833:62: note: Function 'lm_qrfac' argument 7 names different: declaration 'wa' definition 'W'.
gromacs-2021.3/src/external/thread_mpi/src/errhandler.cpp:212:42: style: Parameter 'comm' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/errhandler.cpp:230:39: style: Parameter 'comm' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/errhandler.cpp:160:48: style: Parameter 'function' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/group.cpp:181:51: style: Parameter 'ranks' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/gather.cpp:169:55: style: Parameter 'displs' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:964:25: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:1060:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:1113:34: style: The scope of the variable 'rev' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:332:56: style:inconclusive: Function 'tMPI_Send_env_list_return' argument 1 names different: declaration 'ev' definition 'sev'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:79:56: note: Function 'tMPI_Send_env_list_return' argument 1 names different: declaration 'ev' definition 'sev'.
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:332:56: note: Function 'tMPI_Send_env_list_return' argument 1 names different: declaration 'ev' definition 'sev'.
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:469:63: style:inconclusive: Function 'tMPI_Recv_env_list_add' argument 2 names different: declaration 'ev' definition 'rev'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:109:63: note: Function 'tMPI_Recv_env_list_add' argument 2 names different: declaration 'ev' definition 'rev'.
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:469:63: note: Function 'tMPI_Recv_env_list_add' argument 2 names different: declaration 'ev' definition 'rev'.
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:480:56: style:inconclusive: Function 'tMPI_Recv_env_list_remove' argument 1 names different: declaration 'ev' definition 'rev'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:111:56: note: Function 'tMPI_Recv_env_list_remove' argument 1 names different: declaration 'ev' definition 'rev'.
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:480:56: note: Function 'tMPI_Recv_env_list_remove' argument 1 names different: declaration 'ev' definition 'rev'.
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:1058:53: style:inconclusive: Function 'tMPI_Wait_process_incoming' argument 1 names different: declaration 'th' definition 'cur'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/thread_mpi/src/p2p.h:50:53: note: Function 'tMPI_Wait_process_incoming' argument 1 names different: declaration 'th' definition 'cur'.
gromacs-2021.3/src/external/thread_mpi/src/p2p_protocol.cpp:1058:53: note: Function 'tMPI_Wait_process_incoming' argument 1 names different: declaration 'th' definition 'cur'.
gromacs-2021.3/src/external/thread_mpi/src/p2p_wait.cpp:176:58: style: Parameter 'array_of_requests' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/reduce.cpp:133:19: style: The scope of the variable 'a' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/reduce.cpp:133:23: style: The scope of the variable 'b' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/reduce.cpp:134:19: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/scatter.cpp:198:62: style: Parameter 'displs' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/scatter.cpp:93:35: style: Variable 'total_send_size' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/thread_mpi/src/scatter.cpp:110:40: style: Variable 'total_send_size' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/thread_mpi/src/scatter.cpp:230:35: style: Variable 'total_send_size' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/thread_mpi/src/scatter.cpp:247:40: style: Variable 'total_send_size' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/thread_mpi/src/tmpi_init.cpp:416:9: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/tmpi_init.cpp:548:9: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/tmpi_init.cpp:580:9: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/tmpi_init.cpp:619:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/tmpi_init.cpp:412:29: style: Parameter 'argc' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/tmpi_init.cpp:169:21: style: Parameter 'argc' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/topology.cpp:263:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/topology.cpp:363:10: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/external/thread_mpi/src/topology.cpp:292:43: style:inconclusive: Function 'tMPI_Cart_destroy' argument 1 names different: declaration 'top' definition 'cart'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/thread_mpi/src/impl.h:758:43: note: Function 'tMPI_Cart_destroy' argument 1 names different: declaration 'top' definition 'cart'.
gromacs-2021.3/src/external/thread_mpi/src/topology.cpp:292:43: note: Function 'tMPI_Cart_destroy' argument 1 names different: declaration 'top' definition 'cart'.
gromacs-2021.3/src/external/thread_mpi/src/topology.cpp:139:41: style: Parameter 'coords' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/topology.cpp:216:51: style: Parameter 'dims' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/topology.cpp:216:62: style: Parameter 'periods' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/topology.cpp:259:66: style: Parameter 'dims' can be declared with const [constParameter]
gromacs-2021.3/src/external/thread_mpi/src/topology.cpp:260:33: style: Parameter 'periods' can be declared with const [constParameter]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:845:10: performance:inconclusive: Technically the member function 'tinyxml2::XMLNode::DeleteChild' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:699:15: note: Technically the member function 'tinyxml2::XMLNode::DeleteChild' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:845:10: note: Technically the member function 'tinyxml2::XMLNode::DeleteChild' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:911:10: performance:inconclusive: Technically the member function 'tinyxml2::XMLNode::InsertChildPreamble' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:940:15: note: Technically the member function 'tinyxml2::XMLNode::InsertChildPreamble' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:911:10: note: Technically the member function 'tinyxml2::XMLNode::InsertChildPreamble' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1611:14: style:inconclusive: Technically the member function 'tinyxml2::XMLDocument::SaveFile' can be const. [functionConst]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1883:23: note: Technically the member function 'tinyxml2::XMLDocument::SaveFile' can be const.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1611:14: note: Technically the member function 'tinyxml2::XMLDocument::SaveFile' can be const.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1700:10: performance:inconclusive: Technically the member function 'tinyxml2::XMLDocument::DeleteNode' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1800:19: note: Technically the member function 'tinyxml2::XMLDocument::DeleteNode' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1700:10: note: Technically the member function 'tinyxml2::XMLDocument::DeleteNode' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:263:8: style:inconclusive: Technically the member function 'DynArray < const char * , 10 >::operator[]' can be const. [functionConst]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:291:8: style:inconclusive: Technically the member function 'DynArray < const char * , 10 >::Mem' can be const. [functionConst]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:895:14: style: Virtual function 'XMLNode' is called from destructor '~XMLNode()' at line 643. Dynamic binding is not used. [virtualCallInConstructor]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:643:5: note: Calling DeleteChildren
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:672:9: note: Calling DeleteNode
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:936:12: note: Calling XMLNode
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:895:14: note: XMLNode is a virtual function
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:958:5: style: Class 'XMLText' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:988:5: style: Class 'XMLComment' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1026:5: style: Class 'XMLDeclaration' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1060:5: style: Class 'XMLUnknown' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1517:5: style: Class 'XMLElement' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1820:5: style: Class 'XMLHandle' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1824:5: style: Class 'XMLHandle' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1903:5: style: Class 'XMLConstHandle' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1906:5: style: Class 'XMLConstHandle' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:935:18: style: The function 'Accept' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:888:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:935:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:937:22: style: The function 'ToText' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:670:23: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:937:22: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:940:28: style: The function 'ToText' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:693:30: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:940:28: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:953:11: style: The function 'ParseDeep' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:891:19: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:953:11: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:954:22: style: The function 'ShallowClone' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:856:22: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:954:22: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:955:18: style: The function 'ShallowEqual' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:864:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:955:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:974:25: style: The function 'ToComment' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:674:26: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:974:25: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:977:31: style: The function 'ToComment' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:696:32: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:977:31: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:981:18: style: The function 'Accept' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:888:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:981:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:983:11: style: The function 'ParseDeep' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:891:19: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:983:11: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:984:22: style: The function 'ShallowClone' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:856:22: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:984:22: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:985:18: style: The function 'ShallowEqual' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:864:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:985:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1012:29: style: The function 'ToDeclaration' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:682:29: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1012:29: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1015:35: style: The function 'ToDeclaration' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:702:35: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1015:35: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1019:18: style: The function 'Accept' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:888:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1019:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1021:11: style: The function 'ParseDeep' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:891:19: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1021:11: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1022:22: style: The function 'ShallowClone' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:856:22: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1022:22: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1023:18: style: The function 'ShallowEqual' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:864:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1023:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1046:25: style: The function 'ToUnknown' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:686:26: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1046:25: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1049:31: style: The function 'ToUnknown' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:705:32: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1049:31: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1053:18: style: The function 'Accept' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:888:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1053:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1055:11: style: The function 'ParseDeep' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:891:19: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1055:11: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1056:22: style: The function 'ShallowClone' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:856:22: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1056:22: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1057:18: style: The function 'ShallowEqual' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:864:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1057:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1189:25: style: The function 'ToElement' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:666:26: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1189:25: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1192:31: style: The function 'ToElement' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:690:32: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1192:31: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1195:18: style: The function 'Accept' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:888:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1195:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1512:11: style: The function 'ParseDeep' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:891:19: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1512:11: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1513:22: style: The function 'ShallowClone' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:856:22: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1513:22: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1514:18: style: The function 'ShallowEqual' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:864:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1514:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1558:26: style: The function 'ToDocument' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:678:26: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1558:26: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1561:32: style: The function 'ToDocument' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:699:33: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1561:32: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1657:18: style: The function 'Accept' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:888:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1657:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1731:22: style: The function 'ShallowClone' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:856:22: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1731:22: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1734:18: style: The function 'ShallowEqual' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:864:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1734:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2053:18: style: The function 'VisitEnter' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:478:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2053:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2054:18: style: The function 'VisitExit' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:482:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2054:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2058:18: style: The function 'VisitEnter' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:487:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2058:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2059:18: style: The function 'VisitExit' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:491:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2059:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2061:18: style: The function 'Visit' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:500:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2061:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2062:18: style: The function 'Visit' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:504:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2062:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2063:18: style: The function 'Visit' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:496:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2063:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2064:18: style: The function 'Visit' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:508:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2064:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:351:10: style: The function 'Clear' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:335:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:351:10: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:364:17: style: The function 'ItemSize' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:331:17: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:364:17: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:371:19: style: The function 'Alloc' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:332:19: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:371:19: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:395:18: style: The function 'Free' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:333:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:395:18: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:412:10: style: The function 'SetTracked' overrides a function in a base class but is not marked with a 'override' specifier. [missingOverride]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:334:18: note: Virtual function in base class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:412:10: note: Function in derived class
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:372:21: style: Condition '*(p+2)=='x'' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:365:27: note: Assuming condition '*(p+2)' is true
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:372:21: note: Condition '*(p+2)=='x'' is always false
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:417:18: style: Condition '!(*q)' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:365:27: note: Assuming condition '*(p+2)' is true
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:417:18: note: Condition '!(*q)' is always false
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:408:9: portability: %d in format string (no. 3) requires 'int' but the argument type is 'size_t {aka unsigned long}'. [invalidPrintfArgType_sint]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:408:9: portability: %d in format string (no. 5) requires 'int' but the argument type is 'size_t {aka unsigned long}'. [invalidPrintfArgType_sint]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:122:33: style:inconclusive: Function 'ParseText' argument 1 names different: declaration 'in' definition 'p'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:185:28: note: Function 'ParseText' argument 1 names different: declaration 'in' definition 'p'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:122:33: note: Function 'ParseText' argument 1 names different: declaration 'in' definition 'p'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:142:33: style:inconclusive: Function 'ParseName' argument 1 names different: declaration 'in' definition 'p'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:186:28: note: Function 'ParseName' argument 1 names different: declaration 'in' definition 'p'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:142:33: note: Function 'ParseName' argument 1 names different: declaration 'in' definition 'p'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:293:52: style:inconclusive: Function 'ReadBOM' argument 2 names different: declaration 'hasBOM' definition 'bom'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:603:54: note: Function 'ReadBOM' argument 2 names different: declaration 'hasBOM' definition 'bom'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:293:52: note: Function 'ReadBOM' argument 2 names different: declaration 'hasBOM' definition 'bom'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:654:37: style:inconclusive: Function 'SetValue' argument 1 names different: declaration 'val' definition 'str'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:723:32: note: Function 'SetValue' argument 1 names different: declaration 'val' definition 'str'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:654:37: note: Function 'SetValue' argument 1 names different: declaration 'val' definition 'str'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:980:46: style:inconclusive: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:954:49: note: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:980:46: note: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1029:49: style:inconclusive: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:984:49: note: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1029:49: note: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1079:53: style:inconclusive: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1022:49: note: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1079:53: note: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1129:49: style:inconclusive: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1056:49: note: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1129:49: note: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1193:41: style:inconclusive: Function 'SetName' argument 1 names different: declaration 'name' definition 'n'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1160:31: note: Function 'SetName' argument 1 names different: declaration 'name' definition 'n'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1193:41: note: Function 'SetName' argument 1 names different: declaration 'name' definition 'n'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1244:46: style:inconclusive: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1140:36: note: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1244:46: note: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1250:38: style:inconclusive: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1142:28: note: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1250:38: note: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1258:43: style:inconclusive: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1144:33: note: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1258:43: note: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1266:39: style:inconclusive: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1146:29: note: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1266:39: note: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1273:41: style:inconclusive: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1148:31: note: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1273:41: note: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1280:40: style:inconclusive: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1150:30: note: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1280:40: note: Function 'SetAttribute' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1350:31: style:inconclusive: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1457:23: note: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1350:31: note: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1358:36: style:inconclusive: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1459:28: note: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1358:36: note: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1366:32: style:inconclusive: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1461:24: note: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1366:32: note: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1374:33: style:inconclusive: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1465:25: note: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1374:33: note: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1382:34: style:inconclusive: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1463:26: note: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1382:34: note: Function 'SetText' argument 1 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1574:48: style:inconclusive: Function 'ParseDeep' argument 2 names different: declaration 'endTag' definition 'strPair'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1512:40: note: Function 'ParseDeep' argument 2 names different: declaration 'endTag' definition 'strPair'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1574:48: note: Function 'ParseDeep' argument 2 names different: declaration 'endTag' definition 'strPair'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1603:49: style:inconclusive: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1513:49: note: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1603:49: note: Function 'ShallowClone' argument 1 names different: declaration 'document' definition 'doc'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1745:50: style:inconclusive: Function 'NewComment' argument 1 names different: declaration 'comment' definition 'str'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1670:41: note: Function 'NewComment' argument 1 names different: declaration 'comment' definition 'str'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1745:50: note: Function 'NewComment' argument 1 names different: declaration 'comment' definition 'str'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1755:44: style:inconclusive: Function 'NewText' argument 1 names different: declaration 'text' definition 'str'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1676:35: note: Function 'NewText' argument 1 names different: declaration 'text' definition 'str'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1755:44: note: Function 'NewText' argument 1 names different: declaration 'text' definition 'str'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1765:58: style:inconclusive: Function 'NewDeclaration' argument 1 names different: declaration 'text' definition 'str'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1688:49: note: Function 'NewDeclaration' argument 1 names different: declaration 'text' definition 'str'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1765:58: note: Function 'NewDeclaration' argument 1 names different: declaration 'text' definition 'str'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1775:50: style:inconclusive: Function 'NewUnknown' argument 1 names different: declaration 'text' definition 'str'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1694:41: note: Function 'NewUnknown' argument 1 names different: declaration 'text' definition 'str'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1775:50: note: Function 'NewUnknown' argument 1 names different: declaration 'text' definition 'str'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1891:42: style:inconclusive: Function 'Parse' argument 1 names different: declaration 'xml' definition 'p'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1575:33: note: Function 'Parse' argument 1 names different: declaration 'xml' definition 'p'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1891:42: note: Function 'Parse' argument 1 names different: declaration 'xml' definition 'p'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1891:52: style:inconclusive: Function 'Parse' argument 2 names different: declaration 'nBytes' definition 'len'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:1575:45: note: Function 'Parse' argument 2 names different: declaration 'nBytes' definition 'len'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:1891:52: note: Function 'Parse' argument 2 names different: declaration 'nBytes' definition 'len'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:2054:51: style:inconclusive: Function 'PrintString' argument 2 names different: declaration 'restrictedEntitySet' definition 'restricted'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2104:41: note: Function 'PrintString' argument 2 names different: declaration 'restrictedEntitySet' definition 'restricted'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:2054:51: note: Function 'PrintString' argument 2 names different: declaration 'restrictedEntitySet' definition 'restricted'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:2092:50: style:inconclusive: Function 'PushHeader' argument 2 names different: declaration 'writeDeclaration' definition 'writeDec'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2020:42: note: Function 'PushHeader' argument 2 names different: declaration 'writeDeclaration' definition 'writeDec'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:2092:50: note: Function 'PushHeader' argument 2 names different: declaration 'writeDeclaration' definition 'writeDec'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:2132:55: style:inconclusive: Function 'PushAttribute' argument 2 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2027:47: note: Function 'PushAttribute' argument 2 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:2132:55: note: Function 'PushAttribute' argument 2 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:2140:60: style:inconclusive: Function 'PushAttribute' argument 2 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2028:52: note: Function 'PushAttribute' argument 2 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:2140:60: note: Function 'PushAttribute' argument 2 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:2148:56: style:inconclusive: Function 'PushAttribute' argument 2 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2029:48: note: Function 'PushAttribute' argument 2 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:2148:56: note: Function 'PushAttribute' argument 2 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:2156:58: style:inconclusive: Function 'PushAttribute' argument 2 names different: declaration 'value' definition 'v'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tinyxml2/tinyxml2.h:2030:50: note: Function 'PushAttribute' argument 2 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tinyxml2/tinyxml2.cpp:2156:58: note: Function 'PushAttribute' argument 2 names different: declaration 'value' definition 'v'.
gromacs-2021.3/src/external/tng_io/external/zlib/deflate.c:155:32: style: struct member 'static_tree_desc_s::dummy' is never used. [unusedStructMember]
gromacs-2021.3/src/external/tng_io/external/zlib/deflate.c:1842:9: style: Variable 'bflush' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/tng_io/external/zlib/inftrees.c:34:21: style: Parameter 'lens' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/external/zlib/inflate.c:1501:17: style: Variable 'state->sane' is reassigned a value before the old one has been used. [redundantAssignment]
gromacs-2021.3/src/external/tng_io/external/zlib/inflate.c:1497:17: note: state->sane is assigned
gromacs-2021.3/src/external/tng_io/external/zlib/inflate.c:1501:17: note: state->sane is overwritten
gromacs-2021.3/src/external/tng_io/external/zlib/trees.c:1155:14: style:inconclusive: Function 'bi_reverse' argument 1 names different: declaration 'value' definition 'code'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tng_io/external/zlib/trees.c:152:27: note: Function 'bi_reverse' argument 1 names different: declaration 'value' definition 'code'.
gromacs-2021.3/src/external/tng_io/external/zlib/trees.c:1155:14: note: Function 'bi_reverse' argument 1 names different: declaration 'value' definition 'code'.
gromacs-2021.3/src/external/tng_io/external/zlib/trees.c:1156:9: style:inconclusive: Function 'bi_reverse' argument 2 names different: declaration 'length' definition 'len'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tng_io/external/zlib/trees.c:152:27: note: Function 'bi_reverse' argument 2 names different: declaration 'length' definition 'len'.
gromacs-2021.3/src/external/tng_io/external/zlib/trees.c:1156:9: note: Function 'bi_reverse' argument 2 names different: declaration 'length' definition 'len'.
gromacs-2021.3/src/external/tng_io/external/zlib/trees.c:578:11: style: Parameter 'bl_count' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/external/zlib/zutil.c:308:31: style: Same expression on both sides of '-'. [duplicateExpression]
gromacs-2021.3/src/external/tng_io/external/zlib/zutil.c:304:12: style: Parameter 'opaque' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/external/zlib/zutil.c:314:12: style: Parameter 'opaque' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/external/zlib/zutil.c:11:33: style: struct member 'internal_state::dummy' is never used. [unusedStructMember]
gromacs-2021.3/src/external/tng_io/src/compression/bwt.c:308:40: style: Parameter 'input' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/bwt.c:25:72: style: Parameter 'vals' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/bwt.c:25:92: style: Parameter 'nrepeat' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:166:11: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:162:11: note: First condition
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:166:11: note: Second condition
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:317:19: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:202:15: note: Shadowed declaration
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:317:19: note: Shadow variable
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:357:27: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:202:15: note: Shadowed declaration
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:357:27: note: Shadow variable
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:381:27: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:202:15: note: Shadowed declaration
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:381:27: note: Shadow variable
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:424:23: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:202:15: note: Shadowed declaration
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:424:23: note: Shadow variable
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:665:27: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:605:15: note: Shadowed declaration
gromacs-2021.3/src/external/tng_io/src/compression/bwlzh.c:665:27: note: Shadow variable
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:40:57: style:inconclusive: Function 'Ptngc_coder_deinit' argument 1 names different: declaration 'coder' definition 'coder_inst'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tng_io/include/compression/coder.h:31:57: note: Function 'Ptngc_coder_deinit' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:40:57: note: Function 'Ptngc_coder_deinit' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:45:64: style:inconclusive: Function 'Ptngc_out8bits' argument 1 names different: declaration 'coder' definition 'coder_inst'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tng_io/include/compression/coder.h:39:53: note: Function 'Ptngc_out8bits' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:45:64: note: Function 'Ptngc_out8bits' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:60:58: style:inconclusive: Function 'Ptngc_write_pattern' argument 1 names different: declaration 'coder' definition 'coder_inst'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tng_io/include/compression/coder.h:41:58: note: Function 'Ptngc_write_pattern' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:60:58: note: Function 'Ptngc_write_pattern' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:80:65: style:inconclusive: Function 'Ptngc_writebits' argument 1 names different: declaration 'coder' definition 'coder_inst'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tng_io/include/compression/coder.h:43:54: note: Function 'Ptngc_writebits' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:80:65: note: Function 'Ptngc_writebits' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:92:56: style:inconclusive: Function 'Ptngc_write32bits' argument 1 names different: declaration 'coder' definition 'coder_inst'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tng_io/include/compression/coder.h:44:56: note: Function 'Ptngc_write32bits' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:92:56: note: Function 'Ptngc_write32bits' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:115:58: style:inconclusive: Function 'Ptngc_writemanybits' argument 1 names different: declaration 'coder' definition 'coder_inst'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tng_io/include/compression/coder.h:45:58: note: Function 'Ptngc_writemanybits' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:115:58: note: Function 'Ptngc_writemanybits' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:214:55: style:inconclusive: Function 'Ptngc_pack_flush' argument 1 names different: declaration 'coder' definition 'coder_inst'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tng_io/include/compression/coder.h:40:55: note: Function 'Ptngc_pack_flush' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:214:55: note: Function 'Ptngc_pack_flush' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:221:65: style:inconclusive: Function 'Ptngc_pack_array' argument 1 names different: declaration 'coder' definition 'coder_inst'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tng_io/include/compression/coder.h:32:65: note: Function 'Ptngc_pack_array' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:221:65: note: Function 'Ptngc_pack_array' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:492:56: style:inconclusive: Function 'Ptngc_unpack_array' argument 1 names different: declaration 'coder' definition 'coder_inst'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/tng_io/include/compression/coder.h:33:56: note: Function 'Ptngc_unpack_array' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/coder.c:492:56: note: Function 'Ptngc_unpack_array' argument 1 names different: declaration 'coder' definition 'coder_inst'.
gromacs-2021.3/src/external/tng_io/src/compression/dict.c:24:46: style: Parameter 'vals' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/huffman.c:219:47: style: Parameter 'vals' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/huffman.c:220:41: style: Parameter 'dict' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/huffman.c:470:43: style: Parameter 'huffman_dict_unpacked' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/lz77.c:309:41: style: Parameter 'data' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/lz77.c:311:35: style: Parameter 'offsets' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/rle.c:39:43: style: Parameter 'vals' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/rle.c:71:45: style: Parameter 'rle' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/mtf.c:176:43: style: Parameter 'vals' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/mtf.c:177:37: style: Parameter 'dict' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/mtf.c:218:45: style: Parameter 'valsmtf' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/mtf.c:219:39: style: Parameter 'dict' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/mtf.c:62:51: style: Parameter 'vals' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/mtf.c:138:53: style: Parameter 'valsmtf' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/mtf.c:81:52: style: Parameter 'vals' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/vals16.c:16:46: style: Parameter 'vals' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/vals16.c:48:48: style: Parameter 'vals16' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:1856:60: style: Parameter 'algo' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:1866:52: style: Parameter 'algo' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:1876:60: style: Parameter 'algo' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:1886:52: style: Parameter 'algo' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:31:38: style: Parameter 'x' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:51:43: style: Parameter 'x' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:95:42: style: Parameter 'quant' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:110:42: style: Parameter 'quant' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:150:47: style: Parameter 'quant' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:168:53: style: Parameter 'quant' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:185:51: style: Parameter 'quant' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:226:47: style: Parameter 'quant' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:247:53: style: Parameter 'quant' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:264:51: style: Parameter 'quant' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/tng_compress.c:294:43: style: Parameter 'buf' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/xtc2.c:355:28: style: Parameter 'in' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/xtc2.c:362:33: style: Parameter 'input' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/xtc2.c:362:45: style: Parameter 'minint' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/xtc2.c:594:31: style: Parameter 'input_ptr' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/xtc2.c:594:88: style: Parameter 'minint' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/xtc2.c:685:89: style: Parameter 'new_large_ints' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/xtc3.c:462:44: style: Parameter 'ints' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/xtc3.c:473:66: style: Parameter 'input' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/xtc3.c:798:42: style: Parameter 'ints' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/compression/xtc3.c:1702:35: style: Parameter 'minint' can be declared with const [constParameter]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:1993:3: warning: Member variable 'Pass < P_SINGLE >::fft_preCallback' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:1993:3: warning: Member variable 'Pass < P_SINGLE >::fft_postCallback' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:1993:3: warning: Member variable 'Pass < P_DOUBLE >::fft_preCallback' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:1993:3: warning: Member variable 'Pass < P_DOUBLE >::fft_postCallback' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:664:8: style: Unused private function: 'Pass < P_SINGLE >::RegIndex' [unusedPrivateFunction]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:664:8: style: Unused private function: 'Pass < P_DOUBLE >::RegIndex' [unusedPrivateFunction]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2820:8: style:inconclusive: Member variable 'Kernel < P_SINGLE >::r2c2r' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2958:23: note: Member variable 'Kernel < P_SINGLE >::r2c2r' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2820:8: note: Member variable 'Kernel < P_SINGLE >::r2c2r' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2820:8: style:inconclusive: Member variable 'Kernel < P_DOUBLE >::r2c2r' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2958:23: note: Member variable 'Kernel < P_DOUBLE >::r2c2r' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2820:8: note: Member variable 'Kernel < P_DOUBLE >::r2c2r' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:611:10: style:inconclusive: Member variable 'Pass < P_SINGLE >::algL' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:1997:4: note: Member variable 'Pass < P_SINGLE >::algL' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:611:10: note: Member variable 'Pass < P_SINGLE >::algL' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:627:8: style:inconclusive: Member variable 'Pass < P_SINGLE >::r2c' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:1998:4: note: Member variable 'Pass < P_SINGLE >::r2c' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:627:8: note: Member variable 'Pass < P_SINGLE >::r2c' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:625:10: style:inconclusive: Member variable 'Pass < P_SINGLE >::numB1' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2000:4: note: Member variable 'Pass < P_SINGLE >::numB1' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:625:10: note: Member variable 'Pass < P_SINGLE >::numB1' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:611:10: style:inconclusive: Member variable 'Pass < P_DOUBLE >::algL' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:1997:4: note: Member variable 'Pass < P_DOUBLE >::algL' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:611:10: note: Member variable 'Pass < P_DOUBLE >::algL' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:627:8: style:inconclusive: Member variable 'Pass < P_DOUBLE >::r2c' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:1998:4: note: Member variable 'Pass < P_DOUBLE >::r2c' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:627:8: note: Member variable 'Pass < P_DOUBLE >::r2c' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:625:10: style:inconclusive: Member variable 'Pass < P_DOUBLE >::numB1' is in the wrong place in the initializer list. [initializerList]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2000:4: note: Member variable 'Pass < P_DOUBLE >::numB1' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:625:10: note: Member variable 'Pass < P_DOUBLE >::numB1' is in the wrong place in the initializer list.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2834:22: style:inconclusive: Technically the member function 'Kernel < P_SINGLE >::IterRegs' can be const. [functionConst]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2853:15: style:inconclusive: Technically the member function 'Kernel < P_SINGLE >::IsGroupedReadWritePossible' can be const. [functionConst]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2834:22: style:inconclusive: Technically the member function 'Kernel < P_DOUBLE >::IterRegs' can be const. [functionConst]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2853:15: style:inconclusive: Technically the member function 'Kernel < P_DOUBLE >::IsGroupedReadWritePossible' can be const. [functionConst]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:646:15: performance:inconclusive: Technically the member function 'Pass < P_SINGLE >::RegBase' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:652:15: performance:inconclusive: Technically the member function 'Pass < P_SINGLE >::RegBaseAndCount' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:658:15: performance:inconclusive: Technically the member function 'Pass < P_SINGLE >::RegBaseAndCountAndPos' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:646:15: performance:inconclusive: Technically the member function 'Pass < P_DOUBLE >::RegBase' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:652:15: performance:inconclusive: Technically the member function 'Pass < P_DOUBLE >::RegBaseAndCount' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:658:15: performance:inconclusive: Technically the member function 'Pass < P_DOUBLE >::RegBaseAndCountAndPos' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:534:4: warning: Class 'TwiddleTable' does not have a copy constructor which is recommended since it has dynamic memory/resource allocation(s). [noCopyConstructor]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:534:4: warning: Class 'TwiddleTable' does not have a operator= which is recommended since it has dynamic memory/resource allocation(s). [noOperatorEq]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:530:3: style: Class 'TwiddleTable' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2957:9: style: Class 'Kernel < P_SINGLE >' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2957:9: style: Class 'Kernel < P_DOUBLE >' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2497:20: style: Redundant condition: halfLds. '!halfLds || (halfLds && position==0)' is equivalent to '!halfLds || position==0' [redundantCondition]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4040:10: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4039:10: note: First condition
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4040:10: note: Second condition
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4424:10: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4423:10: note: First condition
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4424:10: note: Second condition
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2083:7: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2082:7: note: First condition
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2083:7: note: Second condition
gromacs-2021.3/src/external/tng_io/src/tests/compression/testsuite.c:80:27: style: Parameter 'base' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/tests/compression/testsuite.c:213:26: style: Parameter 'intbox' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/tests/compression/testsuite.c:225:29: style: Parameter 'intbox' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/tests/compression/testsuite.c:237:27: style: Parameter 'arr1' can be declared with const [constParameter]
gromacs-2021.3/src/external/tng_io/src/tests/compression/testsuite.c:237:39: style: Parameter 'arr2' can be declared with const [constParameter]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:459:43: style: Redundant initialization for 'maxWorkGroupSize'. The initialized value is overwritten before it is read. [redundantInitialization]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:454:28: note: maxWorkGroupSize is initialized
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:459:43: note: maxWorkGroupSize is overwritten
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:3016:11: style: The scope of the variable 'pid' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:858:9: style: The scope of the variable 'swapElement' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4630:77: style:inconclusive: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/action.h:174:56: note: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4630:77: note: Function 'getWorkSizes' argument 1 names different: declaration 'globalws' definition 'globalWS'.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4630:109: style:inconclusive: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'. [funcArgNamesDifferent]
gromacs-2021.3/src/external/clFFT/src/library/action.h:174:88: note: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4630:109: note: Function 'getWorkSizes' argument 2 names different: declaration 'localws' definition 'localWS'.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4258:58: style: Local variable 'p' shadows outer variable [shadowVariable]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:3385:53: note: Shadowed declaration
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4258:58: note: Shadow variable
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2045:63: performance: Function parameter 'precallbackParam' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:2051:65: performance: Function parameter 'postcallbackParam' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/external/tng_io/src/tests/tng_io_testing.c:840:10: style: Variable 'stat' is reassigned a value before the old one has been used. [redundantAssignment]
gromacs-2021.3/src/external/tng_io/src/tests/tng_io_testing.c:774:10: note: stat is assigned
gromacs-2021.3/src/external/tng_io/src/tests/tng_io_testing.c:840:10: note: stat is overwritten
gromacs-2021.3/src/external/tng_io/src/tests/tng_io_testing.c:1322:10: style: Variable 'stat' is reassigned a value before the old one has been used. [redundantAssignment]
gromacs-2021.3/src/external/tng_io/src/tests/tng_io_testing.c:1318:10: note: stat is assigned
gromacs-2021.3/src/external/tng_io/src/tests/tng_io_testing.c:1322:10: note: stat is overwritten
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:179:8: style: struct member 'ParamRead::halfLds' is never used. [unusedStructMember]
gromacs-2021.3/src/gromacs/analysisdata/datamodulemanager.cpp:137:10: style:inconclusive: Technically the member function 'gmx::Impl::presentData' can be const. [functionConst]
gromacs-2021.3/src/gromacs/analysisdata/datamodulemanager.cpp:219:39: note: Technically the member function 'gmx::Impl::presentData' can be const.
gromacs-2021.3/src/gromacs/analysisdata/datamodulemanager.cpp:137:10: note: Technically the member function 'gmx::Impl::presentData' can be const.
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:1555:23: style: Variable 'rType' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:553:25: performance: Prefer prefix ++/-- operators for non-primitive types. [postfixOperator]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:563:25: performance: Prefer prefix ++/-- operators for non-primitive types. [postfixOperator]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:3280:85: performance: Prefer prefix ++/-- operators for non-primitive types. [postfixOperator]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:3388:86: performance: Prefer prefix ++/-- operators for non-primitive types. [postfixOperator]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:3392:34: performance: Prefer prefix ++/-- operators for non-primitive types. [postfixOperator]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:3421:48: performance: Prefer prefix ++/-- operators for non-primitive types. [postfixOperator]
gromacs-2021.3/src/external/clFFT/src/library/generator.stockham.cpp:4258:97: performance: Prefer prefix ++/-- operators for non-primitive types. [postfixOperator]
gromacs-2021.3/src/gromacs/analysisdata/datastorage.cpp:856:45: style: Variable 'storedFrame' can be declared with const [constVariable]
gromacs-2021.3/src/gromacs/analysisdata/tests/analysisdata.cpp:115:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/analysisdata/modules/histogram.h:235:5: style: Class 'AnalysisHistogramSettings' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/analysisdata/tests/arraydata.cpp:96:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/analysisdata/tests/average.cpp:172:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/analysisdata/tests/histogram.cpp:83:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/analysisdata/tests/lifetime.cpp:134:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:301:5: style: Class 'StaticDataFrameHeaderChecker' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/applied_forces/awh/biaswriter.h:116:26: style:inconclusive: Technically the member function 'gmx::AwhEnergyBlock::data' can be const. [functionConst]
gromacs-2021.3/src/gromacs/applied_forces/awh/biaswriter.h:133:5: style: Class 'BiasWriter' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.cpp:182:32: style:inconclusive: Function 'Awh' argument 8 names different: declaration 'numLambdaStates' definition 'numFepLambdaStates'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.h:142:31: note: Function 'Awh' argument 8 names different: declaration 'numLambdaStates' definition 'numFepLambdaStates'.
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.cpp:182:32: note: Function 'Awh' argument 8 names different: declaration 'numLambdaStates' definition 'numFepLambdaStates'.
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.cpp:183:32: style:inconclusive: Function 'Awh' argument 9 names different: declaration 'lambdaState' definition 'fepLambdaState'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.h:143:31: note: Function 'Awh' argument 9 names different: declaration 'lambdaState' definition 'fepLambdaState'.
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.cpp:183:32: note: Function 'Awh' argument 9 names different: declaration 'lambdaState' definition 'fepLambdaState'.
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.cpp:490:56: style:inconclusive: Function 'writeToEnergyFrame' argument 2 names different: declaration 'fr' definition 'frame'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.h:238:55: note: Function 'writeToEnergyFrame' argument 2 names different: declaration 'fr' definition 'frame'.
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.cpp:490:56: note: Function 'writeToEnergyFrame' argument 2 names different: declaration 'fr' definition 'frame'.
gromacs-2021.3/src/gromacs/applied_forces/awh/dimparams.h:125:22: style: Local variable 'fepDimParams' shadows outer function [shadowFunction]
gromacs-2021.3/src/gromacs/applied_forces/awh/dimparams.h:140:25: note: Shadowed declaration
gromacs-2021.3/src/gromacs/applied_forces/awh/dimparams.h:125:22: note: Shadow variable
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.cpp:153:64: performance:inconclusive: Function parameter 'biasCoupledToSystem' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.cpp:158:9: style: Consider using std::any_of algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.cpp:280:23: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/applied_forces/awh/awh.cpp:553:9: style: Consider using std::any_of algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/applied_forces/awh/bias.cpp:332:43: style:inconclusive: Function 'Bias' argument 4 names different: declaration 'dimParams' definition 'dimParamsInit'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/bias.h:169:41: note: Function 'Bias' argument 4 names different: declaration 'dimParams' definition 'dimParamsInit'.
gromacs-2021.3/src/gromacs/applied_forces/awh/bias.cpp:332:43: note: Function 'Bias' argument 4 names different: declaration 'dimParams' definition 'dimParamsInit'.
gromacs-2021.3/src/gromacs/applied_forces/awh/bias.cpp:232:20: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasparams.cpp:185:25: style: Unused variable: x [unusedVariable]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasgrid.cpp:827:41: style: The comparison 'c_numPointsPerSigma >= 1.0' is always true. [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasgrid.h:189:52: note: 'c_numPointsPerSigma' is assigned value '1.0' here.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasgrid.cpp:827:41: note: The comparison 'c_numPointsPerSigma >= 1.0' is always true.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasgrid.cpp:261:54: style:inconclusive: Function 'linearArrayIndexToMultiDim' argument 2 names different: declaration 'ndim' definition 'numDimensions'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasgrid.h:309:54: note: Function 'linearArrayIndexToMultiDim' argument 2 names different: declaration 'ndim' definition 'numDimensions'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasgrid.cpp:261:54: note: Function 'linearArrayIndexToMultiDim' argument 2 names different: declaration 'ndim' definition 'numDimensions'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasgrid.cpp:290:63: style:inconclusive: Function 'multiDimArrayIndexToLinear' argument 2 names different: declaration 'numDim' definition 'numDimensions'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasgrid.h:292:63: note: Function 'multiDimArrayIndexToLinear' argument 2 names different: declaration 'numDim' definition 'numDimensions'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasgrid.cpp:290:63: note: Function 'multiDimArrayIndexToLinear' argument 2 names different: declaration 'numDim' definition 'numDimensions'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasgrid.cpp:486:44: style:inconclusive: Function 'advancePointInSubgrid' argument 3 names different: declaration 'subgridNpoints' definition 'subgridNumPoints'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasgrid.h:332:44: note: Function 'advancePointInSubgrid' argument 3 names different: declaration 'subgridNpoints' definition 'subgridNumPoints'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasgrid.cpp:486:44: note: Function 'advancePointInSubgrid' argument 3 names different: declaration 'subgridNpoints' definition 'subgridNumPoints'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biaswriter.cpp:387:73: style:inconclusive: Function 'writeToEnergySubblocks' argument 2 names different: declaration 'subblock' definition 'sub'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/biaswriter.h:147:65: note: Function 'writeToEnergySubblocks' argument 2 names different: declaration 'subblock' definition 'sub'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biaswriter.cpp:387:73: note: Function 'writeToEnergySubblocks' argument 2 names different: declaration 'subblock' definition 'sub'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biaswriter.cpp:209:23: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/applied_forces/awh/biaswriter.cpp:234:21: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/applied_forces/awh/biaswriter.cpp:242:23: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:1438:23: style: The scope of the variable 'bias' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:619:73: style:inconclusive: Function 'getSkippedUpdateHistogramScaleFactors' argument 2 names different: declaration 'weighthistScaling' definition 'weightHistScaling'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.h:300:66: note: Function 'getSkippedUpdateHistogramScaleFactors' argument 2 names different: declaration 'weighthistScaling' definition 'weightHistScaling'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:619:73: note: Function 'getSkippedUpdateHistogramScaleFactors' argument 2 names different: declaration 'weighthistScaling' definition 'weightHistScaling'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:620:73: style:inconclusive: Function 'getSkippedUpdateHistogramScaleFactors' argument 3 names different: declaration 'logPmfsumScaling' definition 'logPmfSumScaling'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.h:301:66: note: Function 'getSkippedUpdateHistogramScaleFactors' argument 3 names different: declaration 'logPmfsumScaling' definition 'logPmfSumScaling'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:620:73: note: Function 'getSkippedUpdateHistogramScaleFactors' argument 3 names different: declaration 'logPmfsumScaling' definition 'logPmfSumScaling'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:1099:88: style:inconclusive: Function 'updateFreeEnergyAndAddSamplesToHistogram' argument 5 names different: declaration 'ms' definition 'multiSimComm'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.h:420:81: note: Function 'updateFreeEnergyAndAddSamplesToHistogram' argument 5 names different: declaration 'ms' definition 'multiSimComm'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:1099:88: note: Function 'updateFreeEnergyAndAddSamplesToHistogram' argument 5 names different: declaration 'ms' definition 'multiSimComm'.
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:926:13: style: Local variable 'notVisitedHigh' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:874:10: note: Shadowed declaration
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:926:13: note: Shadow variable
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:927:13: style: Local variable 'notVisitedLow' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:873:10: note: Shadowed declaration
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:927:13: note: Shadow variable
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:511:66: performance:inconclusive: Function parameter 'neighborLambdaDhdl' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:512:66: performance:inconclusive: Function parameter 'forceWorkBuffer' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:542:62: performance:inconclusive: Function parameter 'neighborLambdaDhdl' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:1406:65: performance:inconclusive: Function parameter 'probWeightNeighbor' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:198:18: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:1139:9: style: Consider using std::any_of algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:1318:11: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/applied_forces/awh/biasstate.cpp:874:30: style: Variable 'notVisitedHigh' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/applied_forces/awh/coordstate.cpp:131:70: performance:inconclusive: Function parameter 'probWeightNeighbor' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/applied_forces/awh/correlationgrid.cpp:84:53: style:inconclusive: Function 'CorrelationGrid' argument 2 names different: declaration 'numDims' definition 'numDim'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/correlationgrid.h:91:40: note: Function 'CorrelationGrid' argument 2 names different: declaration 'numDims' definition 'numDim'.
gromacs-2021.3/src/gromacs/applied_forces/awh/correlationgrid.cpp:84:53: note: Function 'CorrelationGrid' argument 2 names different: declaration 'numDims' definition 'numDim'.
gromacs-2021.3/src/gromacs/applied_forces/awh/correlationhistory.cpp:76:83: style:inconclusive: Function 'initCorrelationGridHistoryFromState' argument 1 names different: declaration 'corrGrid' definition 'correlationGrid'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/correlationhistory.h:67:83: note: Function 'initCorrelationGridHistoryFromState' argument 1 names different: declaration 'corrGrid' definition 'correlationGrid'.
gromacs-2021.3/src/gromacs/applied_forces/awh/correlationhistory.cpp:76:83: note: Function 'initCorrelationGridHistoryFromState' argument 1 names different: declaration 'corrGrid' definition 'correlationGrid'.
gromacs-2021.3/src/gromacs/applied_forces/awh/correlationhistory.cpp:87:59: style:inconclusive: Function 'updateCorrelationGridHistory' argument 1 names different: declaration 'corrGridHist' definition 'correlationGridHistory'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/correlationhistory.h:84:59: note: Function 'updateCorrelationGridHistory' argument 1 names different: declaration 'corrGridHist' definition 'correlationGridHistory'.
gromacs-2021.3/src/gromacs/applied_forces/awh/correlationhistory.cpp:87:59: note: Function 'updateCorrelationGridHistory' argument 1 names different: declaration 'corrGridHist' definition 'correlationGridHistory'.
gromacs-2021.3/src/gromacs/applied_forces/awh/correlationhistory.cpp:88:59: style:inconclusive: Function 'updateCorrelationGridHistory' argument 2 names different: declaration 'corrGrid' definition 'correlationGrid'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/correlationhistory.h:84:96: note: Function 'updateCorrelationGridHistory' argument 2 names different: declaration 'corrGrid' definition 'correlationGrid'.
gromacs-2021.3/src/gromacs/applied_forces/awh/correlationhistory.cpp:88:59: note: Function 'updateCorrelationGridHistory' argument 2 names different: declaration 'corrGrid' definition 'correlationGrid'.
gromacs-2021.3/src/gromacs/applied_forces/awh/histogramsize.cpp:214:71: performance:inconclusive: Function parameter 'weightsumCovering' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/applied_forces/awh/tests/bias.cpp:205:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/applied_forces/awh/tests/bias_fep_lambda_state.cpp:189:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/applied_forces/awh/tests/biasstate.cpp:158:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:188:13: style:inconclusive: Technically the member function 'gmx::::DensityFittingSimulationParameterSetup::periodicBoundaryConditionType' can be const. [functionConst]
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:202:12: style:inconclusive: Technically the member function 'gmx::::DensityFittingSimulationParameterSetup::simulationTimeStep' can be const. [functionConst]
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:114:17: warning: Either the condition 'localAtomSet_==nullptr' is redundant or there is possible null pointer dereference: localAtomSet_. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:108:27: note: Assuming that condition 'localAtomSet_==nullptr' is not redundant
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:114:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:128:17: warning: Either the condition 'transformationToDensityLattice_==nullptr' is redundant or there is possible null pointer dereference: transformationToDensityLattice_. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:123:45: note: Assuming that condition 'transformationToDensityLattice_==nullptr' is not redundant
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:128:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:140:16: warning: Either the condition 'referenceDensity_==nullptr' is redundant or there is possible null pointer dereference: referenceDensity_. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:136:31: note: Assuming that condition 'referenceDensity_==nullptr' is not redundant
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:140:16: note: Null pointer dereference
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:195:17: warning: Either the condition 'pbcType_==nullptr' is redundant or there is possible null pointer dereference: pbcType_. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:190:22: note: Assuming that condition 'pbcType_==nullptr' is not redundant
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:195:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:171:35: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:160:45: style:inconclusive: Technically the member function 'gmx::Impl::stateToCheckpoint' can be const. [functionConst]
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:385:76: note: Technically the member function 'gmx::Impl::stateToCheckpoint' can be const.
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:160:45: note: Technically the member function 'gmx::Impl::stateToCheckpoint' can be const.
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:309:23: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/applied_forces/awh/read_params.cpp:643:9: style: Variable 'opt' is reassigned a value before the old one has been used. [redundantAssignment]
gromacs-2021.3/src/gromacs/applied_forces/awh/read_params.cpp:637:9: note: opt is assigned
gromacs-2021.3/src/gromacs/applied_forces/awh/read_params.cpp:643:9: note: opt is overwritten
gromacs-2021.3/src/gromacs/applied_forces/awh/read_params.cpp:803:67: style:inconclusive: Function 'checkAwhParams' argument 2 names different: declaration 'inputrec' definition 'ir'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/awh/read_params.h:78:67: note: Function 'checkAwhParams' argument 2 names different: declaration 'inputrec' definition 'ir'.
gromacs-2021.3/src/gromacs/applied_forces/awh/read_params.cpp:803:67: note: Function 'checkAwhParams' argument 2 names different: declaration 'inputrec' definition 'ir'.
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/tests/densityfitting.cpp:124:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingamplitudelookup.cpp:74:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingoptions.cpp:133:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/applied_forces/tests/electricfield.cpp:133:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/applied_forces/electricfield.cpp:227:67: style:inconclusive: Function 'initMdpTransform' argument 1 names different: declaration 'transform' definition 'rules'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/applied_forces/electricfield.cpp:168:56: note: Function 'initMdpTransform' argument 1 names different: declaration 'transform' definition 'rules'.
gromacs-2021.3/src/gromacs/applied_forces/electricfield.cpp:227:67: note: Function 'initMdpTransform' argument 1 names different: declaration 'transform' definition 'rules'.
gromacs-2021.3/src/gromacs/commandline/cmdlinehelpwriter.cpp:478:10: style:inconclusive: Technically the member function 'gmx::Impl::formatBugs' can be const. [functionConst]
gromacs-2021.3/src/gromacs/commandline/cmdlinehelpwriter.cpp:488:35: note: Technically the member function 'gmx::Impl::formatBugs' can be const.
gromacs-2021.3/src/gromacs/commandline/cmdlinehelpwriter.cpp:478:10: note: Technically the member function 'gmx::Impl::formatBugs' can be const.
gromacs-2021.3/src/gromacs/commandline/cmdlinehelpwriter.cpp:523:90: style:inconclusive: Function 'setKnownIssues' argument 1 names different: declaration 'bug' definition 'bugs'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/commandline/cmdlinehelpwriter.h:109:71: note: Function 'setKnownIssues' argument 1 names different: declaration 'bug' definition 'bugs'.
gromacs-2021.3/src/gromacs/commandline/cmdlinehelpwriter.cpp:523:90: note: Function 'setKnownIssues' argument 1 names different: declaration 'bug' definition 'bugs'.
gromacs-2021.3/src/gromacs/commandline/cmdlinemodulemanager.cpp:389:22: warning: Either the condition 'moduleIter==modules_.end()' is redundant or there is possible dereference of an invalid iterator: moduleIter. [derefInvalidIteratorRedundantCheck]
gromacs-2021.3/src/gromacs/commandline/cmdlinemodulemanager.cpp:384:28: note: Assuming that condition 'moduleIter==modules_.end()' is not redundant
gromacs-2021.3/src/gromacs/commandline/cmdlinemodulemanager.cpp:389:22: note: Dereference of an invalid iterator
gromacs-2021.3/src/gromacs/commandline/filenm.cpp:252:62: performance: Function parameter 'filename' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/commandline/filenm.cpp:267:51: performance: Function parameter 'filename' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:83:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp:102:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:80:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:162:12: error: Reference to local variable returned. [returnReference]
gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:159:62: note: Raw pointer to smart pointer created here.
gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:162:12: note: Reference to local variable returned.
gromacs-2021.3/src/gromacs/commandline/tests/cmdlineparser.cpp:98:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:162:12: warning: Access of moved variable '*'. [accessMoved]
gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:161:58: note: Calling std::move(modulePtr)
gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:162:12: note: Access of moved variable '*'.
gromacs-2021.3/src/gromacs/commandline/tests/cmdlineprogramcontext.cpp:117:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/commandline/tests/filenm.cpp:68:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/commandline/tests/pargs.cpp:129:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/commandline/viewit.cpp:73:17: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/commandline/viewit.cpp:73:30: style: The scope of the variable 'env' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/commandline/viewit.cpp:74:17: style: The scope of the variable 'cmd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/commandline/viewit.cpp:75:17: style: The scope of the variable 'ftp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/commandline/viewit.cpp:75:22: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/compat/tests/mp11.cpp:75:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/compat/tests/pointers.cpp:90:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/coordinateio/outputadaptercontainer.h:108:42: style:inconclusive: Technically the member function 'gmx::OutputAdapterContainer::getAdapters' can be const. [functionConst]
gromacs-2021.3/src/gromacs/coordinateio/outputadapters/setatoms.h:99:5: warning:inconclusive: Member variable 'SetAtoms::moduleRequirements_' is not assigned in the copy constructor. Should it be copied? [uninitMemberVar]
gromacs-2021.3/src/gromacs/coordinateio/outputadapters/setstarttime.cpp:67:40: style:inconclusive: Function 'setInitialTime' argument 1 names different: declaration 'initialTime' definition 'initialTimeFromFrame'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/coordinateio/outputadapters/setstarttime.h:98:30: note: Function 'setInitialTime' argument 1 names different: declaration 'initialTime' definition 'initialTimeFromFrame'.
gromacs-2021.3/src/gromacs/coordinateio/outputadapters/setstarttime.cpp:67:40: note: Function 'setInitialTime' argument 1 names different: declaration 'initialTime' definition 'initialTimeFromFrame'.
gromacs-2021.3/src/gromacs/coordinateio/tests/builder.cpp:93:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/coordinateio/tests/outputadaptercontainer.cpp:70:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/coordinateio/tests/outputadapters.cpp:59:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/coordinateio/tests/requirements.cpp:63:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/coordinateio/tests/setatoms.cpp:106:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/coordinateio/tests/setbothtime.cpp:108:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/coordinateio/tests/setstarttime.cpp:91:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/coordinateio/tests/settimestep.cpp:91:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:145:12: style: The scope of the variable 'erfarg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:321:23: style: The scope of the variable 'omega' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:321:30: style: The scope of the variable 'wv' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:321:38: style: The scope of the variable 'ec' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:321:42: style: The scope of the variable 'es' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:322:12: style: The scope of the variable 'wv_max' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:354:20: style: The scope of the variable 'v1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:354:24: style: The scope of the variable 'v2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:356:12: style: The scope of the variable 'fa1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:592:13: style: The scope of the variable 'fp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:594:23: style: The scope of the variable 'ttt' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:741:22: style: The scope of the variable 'tail_corr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:741:50: style: The scope of the variable 'c_start' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:741:59: style: The scope of the variable 'ct_estimate' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:715:26: style: Local variable 'ttt' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:594:23: note: Shadowed declaration
gromacs-2021.3/src/gromacs/correlationfunctions/expfit.cpp:715:26: note: Shadow variable
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:133:16: style: The scope of the variable 'j3' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:133:28: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:312:11: style: The scope of the variable 'rij' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:548:14: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:545:46: style:inconclusive: Function 'low_do_autocorr' argument 16 names different: declaration 'nfitparm' definition 'eFitFn'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.h:194:46: note: Function 'low_do_autocorr' argument 16 names different: declaration 'nfitparm' definition 'eFitFn'.
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:545:46: note: Function 'low_do_autocorr' argument 16 names different: declaration 'nfitparm' definition 'eFitFn'.
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:210:22: style: Local variable 'xj' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:135:10: note: Shadowed declaration
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:210:22: note: Shadow variable
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:210:26: style: Local variable 'xk' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:135:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:210:26: note: Shadow variable
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:599:14: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:548:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:599:14: note: Shadow variable
gromacs-2021.3/src/gromacs/correlationfunctions/autocorr.cpp:716:46: style: Parameter 'pa' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/correlationfunctions/integrate.cpp:95:26: style: The scope of the variable 'w' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/correlationfunctions/tests/autocorr.cpp:165:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/correlationfunctions/tests/correlationdataset.cpp:77:48: style:inconclusive: Function 'getValue' argument 2 names different: declaration 't' definition 'time'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/correlationfunctions/tests/correlationdataset.h:73:32: note: Function 'getValue' argument 2 names different: declaration 't' definition 'time'.
gromacs-2021.3/src/gromacs/correlationfunctions/tests/correlationdataset.cpp:77:48: note: Function 'getValue' argument 2 names different: declaration 't' definition 'time'.
gromacs-2021.3/src/gromacs/correlationfunctions/tests/manyautocorrelation.cpp:66:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/domdec/atomdistribution.cpp:74:9: style: Local variable 'numRanks' shadows outer function [shadowFunction]
gromacs-2021.3/src/gromacs/domdec/atomdistribution.cpp:52:12: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/atomdistribution.cpp:74:9: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/box.cpp:238:58: performance:inconclusive: Function parameter 'x' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/box.cpp:308:50: performance:inconclusive: Function parameter 'x' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/collect.cpp:251:56: style:inconclusive: Function 'dd_collect_state' argument 2 names different: declaration 'localState' definition 'state_local'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/domdec/collect.h:65:56: note: Function 'dd_collect_state' argument 2 names different: declaration 'localState' definition 'state_local'.
gromacs-2021.3/src/gromacs/domdec/collect.cpp:251:56: note: Function 'dd_collect_state' argument 2 names different: declaration 'localState' definition 'state_local'.
gromacs-2021.3/src/gromacs/domdec/collect.cpp:251:78: style:inconclusive: Function 'dd_collect_state' argument 3 names different: declaration 'globalState' definition 'state'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/domdec/collect.h:65:77: note: Function 'dd_collect_state' argument 3 names different: declaration 'globalState' definition 'state'.
gromacs-2021.3/src/gromacs/domdec/collect.cpp:251:78: note: Function 'dd_collect_state' argument 3 names different: declaration 'globalState' definition 'state'.
gromacs-2021.3/src/gromacs/domdec/collect.cpp:168:18: style: Local variable 'rank' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/collect.cpp:161:13: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/collect.cpp:168:18: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/collect.cpp:189:21: style: Local variable 'localAtom' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/collect.cpp:162:13: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/collect.cpp:189:21: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/collect.cpp:61:52: performance:inconclusive: Function parameter 'localCGNumbers' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/collect.cpp:234:52: performance:inconclusive: Function parameter 'localCGNumbers' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/collect.cpp:235:52: performance:inconclusive: Function parameter 'localVector' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/collect.cpp:236:52: performance:inconclusive: Function parameter 'globalVector' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/distribute.cpp:144:58: performance:inconclusive: Function parameter 'globalVec' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/distribute.cpp:145:58: performance:inconclusive: Function parameter 'localVec' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/cellsizes.cpp:133:12: style: The scope of the variable 'dim' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/cellsizes.cpp:209:85: style:inconclusive: Function 'set_dd_cell_sizes_slb' argument 4 names different: declaration 'numPulses' definition 'npulse'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/domdec/cellsizes.h:78:85: note: Function 'set_dd_cell_sizes_slb' argument 4 names different: declaration 'numPulses' definition 'npulse'.
gromacs-2021.3/src/gromacs/domdec/cellsizes.cpp:209:85: note: Function 'set_dd_cell_sizes_slb' argument 4 names different: declaration 'numPulses' definition 'npulse'.
gromacs-2021.3/src/gromacs/domdec/cellsizes.cpp:444:18: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/cellsizes.cpp:416:15: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/cellsizes.cpp:444:18: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/cellsizes.cpp:484:22: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/cellsizes.cpp:416:15: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/cellsizes.cpp:484:22: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/cellsizes.cpp:492:22: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/cellsizes.cpp:416:15: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/cellsizes.cpp:492:22: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/dlbtiming.h:88:5: style: Class 'DDBalanceRegionHandler' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/domdec/dlbtiming.cpp:143:55: style:inconclusive: Function 'closeRegionGpuImpl' argument 1 names different: declaration 'waitCyclesGpuInCpuRegion' definition 'waitGpuCyclesInCpuRegion'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/domdec/dlbtiming.h:198:35: note: Function 'closeRegionGpuImpl' argument 1 names different: declaration 'waitCyclesGpuInCpuRegion' definition 'waitGpuCyclesInCpuRegion'.
gromacs-2021.3/src/gromacs/domdec/dlbtiming.cpp:143:55: note: Function 'closeRegionGpuImpl' argument 1 names different: declaration 'waitCyclesGpuInCpuRegion' definition 'waitGpuCyclesInCpuRegion'.
gromacs-2021.3/src/gromacs/domdec/domdec_constraints.cpp:416:39: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_constraints.cpp:416:42: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_constraints.cpp:587:31: style: The scope of the variable 'molb' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_setup.cpp:104:27: style: Condition 'fac->empty()' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/domdec/domdec_setup.cpp:570:16: style: The scope of the variable 'ce' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_setup.cpp:902:59: performance:inconclusive: Function parameter 'xGlobal' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/domdec_internal.h:361:22: style: Unused private function: 'DDBuffer < int >::acquire' [unusedPrivateFunction]
gromacs-2021.3/src/gromacs/domdec/domdec_internal.h:370:10: style: Unused private function: 'DDBuffer < int >::release' [unusedPrivateFunction]
gromacs-2021.3/src/gromacs/domdec/domdec_internal.h:361:22: style: Unused private function: 'DDBuffer < gmx :: RVec >::acquire' [unusedPrivateFunction]
gromacs-2021.3/src/gromacs/domdec/domdec_internal.h:370:10: style: Unused private function: 'DDBuffer < gmx :: RVec >::release' [unusedPrivateFunction]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:450:25: style: Condition 'shiftForcesNeedPbc' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1717:13: warning:inconclusive: Possible null pointer dereference: slb_frac [nullPointer]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1701:16: note: Assignment 'slb_frac=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1717:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1719:20: warning:inconclusive: Possible null pointer dereference: slb_frac [nullPointer]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1701:16: note: Assignment 'slb_frac=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1719:20: note: Null pointer dereference
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1725:13: warning:inconclusive: Possible null pointer dereference: slb_frac [nullPointer]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1701:16: note: Assignment 'slb_frac=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1725:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1726:62: warning:inconclusive: Possible null pointer dereference: slb_frac [nullPointer]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1701:16: note: Assignment 'slb_frac=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1726:62: note: Null pointer dereference
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:266:28: style: The scope of the variable 'cd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:483:28: style: The scope of the variable 'cd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1203:33: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1698:12: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:2691:27: style: The scope of the variable 'dim' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:2691:40: style: The scope of the variable 'npulse_d_max' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:2691:54: style: The scope of the variable 'npulse_d' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:3077:20: style: The scope of the variable 'dim' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:3077:25: style: The scope of the variable 'np' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:301:30: style: Local variable 'd' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:274:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:301:30: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:419:30: style: Local variable 'd' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:368:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:419:30: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:430:30: style: Local variable 'd' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:368:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:430:30: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:435:30: style: Local variable 'd' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:368:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:435:30: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:453:34: style: Local variable 'd' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:368:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:453:34: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:850:83: performance:inconclusive: Function parameter 'pmeRanks' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1648:62: performance:inconclusive: Function parameter 'pmeRanks' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:2059:66: performance:inconclusive: Function parameter 'xGlobal' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:2512:54: performance:inconclusive: Function parameter 'cginfo_mb' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:3074:102: performance:inconclusive: Function parameter 'x' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:3140:91: performance:inconclusive: Function parameter 'x' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1980:29: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:2042:13: style: Consider using std::any_of algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/domdec/domdec.cpp:1937:12: error: Uninitialized struct member: comm.dlbState [uninitStructMember]
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:72:34: style: The scope of the variable 'dim' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:184:66: style: The scope of the variable 'dim' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:367:23: style: The scope of the variable 'dim' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:367:38: style: The scope of the variable 'ns' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:368:39: style: The scope of the variable 'nat_tot_prev' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:268:23: style: Local variable 'vbuf' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:201:19: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:268:23: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:273:23: style: Local variable 'vbuf' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:201:19: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:273:23: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:331:23: style: Local variable 'vbuf' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:301:19: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:331:23: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:336:23: style: Local variable 'vbuf' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:301:19: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/domdec_specatomcomm.cpp:336:23: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/dump.cpp:62:12: style: The scope of the variable 'fname' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/dump.cpp:62:27: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/dump.cpp:63:12: style: The scope of the variable 'out' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/dump.cpp:64:12: style: The scope of the variable 'a' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/dump.cpp:64:15: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/dump.cpp:64:18: style: The scope of the variable 'd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/dump.cpp:64:21: style: The scope of the variable 'z' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/dump.cpp:64:24: style: The scope of the variable 'y' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/dump.cpp:64:27: style: The scope of the variable 'x' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/dump.cpp:178:14: style: The scope of the variable 'c' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:122:5: style: Struct 'thread_work_t' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/domdec/localatomsetdata.h:79:51: performance:inconclusive: Function parameter 'globalAtomIndex' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:372:41: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:372:44: style: The scope of the variable 'ndiff' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:372:51: style: The scope of the variable 'rest_global' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:372:64: style: The scope of the variable 'rest_local' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:373:26: style: The scope of the variable 'nral' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:934:13: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:936:13: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:936:16: style: The scope of the variable 'ftype_r' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:936:25: style: The scope of the variable 'nral_r' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:1403:24: style: The scope of the variable 'cg0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:1403:29: style: The scope of the variable 'cg1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:1533:14: style: The scope of the variable 'd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:1958:9: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:1958:12: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:1740:25: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:1720:21: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:1740:25: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:1495:27: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:482:11: error: Uninitialized variable: mid [uninitvar]
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:465:12: note: Assuming condition is false
gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:482:11: note: Uninitialized variable: mid
gromacs-2021.3/src/gromacs/domdec/localatomsetdata.cpp:61:58: style:inconclusive: Function 'LocalAtomSetData' argument 1 names different: declaration 'globalAtomIndex' definition 'globalIndex'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/domdec/localatomsetdata.h:96:53: note: Function 'LocalAtomSetData' argument 1 names different: declaration 'globalAtomIndex' definition 'globalIndex'.
gromacs-2021.3/src/gromacs/domdec/localatomsetdata.cpp:61:58: note: Function 'LocalAtomSetData' argument 1 names different: declaration 'globalAtomIndex' definition 'globalIndex'.
gromacs-2021.3/src/gromacs/domdec/localatomsetmanager.h:101:10: style:inconclusive: Technically the member function 'gmx::LocalAtomSetManager::setIndicesInDomainDecomposition' can be const. [functionConst]
gromacs-2021.3/src/gromacs/domdec/localatomsetmanager.cpp:89:27: note: Technically the member function 'gmx::LocalAtomSetManager::setIndicesInDomainDecomposition' can be const.
gromacs-2021.3/src/gromacs/domdec/localatomsetmanager.h:101:10: note: Technically the member function 'gmx::LocalAtomSetManager::setIndicesInDomainDecomposition' can be const.
gromacs-2021.3/src/gromacs/domdec/redistribute.cpp:433:5: warning: Member variable 'PbcAndFlag::moveFlag' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/domdec/redistribute.cpp:743:9: style:inconclusive: Same expression used in consecutive assignments of 'home_pos_cg' and 'home_pos_at'. [duplicateAssignExpression]
gromacs-2021.3/src/gromacs/domdec/redistribute.cpp:744:9: note: Same expression used in consecutive assignments of 'home_pos_cg' and 'home_pos_at'.
gromacs-2021.3/src/gromacs/domdec/redistribute.cpp:743:9: note: Same expression used in consecutive assignments of 'home_pos_cg' and 'home_pos_at'.
gromacs-2021.3/src/gromacs/domdec/redistribute.cpp:923:24: style: Local variable 'nvr' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/redistribute.cpp:751:19: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/redistribute.cpp:923:24: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/redistribute.cpp:229:18: style: Variable 'x[a][ZZ]' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/domdec/redistribute.cpp:235:18: style: Variable 'v[a][ZZ]' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/domdec/redistribute.cpp:241:21: style: Variable 'cg_p[a][ZZ]' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/domdec/tests/haloexchange_mpi.cpp:510:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/domdec/tests/hashedmap.cpp:71:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/domdec/tests/localatomsetmanager.cpp:77:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/energyanalysis/tests/legacyenergy.cpp:83:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/domdec/partition.cpp:727:33: style: The scope of the variable 'dim' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/partition.cpp:1818:37: style: The scope of the variable 'dim' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/partition.cpp:1820:28: style: The scope of the variable 'c' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/partition.cpp:1827:37: style: The scope of the variable 'v_d' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/partition.cpp:2658:24: style: The scope of the variable 'step_pcoupl' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/partition.cpp:2665:24: style: The scope of the variable 'sbuf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/domdec/partition.cpp:333:21: style: Local variable 'pos' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/partition.cpp:172:13: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/partition.cpp:333:21: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/partition.cpp:866:21: style: Local variable 'pos' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/partition.cpp:800:17: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/partition.cpp:866:21: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/partition.cpp:2384:21: style: Local variable 'd' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/domdec/partition.cpp:2203:28: note: Shadowed declaration
gromacs-2021.3/src/gromacs/domdec/partition.cpp:2384:21: note: Shadow variable
gromacs-2021.3/src/gromacs/domdec/partition.cpp:1337:61: performance:inconclusive: Function parameter 'cginfo_mb' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/ewald/calculate_spline_moduli.cpp:87:73: style:inconclusive: Function 'make_bspline_moduli' argument 5 names different: declaration 'order' definition 'pme_order'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/ewald/calculate_spline_moduli.h:43:73: note: Function 'make_bspline_moduli' argument 5 names different: declaration 'order' definition 'pme_order'.
gromacs-2021.3/src/gromacs/ewald/calculate_spline_moduli.cpp:87:73: note: Function 'make_bspline_moduli' argument 5 names different: declaration 'order' definition 'pme_order'.
gromacs-2021.3/src/gromacs/essentialdynamics/edsam.cpp:2575:5: warning:inconclusive: Possible null pointer dereference: LegendStr [nullPointer]
gromacs-2021.3/src/gromacs/essentialdynamics/edsam.cpp:2520:30: note: Assignment 'LegendStr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/essentialdynamics/edsam.cpp:2575:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/essentialdynamics/edsam.cpp:1048:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/essentialdynamics/edsam.cpp:2179:28: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/essentialdynamics/edsam.cpp:2516:18: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/essentialdynamics/edsam.cpp:2716:15: style: The scope of the variable 'avindex' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/ewald.cpp:158:17: style: The scope of the variable 'lowiy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/ewald.cpp:158:24: style: The scope of the variable 'lowiz' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/ewald.cpp:333:10: style: The scope of the variable 'd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/ewald_utils.h:103:5: style: Class 'EwaldBoxZScaler' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/ewald/long_range_correction.cpp:88:18: style: The scope of the variable 'q' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/long_range_correction.cpp:138:22: style: Local variable 'q' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/ewald/long_range_correction.cpp:88:18: note: Shadowed declaration
gromacs-2021.3/src/gromacs/ewald/long_range_correction.cpp:138:22: note: Shadow variable
gromacs-2021.3/src/gromacs/ewald/long_range_correction.cpp:216:34: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/ewald/long_range_correction.cpp:88:12: note: Shadowed declaration
gromacs-2021.3/src/gromacs/ewald/long_range_correction.cpp:216:34: note: Shadow variable
gromacs-2021.3/src/gromacs/ewald/pme_gpu_3dfft.h:86:10: performance:inconclusive: Technically the member function 'GpuParallel3dFft::perform3dFft' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_3dfft_ocl.cpp:142:24: note: Technically the member function 'GpuParallel3dFft::perform3dFft' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/ewald/pme_gpu_3dfft.h:86:10: note: Technically the member function 'GpuParallel3dFft::perform3dFft' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/ewald/pme_gpu_internal.cpp:1117:27: style: Variable 'kernelPtr' is reassigned a value before the old one has been used. [redundantAssignment]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_internal.cpp:1114:27: note: kernelPtr is assigned
gromacs-2021.3/src/gromacs/ewald/pme_gpu_internal.cpp:1117:27: note: kernelPtr is overwritten
gromacs-2021.3/src/gromacs/ewald/pme_gpu_internal.cpp:951:60: style:inconclusive: Function 'pme_gpu_3dfft' argument 2 names different: declaration 'direction' definition 'dir'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_internal.h:367:65: note: Function 'pme_gpu_3dfft' argument 2 names different: declaration 'direction' definition 'dir'.
gromacs-2021.3/src/gromacs/ewald/pme_gpu_internal.cpp:951:60: note: Function 'pme_gpu_3dfft' argument 2 names different: declaration 'direction' definition 'dir'.
gromacs-2021.3/src/gromacs/ewald/pme_gpu_internal.cpp:951:75: style:inconclusive: Function 'pme_gpu_3dfft' argument 3 names different: declaration 'gridIndex' definition 'grid_index'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_internal.h:367:80: note: Function 'pme_gpu_3dfft' argument 3 names different: declaration 'gridIndex' definition 'grid_index'.
gromacs-2021.3/src/gromacs/ewald/pme_gpu_internal.cpp:951:75: note: Function 'pme_gpu_3dfft' argument 3 names different: declaration 'gridIndex' definition 'grid_index'.
gromacs-2021.3/src/gromacs/ewald/pme_gpu_internal.cpp:1164:43: style: Parameter 'h_grids' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::splineKernelSingle' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_internal.cpp:424:27: style: Variable 'kernelParamsPtr' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::splineKernelThPerAtom4Single' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::spreadKernelSingle' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::spreadKernelThPerAtom4Single' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::splineAndSpreadKernelSingle' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::splineAndSpreadKernelThPerAtom4Single' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::splineAndSpreadKernelWriteSplinesSingle' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::splineAndSpreadKernelWriteSplinesThPerAtom4Single' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::splineKernelDual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::splineKernelThPerAtom4Dual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::spreadKernelDual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::spreadKernelThPerAtom4Dual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::splineAndSpreadKernelDual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::splineAndSpreadKernelThPerAtom4Dual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::splineAndSpreadKernelWriteSplinesDual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::splineAndSpreadKernelWriteSplinesThPerAtom4Dual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::gatherKernelSingle' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::gatherKernelThPerAtom4Single' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::gatherKernelReadSplinesSingle' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::gatherKernelReadSplinesThPerAtom4Single' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::gatherKernelDual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::gatherKernelThPerAtom4Dual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::gatherKernelReadSplinesDual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::gatherKernelReadSplinesThPerAtom4Dual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::solveYZXKernelA' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::solveXYZKernelA' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::solveYZXEnergyKernelA' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::solveXYZEnergyKernelA' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::solveYZXKernelB' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::solveXYZKernelB' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::solveYZXEnergyKernelB' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl.cpp:48:20: warning: Member variable 'PmeGpuProgramImpl::solveXYZEnergyKernelB' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:56:20: warning: Member variable 'PmeGpuProgramImpl::splineKernelThPerAtom4Single' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:56:20: warning: Member variable 'PmeGpuProgramImpl::spreadKernelThPerAtom4Single' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:56:20: warning: Member variable 'PmeGpuProgramImpl::splineAndSpreadKernelThPerAtom4Single' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:56:20: warning: Member variable 'PmeGpuProgramImpl::splineAndSpreadKernelWriteSplinesThPerAtom4Single' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:56:20: warning: Member variable 'PmeGpuProgramImpl::splineKernelThPerAtom4Dual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:56:20: warning: Member variable 'PmeGpuProgramImpl::spreadKernelThPerAtom4Dual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:56:20: warning: Member variable 'PmeGpuProgramImpl::splineAndSpreadKernelThPerAtom4Dual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:56:20: warning: Member variable 'PmeGpuProgramImpl::splineAndSpreadKernelWriteSplinesThPerAtom4Dual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:56:20: warning: Member variable 'PmeGpuProgramImpl::gatherKernelThPerAtom4Single' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:56:20: warning: Member variable 'PmeGpuProgramImpl::gatherKernelReadSplinesThPerAtom4Single' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:56:20: warning: Member variable 'PmeGpuProgramImpl::gatherKernelThPerAtom4Dual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:56:20: warning: Member variable 'PmeGpuProgramImpl::gatherKernelReadSplinesThPerAtom4Dual' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:243:10: style: The scope of the variable 'ix' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:243:14: style: The scope of the variable 'iy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:243:18: style: The scope of the variable 'iz' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:244:10: style: The scope of the variable 'pmeidx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:244:18: style: The scope of the variable 'fftidx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:322:27: style: The scope of the variable 'ix' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:322:31: style: The scope of the variable 'iy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:323:10: style: The scope of the variable 'pmeidx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:323:18: style: The scope of the variable 'fftidx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:376:31: style: The scope of the variable 'ny_x' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:433:31: style: The scope of the variable 'ny_x' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:649:13: style: The scope of the variable 'x' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:649:16: style: The scope of the variable 'y' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:649:19: style: The scope of the variable 'z' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_grid.cpp:839:12: style: The scope of the variable 't' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_load_balancing.cpp:909:52: performance:inconclusive: Function parameter 'x' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/ewald/pme_only.cpp:508:16: style: Condition 'status==pmerecvqxX' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/ewald/pme_only.cpp:505:14: note: Assignment 'status=pmerecvqxX', assigned value is 0
gromacs-2021.3/src/gromacs/ewald/pme_only.cpp:508:16: note: Condition 'status==pmerecvqxX' is always true
gromacs-2021.3/src/gromacs/ewald/pme_only.cpp:264:9: style: The scope of the variable 'nat' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_only.cpp:617:13: style: The scope of the variable 'cycles' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme.cpp:605:25: style: Condition 'pme->nnodes!=numPmeDomains.x*numPmeDomains.y' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/ewald/pme.cpp:591:20: note: Assignment 'pme->nnodes=1', assigned value is 1
gromacs-2021.3/src/gromacs/ewald/pme.cpp:597:43: note: Assuming that condition 'numPmeDomains.x*numPmeDomains.y>1' is not redundant
gromacs-2021.3/src/gromacs/ewald/pme.cpp:605:25: note: Condition 'pme->nnodes!=numPmeDomains.x*numPmeDomains.y' is always true
gromacs-2021.3/src/gromacs/ewald/pme.cpp:615:21: style: Condition 'pme->nnodes==1' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/ewald/pme.cpp:591:20: note: Assignment 'pme->nnodes=1', assigned value is 1
gromacs-2021.3/src/gromacs/ewald/pme.cpp:615:21: note: Condition 'pme->nnodes==1' is always true
gromacs-2021.3/src/gromacs/ewald/pme_pp.cpp:385:9: portability: Using memset() on struct which contains a floating point number. [memsetClassFloat]
gromacs-2021.3/src/gromacs/ewald/pme.cpp:271:9: style: The scope of the variable 'fw' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme.cpp:271:13: style: The scope of the variable 'bw' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_pp.cpp:470:9: style:inconclusive: Found duplicate branches for 'if' and 'else'. [duplicateBranch]
gromacs-2021.3/src/gromacs/ewald/pme_pp.cpp:477:9: note: Found duplicate branches for 'if' and 'else'.
gromacs-2021.3/src/gromacs/ewald/pme_pp.cpp:470:9: note: Found duplicate branches for 'if' and 'else'.
gromacs-2021.3/src/gromacs/ewald/pme.cpp:1030:26: style: The scope of the variable 'd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_pp.cpp:119:27: style: The scope of the variable 'cnb' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme.cpp:1043:26: style: The scope of the variable 'fep_state' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_pp.cpp:295:53: style:inconclusive: Function 'gmx_pme_send_coordinates' argument 10 names different: declaration 'reinitGpuPmePpComms' definition 'receiveCoordinateAddressFromPme'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/ewald/pme_pp.h:88:53: note: Function 'gmx_pme_send_coordinates' argument 10 names different: declaration 'reinitGpuPmePpComms' definition 'receiveCoordinateAddressFromPme'.
gromacs-2021.3/src/gromacs/ewald/pme_pp.cpp:295:53: note: Function 'gmx_pme_send_coordinates' argument 10 names different: declaration 'reinitGpuPmePpComms' definition 'receiveCoordinateAddressFromPme'.
gromacs-2021.3/src/gromacs/ewald/pme.cpp:946:5: style: Local variable 'reuse_pmegrids' shadows outer function [shadowFunction]
gromacs-2021.3/src/gromacs/ewald/pme_grid.h:101:6: note: Shadowed declaration
gromacs-2021.3/src/gromacs/ewald/pme.cpp:946:5: note: Shadow variable
gromacs-2021.3/src/gromacs/ewald/pme.cpp:1064:18: style: Local variable 'd' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/ewald/pme.cpp:1030:26: note: Shadowed declaration
gromacs-2021.3/src/gromacs/ewald/pme.cpp:1064:18: note: Shadow variable
gromacs-2021.3/src/gromacs/ewald/pme.cpp:1066:26: style: Local variable 'atc' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/ewald/pme.cpp:1031:26: note: Shadowed declaration
gromacs-2021.3/src/gromacs/ewald/pme.cpp:1066:26: note: Shadow variable
gromacs-2021.3/src/gromacs/ewald/pme.cpp:950:102: performance:inconclusive: Function parameter 'q' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/ewald/pme_redistribute.cpp:288:45: style: The scope of the variable 'node' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_redistribute.cpp:339:21: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/ewald/pme_redistribute.cpp:288:22: note: Shadowed declaration
gromacs-2021.3/src/gromacs/ewald/pme_redistribute.cpp:339:21: note: Shadow variable
gromacs-2021.3/src/gromacs/ewald/pme_redistribute.cpp:415:25: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/ewald/pme_redistribute.cpp:390:42: note: Shadowed declaration
gromacs-2021.3/src/gromacs/ewald/pme_redistribute.cpp:415:25: note: Shadow variable
gromacs-2021.3/src/gromacs/ewald/pme_redistribute.cpp:434:25: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/ewald/pme_redistribute.cpp:390:42: note: Shadowed declaration
gromacs-2021.3/src/gromacs/ewald/pme_redistribute.cpp:434:25: note: Shadow variable
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:68:17: style: The scope of the variable 'idxptr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:68:25: style: The scope of the variable 'tix' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:68:30: style: The scope of the variable 'tiy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:68:35: style: The scope of the variable 'tiz' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:69:17: style: The scope of the variable 'xptr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:70:17: style: The scope of the variable 'fptr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:186:25: style: The scope of the variable 'end' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:278:14: style: The scope of the variable 'ii' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:333:23: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:472:34: style: The scope of the variable 'fx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:472:46: style: The scope of the variable 'tx1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:472:61: style: The scope of the variable 'ox' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:477:32: style: The scope of the variable 'pmegrid_g' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:703:10: style: The scope of the variable 'send_index0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:708:9: style: The scope of the variable 'recv_size_y' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:709:9: style: The scope of the variable 'size_yx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_spread.cpp:271:38: style: Parameter 'fractx' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/ewald/tests/pmebsplinetest.cpp:125:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/ewald/pme_solve.cpp:337:34: style: The scope of the variable 'ky' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_solve.cpp:337:38: style: The scope of the variable 'kz' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_solve.cpp:338:59: style: The scope of the variable 'iy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_solve.cpp:338:63: style: The scope of the variable 'iz' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_solve.cpp:338:76: style: The scope of the variable 'kxend' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_solve.cpp:600:34: style: The scope of the variable 'ky' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_solve.cpp:600:38: style: The scope of the variable 'kz' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_solve.cpp:601:42: style: The scope of the variable 'iy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_solve.cpp:601:63: style: The scope of the variable 'iz' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_solve.cpp:601:67: style: The scope of the variable 'kxstart' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_solve.cpp:601:76: style: The scope of the variable 'kxend' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/ewald/pme_solve.cpp:590:39: style: Parameter 'grid' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/ewald/tests/pmegathertest.cpp:355:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/ewald/tests/pmesolvetest.cpp:259:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/ewald/tests/pmesplinespreadtest.cpp:279:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/ewald/tests/pmetestcommon.cpp:926:36: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/fft/fft.cpp:117:23: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft.cpp:134:23: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft.cpp:167:17: style: The scope of the variable 'done2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft.cpp:168:10: style: The scope of the variable 'i1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft.cpp:168:14: style: The scope of the variable 'i1c' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft.cpp:168:28: style: The scope of the variable 'kmi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft.cpp:68:37: style:inconclusive: Function 'gmx_fft_init_many_1d' argument 1 names different: declaration 'fft' definition 'pfft'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft.h:146:37: note: Function 'gmx_fft_init_many_1d' argument 1 names different: declaration 'fft' definition 'pfft'.
gromacs-2021.3/src/gromacs/fft/fft.cpp:68:37: note: Function 'gmx_fft_init_many_1d' argument 1 names different: declaration 'fft' definition 'pfft'.
gromacs-2021.3/src/gromacs/fft/fft.cpp:91:42: style:inconclusive: Function 'gmx_fft_init_many_1d_real' argument 1 names different: declaration 'fft' definition 'pfft'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft.h:177:42: note: Function 'gmx_fft_init_many_1d_real' argument 1 names different: declaration 'fft' definition 'pfft'.
gromacs-2021.3/src/gromacs/fft/fft.cpp:91:42: note: Function 'gmx_fft_init_many_1d_real' argument 1 names different: declaration 'fft' definition 'pfft'.
gromacs-2021.3/src/gromacs/fft/fft.cpp:114:31: style:inconclusive: Function 'gmx_fft_many_1d' argument 1 names different: declaration 'setup' definition 'fft'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft.h:238:31: note: Function 'gmx_fft_many_1d' argument 1 names different: declaration 'setup' definition 'fft'.
gromacs-2021.3/src/gromacs/fft/fft.cpp:114:31: note: Function 'gmx_fft_many_1d' argument 1 names different: declaration 'setup' definition 'fft'.
gromacs-2021.3/src/gromacs/fft/fft.cpp:131:36: style:inconclusive: Function 'gmx_fft_many_1d_real' argument 1 names different: declaration 'setup' definition 'fft'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft.h:287:36: note: Function 'gmx_fft_many_1d_real' argument 1 names different: declaration 'setup' definition 'fft'.
gromacs-2021.3/src/gromacs/fft/fft.cpp:131:36: note: Function 'gmx_fft_many_1d_real' argument 1 names different: declaration 'setup' definition 'fft'.
gromacs-2021.3/src/gromacs/fft/fft.cpp:149:37: style:inconclusive: Function 'gmx_many_fft_destroy' argument 1 names different: declaration 'setup' definition 'fft'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft.h:338:37: note: Function 'gmx_many_fft_destroy' argument 1 names different: declaration 'setup' definition 'fft'.
gromacs-2021.3/src/gromacs/fft/fft.cpp:149:37: note: Function 'gmx_many_fft_destroy' argument 1 names different: declaration 'setup' definition 'fft'.
gromacs-2021.3/src/gromacs/fft/fft_fftpack.cpp:192:11: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft_fftw3.cpp:137:9: error: There is an unknown macro here somewhere. Configuration is required. If GMX_CATCH_ALL_AND_EXIT_WITH_FATAL_ERROR is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/fft/fft_mkl.cpp:161:16: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/gromacs/fft/fft_mkl.cpp:156:16: note: First condition
gromacs-2021.3/src/gromacs/fft/fft_mkl.cpp:161:16: note: Second condition
gromacs-2021.3/src/gromacs/fft/fft_mkl.cpp:563:9: style: The scope of the variable 'd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/tests/fft.cpp:177:1: error: syntax error [syntaxError]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:13761:9: warning: Assignment of function parameter has no effect outside the function. Did you forget dereferencing it? [uselessAssignmentPtrArg]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:13874:9: warning: Assignment of function parameter has no effect outside the function. Did you forget dereferencing it? [uselessAssignmentPtrArg]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:7553:5: error: Address of local auto-variable assigned to a function parameter. [autoVariables]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:7594:5: error: Address of local auto-variable assigned to a function parameter. [autoVariables]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:8022:5: error: Address of local auto-variable assigned to a function parameter. [autoVariables]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:15187:17: portability: Non reentrant function 'localtime' called. For threadsafe applications it is recommended to use the reentrant replacement function 'localtime_r'. [prohibitedlocaltimeCalled]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:10617:21: warning: Identical inner 'if' condition is always true. [identicalInnerCondition]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:10615:20: note: outer condition: file_pos>0
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:10617:21: note: identical inner condition: file_pos>0
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:10646:21: warning: Identical inner 'if' condition is always true. [identicalInnerCondition]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:10644:20: note: outer condition: file_pos>0
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:10646:21: note: identical inner condition: file_pos>0
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:10676:21: warning: Identical inner 'if' condition is always true. [identicalInnerCondition]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:10674:20: note: outer condition: file_pos>0
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:10676:21: note: identical inner condition: file_pos>0
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:1048:59: style: Condition '*((const char*)&block->header_contents_size)!=0x00' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:1049:65: style: Condition '*((const char*)(&block->header_contents_size)+7)==0x00' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14399:21: style: Condition 'first_frame!=frame_set->first_frame' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14389:17: note: first_frame is assigned 'frame_set->first_frame' here.
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14392:13: note: Assuming condition is false
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14399:21: note: Condition 'first_frame!=frame_set->first_frame' is always false
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14402:21: style: Condition 'first_frame!=frame_set->first_frame' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14389:17: note: first_frame is assigned 'frame_set->first_frame' here.
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14392:13: note: Assuming condition is false
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14402:21: note: Condition 'first_frame!=frame_set->first_frame' is always false
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14749:20: style: Condition 'first_frame!=frame_set->first_frame' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14730:17: note: first_frame is assigned 'frame_set->first_frame' here.
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14733:13: note: Assuming condition is false
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14749:20: note: Condition 'first_frame!=frame_set->first_frame' is always false
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:3613:17: error: Memory leak: frame_set.molecule_cnt_list [memleak]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:3986:17: error: Memory leak: mapping.real_particle_numbers [memleak]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:5418:9: error: Memory leak: data.block_name [memleak]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:9287:13: error: Memory leak: dest.input_file_path [memleak]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:9376:5: error: Memory leak: dest.output_file_path [memleak]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4291:47: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4300:41: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4345:47: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4355:51: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4364:41: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4374:45: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4386:47: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4393:41: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4432:47: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4441:41: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4486:47: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4495:51: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4504:41: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4513:45: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4525:47: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4534:41: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4602:17: portability:inconclusive: Casting from float * to char * is not portable due to different binary data representations on different platforms. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4617:17: portability:inconclusive: Casting from double * to char * is not portable due to different binary data representations on different platforms. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:6038:34: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:6091:34: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14062:55: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14080:55: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14130:45: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14142:45: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14620:55: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14632:45: portability: Casting between char * and float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14661:55: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:14673:45: portability: Casting between char * and double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:15161:5: style:inconclusive: Found duplicate branches for 'if' and 'else'. [duplicateBranch]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:15165:5: note: Found duplicate branches for 'if' and 'else'.
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:15161:5: note: Found duplicate branches for 'if' and 'else'.
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4319:86: style: Same expression on both sides of '||'. [duplicateExpression]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4460:86: style: Same expression on both sides of '||'. [duplicateExpression]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:1588:33: warning: Either the condition 'enerhist!=nullptr' is redundant or there is possible null pointer dereference: enerhist. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:1583:23: note: Assuming that condition 'enerhist!=nullptr' is not redundant
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:1588:33: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:722:37: warning: Possible null pointer dereference: nptr [nullPointer]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:848:91: note: Calling function 'doVectorLow < real , std :: allocator < real > >', 6th argument 'nullptr' value is 0
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:722:37: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:726:36: warning: Possible null pointer dereference: vector [nullPointer]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:849:61: note: Calling function 'doVectorLow < real , std :: allocator < real > >', 8th argument 'nullptr' value is 0
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:726:36: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:722:37: warning: Possible null pointer dereference: nptr [nullPointer]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:913:77: note: Calling function 'doVectorLow < int , std :: allocator < int > >', 6th argument 'nullptr' value is 0
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:722:37: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:726:36: warning: Possible null pointer dereference: vector [nullPointer]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:913:89: note: Calling function 'doVectorLow < int , std :: allocator < int > >', 8th argument 'nullptr' value is 0
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:726:36: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:722:37: warning: Possible null pointer dereference: nptr [nullPointer]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:932:83: note: Calling function 'doVectorLow < double , std :: allocator < double > >', 6th argument 'nullptr' value is 0
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:722:37: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:726:36: warning: Possible null pointer dereference: vector [nullPointer]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:933:56: note: Calling function 'doVectorLow < double , std :: allocator < double > >', 8th argument 'nullptr' value is 0
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:726:36: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:620:29: portability: Casting between char * and const float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:635:29: portability: Casting between char * and const double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:648:23: portability: Casting between const char * and const double * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:658:22: portability: Casting between const char * and const float * which have an incompatible binary data representation. [invalidPointerCast]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:803:21: portability:inconclusive: Casting from double * to char * is not portable due to different binary data representations on different platforms. [invalidPointerCast]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:482:10: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:962:15: style: The scope of the variable 'reti' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:2525:15: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:2243:62: style:inconclusive: Function 'write_checkpoint_data' argument 7 names different: declaration 'notifier' definition 'mdModulesNotifier'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/checkpoint.h:252:62: note: Function 'write_checkpoint_data' argument 7 names different: declaration 'notifier' definition 'mdModulesNotifier'.
gromacs-2021.3/src/gromacs/fileio/checkpoint.cpp:2243:62: note: Function 'write_checkpoint_data' argument 7 names different: declaration 'notifier' definition 'mdModulesNotifier'.
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4233:32: style: Variable 'algo_find_n_frames' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4569:20: style: Variable 'd_dest' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:4570:19: style: Variable 'f_dest' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/fileio/confio.cpp:435:11: warning: Either the condition 'x==nullptr' is redundant or there is possible null pointer dereference: x. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/fileio/confio.cpp:430:11: note: Assuming that condition 'x==nullptr' is not redundant
gromacs-2021.3/src/gromacs/fileio/confio.cpp:435:11: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/confio.cpp:213:16: style: The scope of the variable 'g96_line' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/espio.cpp:359:27: style: Condition 'level==2' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/fileio/espio.cpp:357:26: note: Assuming that condition 'level==2' is not redundant
gromacs-2021.3/src/gromacs/fileio/espio.cpp:359:27: note: Condition 'level==2' is always true
gromacs-2021.3/src/gromacs/fileio/espio.cpp:404:61: style: Condition '!bFoundParticles' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/fileio/espio.cpp:402:49: note: Assuming that condition '!bFoundParticles' is not redundant
gromacs-2021.3/src/gromacs/fileio/espio.cpp:404:61: note: Condition '!bFoundParticles' is always true
gromacs-2021.3/src/gromacs/fileio/espio.cpp:105:10: style: The scope of the variable 'word' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/espio.cpp:131:10: style: The scope of the variable 'word' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/filetypes.cpp:271:17: style: The scope of the variable 'eptr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/g96io.cpp:61:48: style: The scope of the variable 'oldres' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/g96io.cpp:61:56: style: The scope of the variable 'newres' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/g96io.cpp:61:64: style: The scope of the variable 'shift' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/g96io.cpp:62:14: style: The scope of the variable 'anm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/g96io.cpp:62:27: style: The scope of the variable 'resnm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/g96io.cpp:175:36: style: The scope of the variable 'shift' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:348:18: style: The scope of the variable 'nm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:447:14: style: The scope of the variable 'magic' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:449:17: style: The scope of the variable 'zero' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:807:23: style: The scope of the variable 'fr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:884:12: style: The scope of the variable 'ne' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:884:16: style: The scope of the variable 'ns' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:885:12: style: The scope of the variable 'esum_all' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:885:22: style: The scope of the variable 'eav_all' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1158:24: style: The scope of the variable 'boxvel_nm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1164:18: style: The scope of the variable 'ind0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1165:18: style: The scope of the variable 'ind1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1166:31: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1166:34: style: The scope of the variable 'ni' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1167:18: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1168:18: style: The scope of the variable 'bufi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1324:13: style: The scope of the variable 'ii' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1325:17: style: The scope of the variable 'len' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1409:10: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1409:13: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1409:16: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1410:10: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1410:19: style: The scope of the variable 'bs' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:251:32: style:inconclusive: Function 'init_enxframe' argument 1 names different: declaration 'ef' definition 'fr'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/enxio.h:158:32: note: Function 'init_enxframe' argument 1 names different: declaration 'ef' definition 'fr'.
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:251:32: note: Function 'init_enxframe' argument 1 names different: declaration 'ef' definition 'fr'.
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:265:32: style:inconclusive: Function 'free_enxframe' argument 1 names different: declaration 'ef' definition 'fr'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/enxio.h:160:32: note: Function 'free_enxframe' argument 1 names different: declaration 'ef' definition 'fr'.
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:265:32: note: Function 'free_enxframe' argument 1 names different: declaration 'ef' definition 'fr'.
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:280:38: style:inconclusive: Function 'add_blocks_enxframe' argument 1 names different: declaration 'ef' definition 'fr'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/enxio.h:192:38: note: Function 'add_blocks_enxframe' argument 1 names different: declaration 'ef' definition 'fr'.
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:280:38: note: Function 'add_blocks_enxframe' argument 1 names different: declaration 'ef' definition 'fr'.
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:388:56: style:inconclusive: Function 'do_enxnms' argument 3 names different: declaration 'enms' definition 'nms'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/enxio.h:173:56: note: Function 'do_enxnms' argument 3 names different: declaration 'enms' definition 'nms'.
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:388:56: note: Function 'do_enxnms' argument 3 names different: declaration 'enms' definition 'nms'.
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1070:13: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:956:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1070:13: note: Shadow variable
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1164:18: style: Variable 'ind0' can be declared with const [constVariable]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:1165:18: style: Variable 'ind1' can be declared with const [constVariable]
gromacs-2021.3/src/gromacs/fileio/enxio.cpp:296:72: style: Parameter 'prev' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:125:9: warning: Either the condition '!open_files' is redundant or there is possible null pointer dereference: open_files. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:122:9: note: Assuming that condition '!open_files' is not redundant
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:125:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:126:9: warning: Either the condition '!open_files' is redundant or there is possible null pointer dereference: open_files. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:122:9: note: Assuming that condition '!open_files' is not redundant
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:126:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:127:9: warning: Either the condition '!open_files' is redundant or there is possible null pointer dereference: open_files. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:122:9: note: Assuming that condition '!open_files' is not redundant
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:127:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:128:9: warning: Either the condition '!open_files' is redundant or there is possible null pointer dereference: open_files. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:122:9: note: Assuming that condition '!open_files' is not redundant
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:128:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:370:29: style:inconclusive: Function 'gmx_fio_close' argument 1 names different: declaration 'fp' definition 'fio'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/gmxfio.h:69:29: note: Function 'gmx_fio_close' argument 1 names different: declaration 'fp' definition 'fio'.
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:370:29: note: Function 'gmx_fio_close' argument 1 names different: declaration 'fp' definition 'fio'.
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:389:32: style:inconclusive: Function 'gmx_fio_fp_close' argument 1 names different: declaration 'fp' definition 'fio'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/gmxfio.h:75:32: note: Function 'gmx_fio_fp_close' argument 1 names different: declaration 'fp' definition 'fio'.
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:389:32: note: Function 'gmx_fio_fp_close' argument 1 names different: declaration 'fp' definition 'fio'.
gromacs-2021.3/src/gromacs/fileio/gmxfio.cpp:416:26: style: Parameter 'fp' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/fileio/gmxfio_xdr.cpp:291:44: portability:inconclusive: Casting from double * to char * is not portable due to different binary data representations on different platforms. [invalidPointerCast]
gromacs-2021.3/src/gromacs/fileio/gmxfio_xdr.cpp:311:44: portability:inconclusive: Casting from float * to char * is not portable due to different binary data representations on different platforms. [invalidPointerCast]
gromacs-2021.3/src/gromacs/fileio/gmxfio_xdr.cpp:584:50: style:inconclusive: Function 'gmx_fio_doe_opaque' argument 2 names different: declaration 'item' definition 'data'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/gmxfio_xdr.h:82:46: note: Function 'gmx_fio_doe_opaque' argument 2 names different: declaration 'item' definition 'data'.
gromacs-2021.3/src/gromacs/fileio/gmxfio_xdr.cpp:584:50: note: Function 'gmx_fio_doe_opaque' argument 2 names different: declaration 'item' definition 'data'.
gromacs-2021.3/src/gromacs/fileio/gmxfio_xdr.cpp:353:19: style: Local variable 'cptr' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/fileio/gmxfio_xdr.cpp:135:27: note: Shadowed declaration
gromacs-2021.3/src/gromacs/fileio/gmxfio_xdr.cpp:353:19: note: Shadow variable
gromacs-2021.3/src/gromacs/fileio/groio.cpp:213:14: warning:inconclusive: The buffer 'oldresname' may not be null-terminated after the call to strncpy(). [terminateStrncpy]
gromacs-2021.3/src/gromacs/fileio/groio.cpp:472:9: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/groio.cpp:472:16: style: The scope of the variable 'resind' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/matio.cpp:1007:38: warning: Either the condition 'c<0' is redundant or the array 'mapper[89]' is accessed at index -1, which is out of bounds. [negativeIndex]
gromacs-2021.3/src/gromacs/fileio/matio.cpp:994:24: note: Assuming that condition 'c<0' is not redundant
gromacs-2021.3/src/gromacs/fileio/matio.cpp:1007:38: note: Negative array index
gromacs-2021.3/src/gromacs/fileio/matio.cpp:149:9: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/fileio/matio.cpp:225:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/matio.cpp:797:13: style: The scope of the variable 'nlo' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/matio.cpp:1162:35: style:inconclusive: Function 'write_xpm' argument 9 names different: declaration 't_x' definition 'axis_x'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/matio.h:207:35: note: Function 'write_xpm' argument 9 names different: declaration 't_x' definition 'axis_x'.
gromacs-2021.3/src/gromacs/fileio/matio.cpp:1162:35: note: Function 'write_xpm' argument 9 names different: declaration 't_x' definition 'axis_x'.
gromacs-2021.3/src/gromacs/fileio/matio.cpp:1163:35: style:inconclusive: Function 'write_xpm' argument 10 names different: declaration 't_y' definition 'axis_y'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/matio.h:208:35: note: Function 'write_xpm' argument 10 names different: declaration 't_y' definition 'axis_y'.
gromacs-2021.3/src/gromacs/fileio/matio.cpp:1163:35: note: Function 'write_xpm' argument 10 names different: declaration 't_y' definition 'axis_y'.
gromacs-2021.3/src/gromacs/fileio/matio.cpp:897:18: style: Variable 'c' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/fileio/md5.cpp:439:17: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/fileio/md5.cpp:427:29: note: Shadowed declaration
gromacs-2021.3/src/gromacs/fileio/md5.cpp:439:17: note: Shadow variable
gromacs-2021.3/src/gromacs/fileio/mrcdensitymap.cpp:176:67: style:inconclusive: Function 'Impl' argument 1 names different: declaration 'fileName' definition 'filename'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/mrcdensitymap.cpp:166:38: note: Function 'Impl' argument 1 names different: declaration 'fileName' definition 'filename'.
gromacs-2021.3/src/gromacs/fileio/mrcdensitymap.cpp:176:67: note: Function 'Impl' argument 1 names different: declaration 'fileName' definition 'filename'.
gromacs-2021.3/src/gromacs/fileio/mrcdensitymap.cpp:252:97: performance:inconclusive: Function parameter 'data' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/fileio/mrcdensitymap.cpp:283:83: performance:inconclusive: Function parameter 'data' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/fileio/mrcserializer.cpp:149:5: error: Found a exit path from function with non-void return type that has missing return statement [missingReturn]
gromacs-2021.3/src/gromacs/fileio/mrcserializer.cpp:306:87: style:inconclusive: Function 'serializeMrcDensityMapHeader' argument 2 names different: declaration 'mrcHeader' definition 'mrcFile'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/mrcserializer.h:54:87: note: Function 'serializeMrcDensityMapHeader' argument 2 names different: declaration 'mrcHeader' definition 'mrcFile'.
gromacs-2021.3/src/gromacs/fileio/mrcserializer.cpp:306:87: note: Function 'serializeMrcDensityMapHeader' argument 2 names different: declaration 'mrcHeader' definition 'mrcFile'.
gromacs-2021.3/src/gromacs/fileio/oenv.cpp:210:5: error: There is an unknown macro here somewhere. Configuration is required. If GMX_CATCH_ALL_AND_EXIT_WITH_FATAL_ERROR is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/fileio/mtxio.cpp:85:18: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/mtxio.cpp:86:15: style: The scope of the variable 'sz' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/mtxio.cpp:155:15: style: The scope of the variable 'sz' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1306:13: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1220:13: note: First condition
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1306:13: note: Second condition
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:321:22: style: Condition 'P[1]>0' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:207:20: note: Assignment 'P[1]=1', assigned value is 1
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:239:28: note: Assuming condition is false
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:321:22: note: Condition 'P[1]>0' is always true
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1176:13: style: Condition 'bParallelDim' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1165:28: note: Assignment 'bParallelDim=0', assigned value is 0
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1176:13: note: Condition 'bParallelDim' is always false
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:770:22: style: The scope of the variable 'in_z' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/tests/checkpoint.cpp:67:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:770:28: style: The scope of the variable 'out_z' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:835:22: style: The scope of the variable 'out_x' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:835:29: style: The scope of the variable 'in_x' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:899:22: style: The scope of the variable 'out_z' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:142:5: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:899:29: style: The scope of the variable 'in_z' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1120:36: style: The scope of the variable 'bParallelDim' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:158:45: style:inconclusive: Function 'fft5d_plan_3d' argument 1 names different: declaration 'N' definition 'NG'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:131:38: note: Function 'fft5d_plan_3d' argument 1 names different: declaration 'N' definition 'NG'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:158:45: note: Function 'fft5d_plan_3d' argument 1 names different: declaration 'N' definition 'NG'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:159:45: style:inconclusive: Function 'fft5d_plan_3d' argument 2 names different: declaration 'M' definition 'MG'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:132:38: note: Function 'fft5d_plan_3d' argument 2 names different: declaration 'M' definition 'MG'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:159:45: note: Function 'fft5d_plan_3d' argument 2 names different: declaration 'M' definition 'MG'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:160:45: style:inconclusive: Function 'fft5d_plan_3d' argument 3 names different: declaration 'K' definition 'KG'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:133:38: note: Function 'fft5d_plan_3d' argument 3 names different: declaration 'K' definition 'KG'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:160:45: note: Function 'fft5d_plan_3d' argument 3 names different: declaration 'K' definition 'KG'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:163:45: style:inconclusive: Function 'fft5d_plan_3d' argument 6 names different: declaration 'lin' definition 'rlin'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:136:38: note: Function 'fft5d_plan_3d' argument 6 names different: declaration 'lin' definition 'rlin'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:163:45: note: Function 'fft5d_plan_3d' argument 6 names different: declaration 'lin' definition 'rlin'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:164:45: style:inconclusive: Function 'fft5d_plan_3d' argument 7 names different: declaration 'lin2' definition 'rlout'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:137:38: note: Function 'fft5d_plan_3d' argument 7 names different: declaration 'lin2' definition 'rlout'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:164:45: note: Function 'fft5d_plan_3d' argument 7 names different: declaration 'lin2' definition 'rlout'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:165:45: style:inconclusive: Function 'fft5d_plan_3d' argument 8 names different: declaration 'lout2' definition 'rlout2'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:138:38: note: Function 'fft5d_plan_3d' argument 8 names different: declaration 'lout2' definition 'rlout2'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:165:45: note: Function 'fft5d_plan_3d' argument 8 names different: declaration 'lout2' definition 'rlout2'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:137:37: style: The scope of the variable 'sg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:166:45: style:inconclusive: Function 'fft5d_plan_3d' argument 9 names different: declaration 'lout3' definition 'rlout3'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:139:38: note: Function 'fft5d_plan_3d' argument 9 names different: declaration 'lout3' definition 'rlout3'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:166:45: note: Function 'fft5d_plan_3d' argument 9 names different: declaration 'lout3' definition 'rlout3'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:138:13: style: The scope of the variable 'fa' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1488:43: style:inconclusive: Function 'fft5d_plan_3d_cart' argument 1 names different: declaration 'N' definition 'NG'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:144:43: note: Function 'fft5d_plan_3d_cart' argument 1 names different: declaration 'N' definition 'NG'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1488:43: note: Function 'fft5d_plan_3d_cart' argument 1 names different: declaration 'N' definition 'NG'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:138:17: style: The scope of the variable 'fb' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1489:43: style:inconclusive: Function 'fft5d_plan_3d_cart' argument 2 names different: declaration 'M' definition 'MG'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:145:43: note: Function 'fft5d_plan_3d_cart' argument 2 names different: declaration 'M' definition 'MG'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1489:43: note: Function 'fft5d_plan_3d_cart' argument 2 names different: declaration 'M' definition 'MG'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:138:45: style: The scope of the variable 'cosa' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1490:43: style:inconclusive: Function 'fft5d_plan_3d_cart' argument 3 names different: declaration 'K' definition 'KG'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:146:43: note: Function 'fft5d_plan_3d_cart' argument 3 names different: declaration 'K' definition 'KG'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1490:43: note: Function 'fft5d_plan_3d_cart' argument 3 names different: declaration 'K' definition 'KG'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:138:51: style: The scope of the variable 'cosb' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1494:43: style:inconclusive: Function 'fft5d_plan_3d_cart' argument 7 names different: declaration 'lin' definition 'rlin'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:150:43: note: Function 'fft5d_plan_3d_cart' argument 7 names different: declaration 'lin' definition 'rlin'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1494:43: note: Function 'fft5d_plan_3d_cart' argument 7 names different: declaration 'lin' definition 'rlin'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:138:57: style: The scope of the variable 'cosg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1495:43: style:inconclusive: Function 'fft5d_plan_3d_cart' argument 8 names different: declaration 'lin2' definition 'rlout'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:151:43: note: Function 'fft5d_plan_3d_cart' argument 8 names different: declaration 'lin2' definition 'rlout'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1495:43: note: Function 'fft5d_plan_3d_cart' argument 8 names different: declaration 'lin2' definition 'rlout'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:138:63: style: The scope of the variable 'sing' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1496:43: style:inconclusive: Function 'fft5d_plan_3d_cart' argument 9 names different: declaration 'lout2' definition 'rlout2'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:152:43: note: Function 'fft5d_plan_3d_cart' argument 9 names different: declaration 'lout2' definition 'rlout2'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1496:43: note: Function 'fft5d_plan_3d_cart' argument 9 names different: declaration 'lout2' definition 'rlout2'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:270:21: style: The scope of the variable 'altloc' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/tests/confio.cpp:196:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1497:43: style:inconclusive: Function 'fft5d_plan_3d_cart' argument 10 names different: declaration 'lout3' definition 'rlout3'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:153:43: note: Function 'fft5d_plan_3d_cart' argument 10 names different: declaration 'lout3' definition 'rlout3'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1497:43: note: Function 'fft5d_plan_3d_cart' argument 10 names different: declaration 'lout3' definition 'rlout3'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:478:27: style: The scope of the variable 'len' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1544:104: style:inconclusive: Function 'fft5d_compare_data' argument 5 names different: declaration 'normarlize' definition 'normalize'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fft/fft5d.h:155:110: note: Function 'fft5d_compare_data' argument 5 names different: declaration 'normarlize' definition 'normalize'.
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:1544:104: note: Function 'fft5d_compare_data' argument 5 names different: declaration 'normarlize' definition 'normalize'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:707:9: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fft/fft5d.cpp:161:45: style: Parameter 'comm' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:801:19: style: The scope of the variable 'line_type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:261:43: style:inconclusive: Function 'write_pdbfile_indexed' argument 7 names different: declaration 'chain' definition 'chainid'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/pdbio.h:104:43: note: Function 'write_pdbfile_indexed' argument 7 names different: declaration 'chain' definition 'chainid'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:261:43: note: Function 'write_pdbfile_indexed' argument 7 names different: declaration 'chain' definition 'chainid'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:384:35: style:inconclusive: Function 'write_pdbfile' argument 7 names different: declaration 'chain' definition 'chainid'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/pdbio.h:118:35: note: Function 'write_pdbfile' argument 7 names different: declaration 'chain' definition 'chainid'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:384:35: note: Function 'write_pdbfile' argument 7 names different: declaration 'chain' definition 'chainid'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:746:33: style:inconclusive: Function 'gmx_conect_done' argument 1 names different: declaration 'gc' definition 'conect'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/pdbio.h:187:33: note: Function 'gmx_conect_done' argument 1 names different: declaration 'gc' definition 'conect'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:746:33: note: Function 'gmx_conect_done' argument 1 names different: declaration 'gc' definition 'conect'.
gromacs-2021.3/src/gromacs/fileio/pdbio.cpp:441:6: style: Variable 'j' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/fileio/tests/fileioxdrserializer.cpp:119:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/fileio/tests/filemd5.cpp:94:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/fileio/tests/mrcdensitymap.cpp:94:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/fileio/readinp.cpp:173:10: style:inconclusive: Technically the member function 'inp_comp::operator()' can be const. [functionConst]
gromacs-2021.3/src/gromacs/fileio/tests/mrcdensitymapheader.cpp:67:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/fileio/readinp.cpp:347:29: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/readinp.cpp:347:44: style: The scope of the variable 'warn_buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/readinp.cpp:383:29: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/readinp.cpp:383:44: style: The scope of the variable 'warn_buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/readinp.cpp:419:29: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/readinp.cpp:419:44: style: The scope of the variable 'warn_buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/readinp.cpp:486:29: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/readinp.cpp:487:29: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/tests/mrcserializer.cpp:70:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/fileio/tests/readinp.cpp:71:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/fileio/tests/tngio.cpp:66:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/fileio/tests/xvgio.cpp:100:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:115:74: style:inconclusive: Function 'gmx_tng_open' argument 3 names different: declaration 'tng_data_p' definition 'gmx_tng'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:65:74: note: Function 'gmx_tng_open' argument 3 names different: declaration 'tng_data_p' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:115:74: note: Function 'gmx_tng_open' argument 3 names different: declaration 'tng_data_p' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:194:42: style:inconclusive: Function 'gmx_tng_close' argument 1 names different: declaration 'tng' definition 'gmx_tng'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:68:42: note: Function 'gmx_tng_close' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:194:42: note: Function 'gmx_tng_close' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:529:54: style:inconclusive: Function 'gmx_tng_prepare_md_writing' argument 1 names different: declaration 'tng' definition 'gmx_tng'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:85:54: note: Function 'gmx_tng_prepare_md_writing' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:529:54: note: Function 'gmx_tng_prepare_md_writing' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:732:61: style:inconclusive: Function 'gmx_tng_set_compression_precision' argument 1 names different: declaration 'tng' definition 'gmx_tng'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:91:61: note: Function 'gmx_tng_set_compression_precision' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:732:61: note: Function 'gmx_tng_set_compression_precision' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:742:60: style:inconclusive: Function 'gmx_tng_prepare_low_prec_writing' argument 1 names different: declaration 'tng' definition 'gmx_tng'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:100:60: note: Function 'gmx_tng_prepare_low_prec_writing' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:742:60: note: Function 'gmx_tng_prepare_low_prec_writing' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:758:42: style:inconclusive: Function 'gmx_fwrite_tng' argument 1 names different: declaration 'tng' definition 'gmx_tng'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:117:42: note: Function 'gmx_fwrite_tng' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:758:42: note: Function 'gmx_fwrite_tng' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:922:38: style:inconclusive: Function 'fflush_tng' argument 1 names different: declaration 'tng' definition 'gmx_tng'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:133:38: note: Function 'fflush_tng' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:922:38: note: Function 'fflush_tng' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:935:60: style:inconclusive: Function 'gmx_tng_get_time_of_final_frame' argument 1 names different: declaration 'tng' definition 'gmx_tng'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:140:60: note: Function 'gmx_tng_get_time_of_final_frame' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:935:60: note: Function 'gmx_tng_get_time_of_final_frame' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:1078:55: style:inconclusive: Function 'gmx_write_tng_from_trxframe' argument 1 names different: declaration 'output' definition 'gmx_tng_output'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:162:55: note: Function 'gmx_write_tng_from_trxframe' argument 1 names different: declaration 'output' definition 'gmx_tng_output'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:1078:55: note: Function 'gmx_write_tng_from_trxframe' argument 1 names different: declaration 'output' definition 'gmx_tng_output'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:1203:55: style:inconclusive: Function 'gmx_tng_setup_atom_subgroup' argument 1 names different: declaration 'tng' definition 'gmx_tng'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:167:55: note: Function 'gmx_tng_setup_atom_subgroup' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:1203:55: note: Function 'gmx_tng_setup_atom_subgroup' argument 1 names different: declaration 'tng' definition 'gmx_tng'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:1296:55: style:inconclusive: Function 'gmx_read_next_tng_frame' argument 1 names different: declaration 'input' definition 'gmx_tng_input'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:170:55: note: Function 'gmx_read_next_tng_frame' argument 1 names different: declaration 'input' definition 'gmx_tng_input'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:1296:55: note: Function 'gmx_read_next_tng_frame' argument 1 names different: declaration 'input' definition 'gmx_tng_input'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:1471:57: style:inconclusive: Function 'gmx_print_tng_molecule_system' argument 1 names different: declaration 'input' definition 'gmx_tng_input'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:176:57: note: Function 'gmx_print_tng_molecule_system' argument 1 names different: declaration 'input' definition 'gmx_tng_input'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:1471:57: note: Function 'gmx_print_tng_molecule_system' argument 1 names different: declaration 'input' definition 'gmx_tng_input'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:1621:74: style:inconclusive: Function 'gmx_get_tng_data_block_types_of_next_frame' argument 1 names different: declaration 'input' definition 'gmx_tng_input'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:179:74: note: Function 'gmx_get_tng_data_block_types_of_next_frame' argument 1 names different: declaration 'input' definition 'gmx_tng_input'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:1621:74: note: Function 'gmx_get_tng_data_block_types_of_next_frame' argument 1 names different: declaration 'input' definition 'gmx_tng_input'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:1657:73: style:inconclusive: Function 'gmx_get_tng_data_next_frame_of_block_type' argument 1 names different: declaration 'input' definition 'gmx_tng_input'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/tngio.h:189:73: note: Function 'gmx_get_tng_data_next_frame_of_block_type' argument 1 names different: declaration 'input' definition 'gmx_tng_input'.
gromacs-2021.3/src/gromacs/fileio/tngio.cpp:1657:73: note: Function 'gmx_get_tng_data_next_frame_of_block_type' argument 1 names different: declaration 'input' definition 'gmx_tng_input'.
gromacs-2021.3/src/gromacs/fileio/trrio.cpp:349:67: style:inconclusive: Function 'gmx_trr_read_frame_data' argument 2 names different: declaration 'sh' definition 'header'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/trrio.h:108:74: note: Function 'gmx_trr_read_frame_data' argument 2 names different: declaration 'sh' definition 'header'.
gromacs-2021.3/src/gromacs/fileio/trrio.cpp:349:67: note: Function 'gmx_trr_read_frame_data' argument 2 names different: declaration 'sh' definition 'header'.
gromacs-2021.3/src/gromacs/fileio/vmdio.cpp:275:17: style: The scope of the variable 'err' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/warninp.cpp:81:49: style:inconclusive: Function 'set_warning_line' argument 2 names different: declaration 'fn' definition 's'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/warninp.h:60:49: note: Function 'set_warning_line' argument 2 names different: declaration 'fn' definition 's'.
gromacs-2021.3/src/gromacs/fileio/warninp.cpp:81:49: note: Function 'set_warning_line' argument 2 names different: declaration 'fn' definition 's'.
gromacs-2021.3/src/gromacs/fileio/writeps.cpp:136:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/trxio.cpp:485:55: style:inconclusive: Function 'write_tng_frame' argument 2 names different: declaration 'fr' definition 'frame'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/trxio.h:151:62: note: Function 'write_tng_frame' argument 2 names different: declaration 'fr' definition 'frame'.
gromacs-2021.3/src/gromacs/fileio/trxio.cpp:485:55: note: Function 'write_tng_frame' argument 2 names different: declaration 'fr' definition 'frame'.
gromacs-2021.3/src/gromacs/fileio/xtcio.cpp:78:32: style:inconclusive: Function 'open_xtc' argument 1 names different: declaration 'filename' definition 'fn'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/fileio/xtcio.h:59:39: note: Function 'open_xtc' argument 1 names different: declaration 'filename' definition 'fn'.
gromacs-2021.3/src/gromacs/fileio/xtcio.cpp:78:32: note: Function 'open_xtc' argument 1 names different: declaration 'filename' definition 'fn'.
gromacs-2021.3/src/external/clFFT/src/library/plan.cpp:638:12: style: The scope of the variable 'in_1d' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/plan.cpp:638:19: style: The scope of the variable 'in_x' can be reduced. [variableScope]
gromacs-2021.3/src/external/clFFT/src/library/plan.cpp:638:25: style: The scope of the variable 'count' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/anadih.cpp:191:11: style: The scope of the variable 'cur_bin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/anadih.cpp:478:14: style: The scope of the variable 'nbin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/anadih.cpp:760:15: style: The scope of the variable 'ind' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/binsearch.cpp:73:26: style:inconclusive: Function 'insertionSort' argument 1 names different: declaration 'ar' definition 'arr'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/binsearch.h:43:26: note: Function 'insertionSort' argument 1 names different: declaration 'ar' definition 'arr'.
gromacs-2021.3/src/gromacs/gmxana/binsearch.cpp:73:26: note: Function 'insertionSort' argument 1 names different: declaration 'ar' definition 'arr'.
gromacs-2021.3/src/gromacs/gmxana/binsearch.cpp:73:46: style:inconclusive: Function 'insertionSort' argument 3 names different: declaration 'start' definition 'startndx'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/binsearch.h:43:45: note: Function 'insertionSort' argument 3 names different: declaration 'start' definition 'startndx'.
gromacs-2021.3/src/gromacs/gmxana/binsearch.cpp:73:46: note: Function 'insertionSort' argument 3 names different: declaration 'start' definition 'startndx'.
gromacs-2021.3/src/gromacs/gmxana/binsearch.cpp:73:60: style:inconclusive: Function 'insertionSort' argument 4 names different: declaration 'end' definition 'endndx'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/binsearch.h:43:56: note: Function 'insertionSort' argument 4 names different: declaration 'end' definition 'endndx'.
gromacs-2021.3/src/gromacs/gmxana/binsearch.cpp:73:60: note: Function 'insertionSort' argument 4 names different: declaration 'end' definition 'endndx'.
gromacs-2021.3/src/gromacs/gmxana/binsearch.cpp:109:30: style:inconclusive: Function 'BinarySearch' argument 1 names different: declaration 'ar' definition 'array'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/binsearch.h:45:30: note: Function 'BinarySearch' argument 1 names different: declaration 'ar' definition 'array'.
gromacs-2021.3/src/gromacs/gmxana/binsearch.cpp:109:30: note: Function 'BinarySearch' argument 1 names different: declaration 'ar' definition 'array'.
gromacs-2021.3/src/gromacs/gmxana/binsearch.cpp:109:41: style:inconclusive: Function 'BinarySearch' argument 2 names different: declaration 'start' definition 'low'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/binsearch.h:45:38: note: Function 'BinarySearch' argument 2 names different: declaration 'start' definition 'low'.
gromacs-2021.3/src/gromacs/gmxana/binsearch.cpp:109:41: note: Function 'BinarySearch' argument 2 names different: declaration 'start' definition 'low'.
gromacs-2021.3/src/gromacs/gmxana/binsearch.cpp:109:50: style:inconclusive: Function 'BinarySearch' argument 3 names different: declaration 'end' definition 'high'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/binsearch.h:45:49: note: Function 'BinarySearch' argument 3 names different: declaration 'end' definition 'high'.
gromacs-2021.3/src/gromacs/gmxana/binsearch.cpp:109:50: note: Function 'BinarySearch' argument 3 names different: declaration 'end' definition 'high'.
gromacs-2021.3/src/gromacs/gmxana/cmat.cpp:151:24: style:inconclusive: Function 'mat_energy' argument 1 names different: declaration 'mat' definition 'm'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/cmat.h:84:31: note: Function 'mat_energy' argument 1 names different: declaration 'mat' definition 'm'.
gromacs-2021.3/src/gromacs/gmxana/cmat.cpp:151:24: note: Function 'mat_energy' argument 1 names different: declaration 'mat' definition 'm'.
gromacs-2021.3/src/gromacs/gmxana/cmat.cpp:240:47: style:inconclusive: Function 'rmsd_distribution' argument 2 names different: declaration 'm' definition 'rms'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/cmat.h:90:54: note: Function 'rmsd_distribution' argument 2 names different: declaration 'm' definition 'rms'.
gromacs-2021.3/src/gromacs/gmxana/cmat.cpp:240:47: note: Function 'rmsd_distribution' argument 2 names different: declaration 'm' definition 'rms'.
gromacs-2021.3/src/gromacs/gmxana/dens_filter.cpp:50:42: style:inconclusive: Function 'convolution' argument 2 names different: declaration 'in' definition 'x'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/dens_filter.h:42:49: note: Function 'convolution' argument 2 names different: declaration 'in' definition 'x'.
gromacs-2021.3/src/gromacs/gmxana/dens_filter.cpp:50:42: note: Function 'convolution' argument 2 names different: declaration 'in' definition 'x'.
gromacs-2021.3/src/gromacs/gmxana/dens_filter.cpp:93:35: style:inconclusive: Function 'periodic_convolution' argument 1 names different: declaration 'dsize' definition 'datasize'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/dens_filter.h:43:42: note: Function 'periodic_convolution' argument 1 names different: declaration 'dsize' definition 'datasize'.
gromacs-2021.3/src/gromacs/gmxana/dens_filter.cpp:93:35: note: Function 'periodic_convolution' argument 1 names different: declaration 'dsize' definition 'datasize'.
gromacs-2021.3/src/gromacs/gmxana/dens_filter.cpp:93:51: style:inconclusive: Function 'periodic_convolution' argument 2 names different: declaration 'in' definition 'x'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/dens_filter.h:43:55: note: Function 'periodic_convolution' argument 2 names different: declaration 'in' definition 'x'.
gromacs-2021.3/src/gromacs/gmxana/dens_filter.cpp:93:51: note: Function 'periodic_convolution' argument 2 names different: declaration 'in' definition 'x'.
gromacs-2021.3/src/gromacs/gmxana/dens_filter.cpp:93:58: style:inconclusive: Function 'periodic_convolution' argument 3 names different: declaration 'ksize' definition 'kernelsize'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/dens_filter.h:43:63: note: Function 'periodic_convolution' argument 3 names different: declaration 'ksize' definition 'kernelsize'.
gromacs-2021.3/src/gromacs/gmxana/dens_filter.cpp:93:58: note: Function 'periodic_convolution' argument 3 names different: declaration 'ksize' definition 'kernelsize'.
gromacs-2021.3/src/gromacs/gmxana/dens_filter.cpp:131:33: style:inconclusive: Function 'gausskernel' argument 2 names different: declaration 'size' definition 'n'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/dens_filter.h:44:44: note: Function 'gausskernel' argument 2 names different: declaration 'size' definition 'n'.
gromacs-2021.3/src/gromacs/gmxana/dens_filter.cpp:131:33: note: Function 'gausskernel' argument 2 names different: declaration 'size' definition 'n'.
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:721:14: warning:inconclusive: Possible null pointer dereference: yy [nullPointer]
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:717:19: note: Assignment 'yy=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:721:14: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:724:13: warning:inconclusive: Possible null pointer dereference: yy [nullPointer]
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:717:19: note: Assignment 'yy=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:724:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:228:10: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:296:10: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:377:10: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:378:10: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:506:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:506:19: style: The scope of the variable 'is' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:507:9: style: The scope of the variable 'cur' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:527:24: style: The scope of the variable 'ptr1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:855:46: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:338:10: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/xvgr.cpp:339:10: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/fitahx.cpp:51:15: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/fitahx.cpp:67:12: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/dlist.cpp:200:70: style: Condition 'atm.Cn[1]!=-1' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxana/dlist.cpp:63:15: style: The scope of the variable 'thisres' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/dlist.cpp:442:12: style: The scope of the variable 'nn' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:453:38: portability:inconclusive: Casting from float * to char * is not portable due to different binary data representations on different platforms. [invalidPointerCast]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:800:38: portability:inconclusive: Casting from float * to char * is not portable due to different binary data representations on different platforms. [invalidPointerCast]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:177:54: style: The scope of the variable 'tmp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:344:32: style: The scope of the variable 'num' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:411:40: style: The scope of the variable 'mindiff' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:411:55: style: The scope of the variable 'diff' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:412:18: style: The scope of the variable 'lint1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:412:25: style: The scope of the variable 'lint2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:412:32: style: The scope of the variable 'lint3' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:412:39: style: The scope of the variable 'oldlint1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:412:49: style: The scope of the variable 'oldlint2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:412:59: style: The scope of the variable 'oldlint3' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:413:18: style: The scope of the variable 'minidx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:413:26: style: The scope of the variable 'maxidx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:414:67: style: The scope of the variable 'luip' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:415:18: style: The scope of the variable 'flag' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:416:37: style: The scope of the variable 'larger' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:416:48: style: The scope of the variable 'is_small' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:416:75: style: The scope of the variable 'prevrun' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:417:23: style: The scope of the variable 'lf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:423:18: style: The scope of the variable 'inv_precision' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:424:18: style: The scope of the variable 'errval' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:425:18: style: The scope of the variable 'rc' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:1103:15: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:1139:15: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:1178:15: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:1222:15: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:1269:15: style: The scope of the variable 'ret' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:1338:15: style: The scope of the variable 'fr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:1417:15: style: The scope of the variable 't' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/libxdrf.cpp:1418:15: style: The scope of the variable 'dt' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_angle.cpp:389:17: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/gromacs/gmxana/gmx_angle.cpp:360:17: note: First condition
gromacs-2021.3/src/gromacs/gmxana/gmx_angle.cpp:389:17: note: Second condition
gromacs-2021.3/src/gromacs/gmxana/gmx_angle.cpp:66:28: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_angle.cpp:66:31: style: The scope of the variable 'l' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_angle.cpp:173:19: style: The scope of the variable 'mode' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_angle.cpp:414:18: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_angle.cpp:175:19: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_angle.cpp:414:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_angle.cpp:419:22: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_angle.cpp:175:22: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_angle.cpp:419:22: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_awh.cpp:305:5: performance: Variable 'baseFilename_' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/src/gromacs/gmxana/gmx_awh.cpp:314:63: style:inconclusive: Function 'initializeAwhOutputFile' argument 1 names different: declaration 'subBlockStart' definition 'subblockStart'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/gmx_awh.cpp:123:55: note: Function 'initializeAwhOutputFile' argument 1 names different: declaration 'subBlockStart' definition 'subblockStart'.
gromacs-2021.3/src/gromacs/gmxana/gmx_awh.cpp:314:63: note: Function 'initializeAwhOutputFile' argument 1 names different: declaration 'subBlockStart' definition 'subblockStart'.
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:470:10: style: The scope of the variable 'g' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:537:17: style: The scope of the variable 'g' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:537:20: style: The scope of the variable 'h' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:1049:20: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:522:17: style: Local variable 'g' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:470:10: note: Shadowed declaration
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:522:17: note: Shadow variable
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:537:17: style: Local variable 'g' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:470:10: note: Shadowed declaration
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:537:17: note: Shadow variable
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:1444:18: style: Local variable 'idum' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:1049:23: note: Shadowed declaration
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:1444:18: note: Shadow variable
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:1445:18: style: Local variable 'rdum' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:1050:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/fileio/tpxio.cpp:1445:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_bundle.cpp:94:19: style: The scope of the variable 'div' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bundle.cpp:157:56: style: Parameter 'fr' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:220:79: warning:inconclusive: Possible null pointer dereference: sy [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:652:69: note: Calling function 'write_xvgr_graphs', 11th argument 'nullptr' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:220:79: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:1425:18: warning:inconclusive: Possible null pointer dereference: iout [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:1414:16: note: Assignment 'iout=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:1425:18: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:498:18: style: The scope of the variable 'nat' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:498:26: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:498:35: style: The scope of the variable 'vec' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:498:40: style: The scope of the variable 'nfr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:498:58: style: The scope of the variable 'snew_size' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:498:69: style: The scope of the variable 'frame' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:501:32: style: The scope of the variable 'imin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:501:38: style: The scope of the variable 'imax' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:502:18: style: The scope of the variable 'pmin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:502:25: style: The scope of the variable 'pmax' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:503:18: style: The scope of the variable 'all_at' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:507:46: style: The scope of the variable 'c' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:508:18: style: The scope of the variable 'ylabel' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:680:18: style: The scope of the variable 'out' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:865:24: style: The scope of the variable 'v' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:915:21: style: The scope of the variable 'v' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:1083:29: style: The scope of the variable 'd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:674:18: style: Local variable 'atoms' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:480:45: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:674:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:675:18: style: Local variable 'x' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:505:26: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:675:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:677:18: style: Local variable 'box' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:504:18: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:677:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:680:18: style: Local variable 'out' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:499:18: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:680:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:324:39: style: Parameter 'eignr1' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:426:45: style: Parameter 'eignr2' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:429:45: style: Parameter 'outvec' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:490:45: style: Parameter 'eignr' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:493:45: style: Parameter 'outvec' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:859:48: style: Parameter 'eignr' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_anaeig.cpp:907:42: style: Parameter 'eignr' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1725:9: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1670:9: note: First condition
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1725:9: note: Second condition
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:282:11: style: The scope of the variable 'xi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:644:25: style: The scope of the variable 'maxval' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:806:26: style: The scope of the variable 'ci' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1011:29: style: The scope of the variable 'nstr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1011:58: style: The scope of the variable 'midstr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1429:34: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1430:13: style: The scope of the variable 'nrms' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1434:24: style: The scope of the variable 'usextps' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1434:34: style: The scope of the variable 'x1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1435:17: style: The scope of the variable 'fn' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1447:22: style: The scope of the variable 'd1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1447:28: style: The scope of the variable 'd2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:1448:27: style: The scope of the variable 'buf1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_cluster.cpp:985:54: style: Parameter 'frameindices' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_clustsize.cpp:381:30: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_clustsize.cpp:106:15: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_clustsize.cpp:381:30: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_confrms.cpp:527:17: style: The scope of the variable 'name1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_confrms.cpp:527:25: style: The scope of the variable 'name2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_confrms.cpp:534:37: style: The scope of the variable 'fit_x' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_chi.cpp:517:18: warning: fscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxana/gmx_chi.cpp:503:17: style: The scope of the variable 'leg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_chi.cpp:1418:12: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_chi.cpp:1418:17: style: The scope of the variable 'chi_lookup' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:340:13: warning:inconclusive: Possible null pointer dereference: refr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:380:25: note: Assignment 'xshfr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:639:54: note: Calling function 'calc_mjdsp', 6th argument 'xshfr' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:340:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:477:28: warning:inconclusive: Possible null pointer dereference: mjdsp [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:405:19: note: Assignment 'mjdsp=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:477:28: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:478:28: warning:inconclusive: Possible null pointer dereference: mu [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:402:19: note: Assignment 'mu=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:478:28: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:479:28: warning:inconclusive: Possible null pointer dereference: mtrans [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:411:20: note: Assignment 'mtrans=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:479:28: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:480:17: warning:inconclusive: Possible null pointer dereference: dsp2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:406:19: note: Assignment 'dsp2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:480:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:481:17: warning:inconclusive: Possible null pointer dereference: xshfr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:380:25: note: Assignment 'xshfr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:481:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:491:9: warning:inconclusive: Possible null pointer dereference: time [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:384:25: note: Assignment 'time=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:491:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:493:13: warning:inconclusive: Possible null pointer dereference: time [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:384:25: note: Assignment 'time=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:493:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:497:13: warning:inconclusive: Possible null pointer dereference: time [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:384:25: note: Assignment 'time=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:497:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:522:69: warning:inconclusive: Possible null pointer dereference: mtrans [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:411:20: note: Assignment 'mtrans=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:522:69: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:528:22: warning:inconclusive: Possible null pointer dereference: mu [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:402:19: note: Assignment 'mu=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:528:22: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:610:27: warning:inconclusive: Possible null pointer dereference: mtrans [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:411:20: note: Assignment 'mtrans=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:610:27: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:611:22: warning:inconclusive: Possible null pointer dereference: mu [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:402:19: note: Assignment 'mu=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:611:22: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:611:31: warning:inconclusive: Possible null pointer dereference: mtrans [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:411:20: note: Assignment 'mtrans=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:611:31: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:612:25: warning:inconclusive: Possible null pointer dereference: mu [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:402:19: note: Assignment 'mu=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:612:25: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:614:22: warning:inconclusive: Possible null pointer dereference: mtrans [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:411:20: note: Assignment 'mtrans=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:614:22: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:615:22: warning:inconclusive: Possible null pointer dereference: mu [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:402:19: note: Assignment 'mu=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:615:22: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:617:67: warning:inconclusive: Possible null pointer dereference: time [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:384:25: note: Assignment 'time=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:617:67: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:617:78: warning:inconclusive: Possible null pointer dereference: mtrans [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:411:20: note: Assignment 'mtrans=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:617:78: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:618:17: warning:inconclusive: Possible null pointer dereference: mtrans [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:411:20: note: Assignment 'mtrans=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:618:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:619:67: warning:inconclusive: Possible null pointer dereference: time [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:384:25: note: Assignment 'time=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:619:67: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:619:78: warning:inconclusive: Possible null pointer dereference: mu [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:402:19: note: Assignment 'mu=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:619:78: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:620:17: warning:inconclusive: Possible null pointer dereference: mu [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:402:19: note: Assignment 'mu=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:620:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:743:57: warning:inconclusive: Possible null pointer dereference: time [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:384:25: note: Assignment 'time=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:743:57: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:744:55: warning:inconclusive: Possible null pointer dereference: time [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:384:25: note: Assignment 'time=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:744:55: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:751:28: warning:inconclusive: Possible null pointer dereference: time [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:384:25: note: Assignment 'time=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:751:28: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:752:28: warning:inconclusive: Possible null pointer dereference: dsp2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:406:19: note: Assignment 'dsp2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:752:28: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:103:20: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:103:23: style: The scope of the variable 'l' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:203:17: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:203:20: style: The scope of the variable 'l' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_current.cpp:284:10: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_density.cpp:118:13: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxana/gmx_density.cpp:191:18: style: The scope of the variable 'invvol' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_density.cpp:354:18: style: The scope of the variable 'invvol' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_density.cpp:712:17: style: The scope of the variable 'nr_electrons' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_densmap.cpp:139:23: style: The scope of the variable 'label' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:145:13: warning: Either the condition 'Densslice==nullptr' is redundant or there is possible null pointer dereference: Densslice. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:207:23: note: Assuming that condition 'Densslice==nullptr' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:145:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:399:14: warning:inconclusive: Possible null pointer dereference: int1 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:391:29: note: Assignment 'int1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:399:14: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:400:14: warning:inconclusive: Possible null pointer dereference: int2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:392:29: note: Assignment 'int2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:400:14: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:403:18: warning:inconclusive: Possible null pointer dereference: int1 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:391:29: note: Assignment 'int1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:403:18: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:404:18: warning:inconclusive: Possible null pointer dereference: int2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:392:29: note: Assignment 'int2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:404:18: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:405:25: warning:inconclusive: Possible null pointer dereference: int1 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:391:29: note: Assignment 'int1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:405:25: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:406:25: warning:inconclusive: Possible null pointer dereference: int2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:392:29: note: Assignment 'int2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:406:25: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:453:21: warning:inconclusive: Possible null pointer dereference: int1 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:391:29: note: Assignment 'int1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:453:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:454:21: warning:inconclusive: Possible null pointer dereference: int1 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:391:29: note: Assignment 'int1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:454:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:455:21: warning:inconclusive: Possible null pointer dereference: int2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:392:29: note: Assignment 'int2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:455:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:456:21: warning:inconclusive: Possible null pointer dereference: int2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:392:29: note: Assignment 'int2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:456:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:539:25: warning:inconclusive: Possible null pointer dereference: fit1 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:387:26: note: Assignment 'fit1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:539:25: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:540:25: warning:inconclusive: Possible null pointer dereference: fit2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:387:43: note: Assignment 'fit2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:540:25: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:545:21: warning:inconclusive: Possible null pointer dereference: int1 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:391:29: note: Assignment 'int1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:545:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:545:53: warning:inconclusive: Possible null pointer dereference: fit1 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:387:26: note: Assignment 'fit1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:545:53: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:546:21: warning:inconclusive: Possible null pointer dereference: int1 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:391:29: note: Assignment 'int1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:546:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:546:53: warning:inconclusive: Possible null pointer dereference: fit1 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:387:26: note: Assignment 'fit1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:546:53: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:549:21: warning:inconclusive: Possible null pointer dereference: int2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:392:29: note: Assignment 'int2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:549:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:549:53: warning:inconclusive: Possible null pointer dereference: fit2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:387:43: note: Assignment 'fit2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:549:53: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:550:21: warning:inconclusive: Possible null pointer dereference: int2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:392:29: note: Assignment 'int2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:550:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:550:53: warning:inconclusive: Possible null pointer dereference: fit2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:387:43: note: Assignment 'fit2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:550:53: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:377:19: style: The scope of the variable 'xvg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:378:19: style: The scope of the variable 'zDensavg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:379:25: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:381:19: style: The scope of the variable 'ndx1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:381:25: style: The scope of the variable 'ndx2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:381:32: style: The scope of the variable 'zperm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_densorder.cpp:384:19: style: The scope of the variable 'sigma1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dielectric.cpp:78:50: warning: Either the condition 'nbegin==0' is redundant or the array 'x[0]' is accessed at index -1, which is out of bounds. [negativeIndex]
gromacs-2021.3/src/gromacs/gmxana/gmx_dielectric.cpp:72:35: note: Assuming that condition 'nbegin==0' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_dielectric.cpp:78:50: note: Negative array index
gromacs-2021.3/src/gromacs/gmxana/gmx_dielectric.cpp:92:22: style: The scope of the variable 'i0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dielectric.cpp:92:26: style: The scope of the variable 'i1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_disre.cpp:163:32: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_disre.cpp:541:59: style: The scope of the variable 'label' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_disre.cpp:719:23: style: The scope of the variable 'leg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_disre.cpp:682:21: style: Local variable 'ntop' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_disre.cpp:87:18: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_disre.cpp:682:21: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_disre.cpp:776:20: style: Local variable 'top' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_disre.cpp:86:18: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_disre.cpp:776:20: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:233:9: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:290:9: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:278:12: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:347:11: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:347:14: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:349:11: style: The scope of the variable 'fp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:373:11: style: The scope of the variable 'ss_count' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:507:23: style: The scope of the variable 'tapein' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:507:32: style: The scope of the variable 'tapeout' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:508:28: style: The scope of the variable 'acc' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:510:23: style: The scope of the variable 'leg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:385:13: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxana/gmx_do_dssp.cpp:417:15: style: Consider using std::fill algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:870:18: warning:inconclusive: Possible null pointer dereference: muall [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:803:35: note: Assignment 'muall=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:870:18: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:877:22: warning:inconclusive: Possible null pointer dereference: muall [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:803:35: note: Assignment 'muall=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:877:22: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:143:10: style: The scope of the variable 'cy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:288:12: style: The scope of the variable 'vol' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:421:14: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:423:14: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:452:12: style: The scope of the variable 'mtot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:452:18: style: The scope of the variable 'qtot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:453:25: style: The scope of the variable 'a0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:453:29: style: The scope of the variable 'a1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:774:17: style: The scope of the variable 'leg_cosaver' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:779:17: style: The scope of the variable 'leg_adip' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:782:20: style: The scope of the variable 'outdd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:793:20: style: The scope of the variable 'mode' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:798:41: style: The scope of the variable 'invtel' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:1455:21: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dipoles.cpp:1241:19: style: Variable 'M4[m]' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_dos.cpp:138:12: style: The scope of the variable 'fd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:87:22: style: Condition 't[0]>0' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:83:14: note: Assuming that condition 't[0]>0' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:87:22: note: Condition 't[0]>0' is always true
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:364:21: warning:inconclusive: Possible null pointer dereference: tmp [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:323:18: note: Assignment 'tmp=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:364:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:366:23: warning:inconclusive: Possible null pointer dereference: tmp [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:323:18: note: Assignment 'tmp=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:366:23: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:367:39: warning:inconclusive: Possible null pointer dereference: tmp [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:323:18: note: Assignment 'tmp=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:367:39: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:934:26: warning:inconclusive: Possible null pointer dereference: buf2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:928:22: note: Assignment 'buf2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:934:26: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:935:13: warning:inconclusive: Possible null pointer dereference: buf2 [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:928:22: note: Assignment 'buf2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:935:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:943:26: warning:inconclusive: Possible null pointer dereference: buf [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:939:25: note: Assignment 'buf=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:943:26: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:167:10: style: The scope of the variable 'ok' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:322:12: style: The scope of the variable 'av' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:322:16: style: The scope of the variable 'var' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:432:16: style: The scope of the variable 'prev_bs' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:432:25: style: The scope of the variable 'nbs' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:722:11: style: The scope of the variable 'kt' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:724:11: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:763:28: style: The scope of the variable 'fluc' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:1154:23: style: The scope of the variable 'out' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:1155:26: style: The scope of the variable 'nlast' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:1155:45: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:1157:33: style: The scope of the variable 'cum1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:1157:39: style: The scope of the variable 'cum2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:1157:45: style: The scope of the variable 'cum3' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:1157:51: style: The scope of the variable 'cum4' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:207:16: style: Local variable 'chi2' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:166:13: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:207:16: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:207:23: style: Local variable 'a' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:166:19: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:207:23: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_analyze.cpp:808:44: style: Parameter 'val' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_dyecoupl.cpp:105:10: style: The scope of the variable 'allocblock' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dyecoupl.cpp:108:10: style: The scope of the variable 'natoms' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dyecoupl.cpp:115:17: style: The scope of the variable 'bin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dyecoupl.cpp:119:17: style: The scope of the variable 'rkleg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dyecoupl.cpp:120:17: style: The scope of the variable 'rhleg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dyecoupl.cpp:121:17: style: The scope of the variable 'khleg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dyecoupl.cpp:122:17: style: The scope of the variable 'ieleg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dyecoupl.cpp:126:9: style: The scope of the variable 'rkcount' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dyecoupl.cpp:126:22: style: The scope of the variable 'rblocksallocated' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_dyecoupl.cpp:126:44: style: The scope of the variable 'kblocksallocated' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_filter.cpp:110:53: style: The scope of the variable 'xn' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_gyrate.cpp:75:13: style: The scope of the variable 'ii' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_gyrate.cpp:125:23: style: The scope of the variable 'ii' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_gyrate.cpp:241:23: style: The scope of the variable 'legI' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:563:17: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:559:17: note: First condition
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:563:17: note: Second condition
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:581:17: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:577:17: note: First condition
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:581:17: note: Second condition
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:405:21: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:163:23: style: The scope of the variable 'out' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:174:39: style: The scope of the variable 'fn' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:178:31: style: The scope of the variable 'etot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:179:23: style: The scope of the variable 'beta' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:179:29: style: The scope of the variable 'expE' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:179:37: style: The scope of the variable 'e' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:179:41: style: The scope of the variable 'eaver' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:180:23: style: The scope of the variable 'label' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_enemat.cpp:183:23: style: The scope of the variable 'neref' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hydorder.cpp:325:30: warning:inconclusive: Possible null pointer dereference: index [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_hydorder.cpp:290:28: note: Assignment 'index=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_hydorder.cpp:325:30: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_hydorder.cpp:78:17: style: The scope of the variable 'ix' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_lie.cpp:175:41: style: The scope of the variable 'ct' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_lie.cpp:175:44: style: Variable 'ct' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_make_edi.cpp:529:12: style: The scope of the variable 'f0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_make_edi.cpp:529:21: style: The scope of the variable 'f1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_make_edi.cpp:531:12: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_mdmat.cpp:208:32: style: The scope of the variable 'fp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:339:23: error: Invalid std::sqrt() argument nr 1. The value is -1e+12 but the valid values are '0.0:'. [invalidFunctionArg]
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:274:14: note: Assignment 'rmax2=-1e12', assigned value is -1e+12.0
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:276:20: note: Assuming condition is false
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:339:23: note: Invalid argument
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:239:15: style: The scope of the variable 'jx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:244:11: style: The scope of the variable 'nmin_j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:244:19: style: The scope of the variable 'nmax_j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:644:20: style: The scope of the variable 'resnr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:747:17: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:634:14: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:373:18: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:634:14: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:864:14: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:747:17: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:864:14: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:672:48: style: Parameter 'resindex' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_msd.cpp:817:13: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/gromacs/gmxana/gmx_msd.cpp:808:13: note: First condition
gromacs-2021.3/src/gromacs/gmxana/gmx_msd.cpp:817:13: note: Second condition
gromacs-2021.3/src/gromacs/gmxana/gmx_msd.cpp:288:13: style: The scope of the variable 'ix' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_msd.cpp:345:13: style: The scope of the variable 'mol' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmeig.cpp:105:19: style: The scope of the variable 'ft' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmeig.cpp:195:12: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmeig.cpp:196:12: style: The scope of the variable 'row' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmeig.cpp:196:17: style: The scope of the variable 'col' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmeig.cpp:198:12: style: The scope of the variable 'katom' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmeig.cpp:510:31: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmeig.cpp:517:25: style: The scope of the variable 'qcleg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmens.cpp:181:18: warning:inconclusive: Possible null pointer dereference: iout [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmens.cpp:171:16: note: Assignment 'iout=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_nmens.cpp:181:18: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:609:5: warning:inconclusive: Either the condition '!sc' is redundant or there is possible null pointer dereference: sc. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:806:9: note: Assuming that condition '!sc' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:809:26: note: Calling function 'sample_coll_init', 1st argument 'sc' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:609:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:610:5: warning:inconclusive: Either the condition '!sc' is redundant or there is possible null pointer dereference: sc. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:806:9: note: Assuming that condition '!sc' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:809:26: note: Calling function 'sample_coll_init', 1st argument 'sc' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:610:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:611:5: warning:inconclusive: Either the condition '!sc' is redundant or there is possible null pointer dereference: sc. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:806:9: note: Assuming that condition '!sc' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:809:26: note: Calling function 'sample_coll_init', 1st argument 'sc' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:611:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:613:5: warning:inconclusive: Either the condition '!sc' is redundant or there is possible null pointer dereference: sc. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:806:9: note: Assuming that condition '!sc' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:809:26: note: Calling function 'sample_coll_init', 1st argument 'sc' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:613:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:614:5: warning:inconclusive: Either the condition '!sc' is redundant or there is possible null pointer dereference: sc. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:806:9: note: Assuming that condition '!sc' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:809:26: note: Calling function 'sample_coll_init', 1st argument 'sc' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:614:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:615:5: warning:inconclusive: Either the condition '!sc' is redundant or there is possible null pointer dereference: sc. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:806:9: note: Assuming that condition '!sc' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:809:26: note: Calling function 'sample_coll_init', 1st argument 'sc' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:615:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:616:5: warning:inconclusive: Either the condition '!sc' is redundant or there is possible null pointer dereference: sc. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:806:9: note: Assuming that condition '!sc' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:809:26: note: Calling function 'sample_coll_init', 1st argument 'sc' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:616:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:618:5: warning:inconclusive: Either the condition '!sc' is redundant or there is possible null pointer dereference: sc. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:806:9: note: Assuming that condition '!sc' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:809:26: note: Calling function 'sample_coll_init', 1st argument 'sc' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:618:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:619:5: warning:inconclusive: Either the condition '!sc' is redundant or there is possible null pointer dereference: sc. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:806:9: note: Assuming that condition '!sc' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:809:26: note: Calling function 'sample_coll_init', 1st argument 'sc' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:619:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:745:16: warning: Either the condition '!sc' is redundant or there is possible null pointer dereference: sc. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:806:9: note: Assuming that condition '!sc' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:815:31: note: Calling function 'sample_coll_insert_sample', 1st argument 'sc' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:745:16: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:746:9: warning: Either the condition '!sc' is redundant or there is possible null pointer dereference: sc. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:806:9: note: Assuming that condition '!sc' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:815:31: note: Calling function 'sample_coll_insert_sample', 1st argument 'sc' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:746:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1009:18: warning:inconclusive: Possible null pointer dereference: setnames [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:982:32: note: Assignment 'setnames=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1009:18: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:2465:29: warning:inconclusive: Possible null pointer dereference: ptr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:2459:13: note: ptr is decremented', new value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:2465:29: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3175:17: warning:inconclusive: Possible null pointer dereference: nhists [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3029:36: note: Assignment 'nhists=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3175:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3176:17: warning:inconclusive: Possible null pointer dereference: npts [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3030:36: note: Assignment 'npts=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3176:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3177:17: warning:inconclusive: Possible null pointer dereference: lambdas [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3031:36: note: Assignment 'lambdas=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3177:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3178:17: warning:inconclusive: Possible null pointer dereference: samples_rawdh [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3028:36: note: Assignment 'samples_rawdh=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3178:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3267:13: warning:inconclusive: Possible null pointer dereference: samples_rawdh [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3028:36: note: Assignment 'samples_rawdh=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3267:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3282:17: warning:inconclusive: Possible null pointer dereference: lambdas [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3031:36: note: Assignment 'lambdas=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3282:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:325:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:429:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1005:31: style: The scope of the variable 'buf2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1195:12: style: The scope of the variable 'delta_lambda' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1419:17: style: The scope of the variable 'new_start' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1419:28: style: The scope of the variable 'new_end' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1631:17: style: The scope of the variable 'DG1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1631:27: style: The scope of the variable 'dDG1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1992:12: style: The scope of the variable 'npee' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1992:18: style: The scope of the variable 'p' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1997:14: style: The scope of the variable 'dg_min' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1997:22: style: The scope of the variable 'dg_max' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:2154:18: style: The scope of the variable 's' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:2154:21: style: The scope of the variable 's2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:2613:35: style: The scope of the variable 'ptr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:2616:14: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:2794:19: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1314:33: style: Local variable 'end_t' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1293:29: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:1314:33: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3244:32: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3021:23: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:3244:32: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_bar.cpp:742:88: style: Parameter 'r' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1882:14: style: Expression is always true because 'else if' condition is opposite to previous condition at line 1793. [multiCondition]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1793:9: note: first condition
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1882:14: note: else if condition is opposite to first condition
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:156:9: warning:inconclusive: Possible null pointer dereference: newnm [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:139:25: note: Assignment 'newnm=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:156:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:158:35: warning:inconclusive: Possible null pointer dereference: newnm [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:139:25: note: Assignment 'newnm=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:158:35: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:333:12: style: The scope of the variable 'fac' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:446:27: style: The scope of the variable 'nee' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:447:17: style: The scope of the variable 'sum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:447:22: style: The scope of the variable 'sum2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:447:34: style: The scope of the variable 'see2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:448:17: style: The scope of the variable 'np' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:452:20: style: The scope of the variable 'sx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:452:24: style: The scope of the variable 'sy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:452:28: style: The scope of the variable 'sxx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:452:33: style: The scope of the variable 'sxy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:625:17: style: The scope of the variable 'sum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:722:15: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:723:16: style: The scope of the variable 'v' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:723:19: style: The scope of the variable 'h' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:723:69: style: The scope of the variable 'varet' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:894:11: style: The scope of the variable 'fp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:896:17: style: The scope of the variable 'Dt' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:896:21: style: The scope of the variable 'aver' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:896:27: style: The scope of the variable 'stddev' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:896:35: style: The scope of the variable 'errest' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:896:43: style: The scope of the variable 'delta_t' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:896:52: style: The scope of the variable 'totaldrift' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:900:17: style: The scope of the variable 'beta' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:900:27: style: The scope of the variable 'expE' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:900:33: style: The scope of the variable 'expEtot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:902:17: style: The scope of the variable 'nexact' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:902:25: style: The scope of the variable 'nnotexact' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:903:17: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:903:20: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:903:23: style: The scope of the variable 'nout' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:904:27: style: The scope of the variable 'eebuf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1232:18: style: The scope of the variable 'ravgleg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1355:17: style: The scope of the variable 'dhdl' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1356:17: style: The scope of the variable 'title' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1356:32: style: The scope of the variable 'label_x' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1356:49: style: The scope of the variable 'label_y' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1357:17: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1359:23: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1362:18: style: The scope of the variable 'setnr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1469:25: style: The scope of the variable 'x0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1729:24: style: The scope of the variable 'setnm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1750:45: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1753:23: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1091:25: style: Local variable 'leg' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:886:50: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_energy.cpp:1091:25: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_order.cpp:93:11: style: The scope of the variable 'ix' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_order.cpp:1009:12: style: The scope of the variable 'ngrps' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_order.cpp:1010:13: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_order.cpp:1011:17: style: The scope of the variable 'top' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_order.cpp:1014:14: style: The scope of the variable 'a' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_polystat.cpp:95:15: style: The scope of the variable 'd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_polystat.cpp:160:23: style: The scope of the variable 'sum_eed2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_polystat.cpp:160:47: style: The scope of the variable 'sum_gyro' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_polystat.cpp:163:29: style: The scope of the variable 'ymax' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_polystat.cpp:163:35: style: The scope of the variable 'ymin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_polystat.cpp:170:23: style: The scope of the variable 'legp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_polystat.cpp:170:29: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_potential.cpp:82:12: style: The scope of the variable 'sum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmtraj.cpp:140:16: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmtraj.cpp:148:16: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:199:13: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:204:20: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:197:9: warning:inconclusive: Possible null pointer dereference: equiv [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:191:13: note: Assignment 'equiv=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:197:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:99:11: style: The scope of the variable 'xi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:185:57: style: The scope of the variable 'lp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:186:20: style: The scope of the variable 'na' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:296:18: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:296:21: style: The scope of the variable 'anmil' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:296:28: style: The scope of the variable 'anmjl' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:296:41: style: The scope of the variable 'rnrj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:296:47: style: The scope of the variable 'gi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:296:60: style: The scope of the variable 'neq' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:297:15: style: The scope of the variable 'anmi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:297:22: style: The scope of the variable 'anmj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:476:15: style: The scope of the variable 'gi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:680:26: style: The scope of the variable 'noe_index' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsdist.cpp:503:65: style: Parameter 'noe_gr' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsf.cpp:131:56: warning:inconclusive: Possible null pointer dereference: U [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsf.cpp:534:36: note: Calling function 'average_residues', 2nd argument 'nullptr' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsf.cpp:131:56: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsf.cpp:253:17: style: The scope of the variable 'resind' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rmsf.cpp:272:17: style: The scope of the variable 'leg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rotacf.cpp:98:19: style: The scope of the variable 'mode' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_saltbr.cpp:176:9: warning:inconclusive: Possible null pointer dereference: time [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_saltbr.cpp:172:14: note: Assignment 'time=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_saltbr.cpp:176:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_saltbr.cpp:131:24: style: The scope of the variable 'out' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_saltbr.cpp:131:33: style: The scope of the variable 'fp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_saltbr.cpp:132:24: style: The scope of the variable 'title' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_saltbr.cpp:135:24: style: The scope of the variable 'fn' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_saltbr.cpp:136:24: style: The scope of the variable 'nset' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_saltbr.cpp:142:27: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_saltbr.cpp:142:30: style: The scope of the variable 'nnn' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_sham.cpp:75:16: style: The scope of the variable 'dd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_sham.cpp:452:61: style: The scope of the variable 'bi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_sorient.cpp:64:26: style: The scope of the variable 'iter' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_sorient.cpp:126:38: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_spatial.cpp:173:23: style: The scope of the variable 'v' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_spol.cpp:66:26: style: The scope of the variable 'iter' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_spol.cpp:119:21: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:145:18: warning:inconclusive: Possible null pointer dereference: tcafc [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:106:28: note: Assignment 'tcafc=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:145:18: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:173:21: warning:inconclusive: Possible null pointer dereference: tcafc [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:106:28: note: Assignment 'tcafc=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:173:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:203:17: warning:inconclusive: Possible null pointer dereference: tcafc [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:106:28: note: Assignment 'tcafc=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:203:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:204:52: warning:inconclusive: Possible null pointer dereference: tcafc [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:106:28: note: Assignment 'tcafc=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:204:52: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:207:13: warning:inconclusive: Possible null pointer dereference: tcafc [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:106:28: note: Assignment 'tcafc=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_tcaf.cpp:207:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:166:17: style: The scope of the variable 'whatlabel' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:180:21: style: The scope of the variable 'fitgraphlabel' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:203:21: style: The scope of the variable 'natoms_trx2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:204:18: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:206:35: style: The scope of the variable 'maxframe2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:218:18: style: The scope of the variable 'ncons' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:221:62: style: The scope of the variable 'axis2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:221:70: style: The scope of the variable 'del_xaxis' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:221:82: style: The scope of the variable 'del_yaxis' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:224:79: style: The scope of the variable 'delta_tot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:225:14: style: The scope of the variable 'delta_xsize' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:225:31: style: The scope of the variable 'del_lev' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:225:46: style: The scope of the variable 'mx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:225:50: style: The scope of the variable 'my' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:225:54: style: The scope of the variable 'abs_my' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:690:9: style: The scope of the variable 'teller2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:691:9: style: The scope of the variable 'frame2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:218:24: style: Variable 'ncons' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_rms.cpp:691:18: style: Variable 'frame2' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:206:9: warning:inconclusive: Possible null pointer dereference: time [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:187:14: note: Assignment 'time=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:206:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:207:23: warning:inconclusive: Possible null pointer dereference: sbox [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:188:14: note: Assignment 'sbox=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:207:23: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:212:14: warning:inconclusive: Possible null pointer dereference: sx [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:189:14: note: Assignment 'sx=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:212:14: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:215:36: warning:inconclusive: Possible null pointer dereference: sx [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:189:14: note: Assignment 'sx=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:215:36: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:227:11: warning:inconclusive: Possible null pointer dereference: time [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:187:14: note: Assignment 'time=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:227:11: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:146:58: style: The scope of the variable 'tickx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:146:66: style: The scope of the variable 'ticky' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_vanhove.cpp:147:38: style: The scope of the variable 'legend' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_velacc.cpp:104:16: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_velacc.cpp:104:19: style: The scope of the variable 'l' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_velacc.cpp:212:42: style: The scope of the variable 'counter_dim' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:106:22: style: The scope of the variable 'mtot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:163:18: style: The scope of the variable 'xav' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:191:21: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:363:15: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:383:15: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:442:11: style: The scope of the variable 'fp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:444:11: style: The scope of the variable 'maxi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:445:11: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:445:14: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:445:17: style: The scope of the variable 'onedim' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:557:16: style: The scope of the variable 'in' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:685:21: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:695:18: style: The scope of the variable 'box_leg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:1138:18: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:685:18: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:1138:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:1145:14: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:685:18: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:1145:14: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_traj.cpp:227:49: style: Parameter 'index' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_wheel.cpp:85:18: style: The scope of the variable 'sl' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wheel.cpp:90:15: style: The scope of the variable 'sign' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_xpm2ps.cpp:1171:12: style: The scope of the variable 'rmat1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_xpm2ps.cpp:1171:21: style: The scope of the variable 'rmat2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_xpm2ps.cpp:746:10: style: Variable 'major_fact' can be declared with const [constVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_xpm2ps.cpp:747:10: style: Variable 'minor_fact' can be declared with const [constVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_xpm2ps.cpp:799:22: style: Unused variable: psr [unusedVariable]
gromacs-2021.3/src/gromacs/gmxana/hxprops.cpp:112:13: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/hxprops.cpp:154:17: style: The scope of the variable 'a1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/hxprops.cpp:178:13: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/hxprops.cpp:178:17: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/hxprops.cpp:178:21: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/hxprops.cpp:178:25: style: The scope of the variable 'al' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/hxprops.cpp:203:16: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/hxprops.cpp:332:11: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/hxprops.cpp:472:13: style: The scope of the variable 'ao' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/nrama.cpp:78:17: style: The scope of the variable 'dd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/nrama.cpp:147:12: style: The scope of the variable 'found' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/nrama.cpp:199:17: style: The scope of the variable 'ft' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/nrama.cpp:199:21: style: The scope of the variable 'ftype' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/nrama.cpp:199:28: style: The scope of the variable 'nra' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/nrama.cpp:201:14: style: The scope of the variable 'dd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:124:13: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:160:10: warning:inconclusive: Possible null pointer dereference: gsans [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:156:25: note: Assignment 'gsans=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:160:10: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:162:5: warning:inconclusive: Possible null pointer dereference: gsans [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:156:25: note: Assignment 'gsans=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:162:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:219:5: warning:inconclusive: Possible null pointer dereference: pr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:203:47: note: Assignment 'pr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:219:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:230:5: warning:inconclusive: Possible null pointer dereference: pr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:203:47: note: Assignment 'pr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:230:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:232:10: warning:inconclusive: Possible null pointer dereference: pr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:203:47: note: Assignment 'pr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:232:10: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:353:17: warning:inconclusive: Possible null pointer dereference: pr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:203:47: note: Assignment 'pr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:353:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:363:31: warning:inconclusive: Possible null pointer dereference: pr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:203:47: note: Assignment 'pr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:363:31: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:366:10: warning:inconclusive: Possible null pointer dereference: pr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:203:47: note: Assignment 'pr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:366:10: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:367:21: warning:inconclusive: Possible null pointer dereference: pr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:203:47: note: Assignment 'pr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:367:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:369:9: warning:inconclusive: Possible null pointer dereference: pr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:203:47: note: Assignment 'pr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:369:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:384:5: warning:inconclusive: Possible null pointer dereference: sq [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:380:40: note: Assignment 'sq=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:384:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:385:10: warning:inconclusive: Possible null pointer dereference: sq [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:380:40: note: Assignment 'sq=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:385:10: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:386:10: warning:inconclusive: Possible null pointer dereference: sq [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:380:40: note: Assignment 'sq=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:386:10: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:387:21: warning:inconclusive: Possible null pointer dereference: sq [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:380:40: note: Assignment 'sq=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:387:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:389:9: warning:inconclusive: Possible null pointer dereference: sq [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:380:40: note: Assignment 'sq=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:389:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:105:44: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:213:30: style: The scope of the variable 'mc_max' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:293:42: style: Local variable 'dist' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:204:42: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/nsfactor.cpp:293:42: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/powerspect.cpp:59:28: style:inconclusive: Function 'powerspectavg' argument 1 names different: declaration 'interface' definition 'intftab'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/powerspect.h:52:35: note: Function 'powerspectavg' argument 1 names different: declaration 'interface' definition 'intftab'.
gromacs-2021.3/src/gromacs/gmxana/powerspect.cpp:59:28: note: Function 'powerspectavg' argument 1 names different: declaration 'interface' definition 'intftab'.
gromacs-2021.3/src/gromacs/gmxana/powerspect.cpp:59:41: style:inconclusive: Function 'powerspectavg' argument 2 names different: declaration 't' definition 'tsteps'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/powerspect.h:52:50: note: Function 'powerspectavg' argument 2 names different: declaration 't' definition 'tsteps'.
gromacs-2021.3/src/gromacs/gmxana/powerspect.cpp:59:41: note: Function 'powerspectavg' argument 2 names different: declaration 't' definition 'tsteps'.
gromacs-2021.3/src/gromacs/gmxana/powerspect.cpp:119:70: style:inconclusive: Function 'powerspectavg_intf' argument 4 names different: declaration 'xbins' definition 'xb'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/powerspect.h:57:65: note: Function 'powerspectavg_intf' argument 4 names different: declaration 'xbins' definition 'xb'.
gromacs-2021.3/src/gromacs/gmxana/powerspect.cpp:119:70: note: Function 'powerspectavg_intf' argument 4 names different: declaration 'xbins' definition 'xb'.
gromacs-2021.3/src/gromacs/gmxana/powerspect.cpp:119:78: style:inconclusive: Function 'powerspectavg_intf' argument 5 names different: declaration 'ybins' definition 'yb'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/powerspect.h:58:65: note: Function 'powerspectavg_intf' argument 5 names different: declaration 'ybins' definition 'yb'.
gromacs-2021.3/src/gromacs/gmxana/powerspect.cpp:119:78: note: Function 'powerspectavg_intf' argument 5 names different: declaration 'ybins' definition 'yb'.
gromacs-2021.3/src/gromacs/gmxana/powerspect.cpp:119:115: performance:inconclusive: Function parameter 'outfiles' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxana/princ.cpp:101:20: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/princ.cpp:212:13: style: The scope of the variable 'ii' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/princ.cpp:228:13: style: The scope of the variable 'ii' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/princ.cpp:267:13: style: The scope of the variable 'ii' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/princ.cpp:281:12: style: The scope of the variable 'ii' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/princ.cpp:292:15: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/tests/entropy.cpp:94:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxana/tests/gmx_make_ndx.cpp:75:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxana/tests/gmx_mindist.cpp:99:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxana/tests/gmx_msd.cpp:148:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxana/tests/gmx_traj.cpp:79:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxana/sfactor.cpp:298:13: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxana/sfactor.cpp:280:27: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/sfactor.cpp:381:16: style: The scope of the variable 'nrc' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/sfactor.cpp:382:16: style: The scope of the variable 'fndx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/sfactor.cpp:623:12: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/sfactor.cpp:624:23: style: The scope of the variable 'k2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/thermochemistry.cpp:158:94: style:inconclusive: Function 'calcQuasiHarmonicEntropy' argument 3 names different: declaration 'linear' definition 'bLinear'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/thermochemistry.h:147:94: note: Function 'calcQuasiHarmonicEntropy' argument 3 names different: declaration 'linear' definition 'bLinear'.
gromacs-2021.3/src/gromacs/gmxana/thermochemistry.cpp:158:94: note: Function 'calcQuasiHarmonicEntropy' argument 3 names different: declaration 'linear' definition 'bLinear'.
gromacs-2021.3/src/gromacs/gmxana/thermochemistry.cpp:185:90: style:inconclusive: Function 'calcSchlitterEntropy' argument 3 names different: declaration 'linear' definition 'bLinear'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxana/thermochemistry.h:132:90: note: Function 'calcSchlitterEntropy' argument 3 names different: declaration 'linear' definition 'bLinear'.
gromacs-2021.3/src/gromacs/gmxana/thermochemistry.cpp:185:90: note: Function 'calcSchlitterEntropy' argument 3 names different: declaration 'linear' definition 'bLinear'.
gromacs-2021.3/src/gromacs/gmxlib/nonbonded/nb_free_energy.cpp:202:62: style: Parameter 'xx' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxlib/nonbonded/nb_free_energy.cpp:67:26: style: struct member 'ScalarDataTypes::simdRealWidth' is never used. [unusedStructMember]
gromacs-2021.3/src/gromacs/gmxlib/nonbonded/nb_free_energy.cpp:68:26: style: struct member 'ScalarDataTypes::simdIntWidth' is never used. [unusedStructMember]
gromacs-2021.3/src/gromacs/gmxlib/nrnb.cpp:318:17: style: The scope of the variable 'mni' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxlib/nrnb.cpp:435:12: style: The scope of the variable 'wallclocktime' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxlib/nrnb.cpp:510:12: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxlib/nrnb.cpp:510:15: style: The scope of the variable 'perc' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxlib/nrnb.cpp:511:12: style: The scope of the variable 'dperc' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxlib/nrnb.cpp:584:16: style: The scope of the variable 'unb' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxlib/nrnb.cpp:587:20: style: The scope of the variable 'dperc' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxlib/nrnb.cpp:428:25: style:inconclusive: Function 'print_perf' argument 2 names different: declaration 'nodetime' definition 'time_per_thread'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxlib/nrnb.h:203:35: note: Function 'print_perf' argument 2 names different: declaration 'nodetime' definition 'time_per_thread'.
gromacs-2021.3/src/gromacs/gmxlib/nrnb.cpp:428:25: note: Function 'print_perf' argument 2 names different: declaration 'nodetime' definition 'time_per_thread'.
gromacs-2021.3/src/gromacs/gmxlib/nrnb.cpp:429:25: style:inconclusive: Function 'print_perf' argument 3 names different: declaration 'realtime' definition 'time_per_node'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxlib/nrnb.h:203:52: note: Function 'print_perf' argument 3 names different: declaration 'realtime' definition 'time_per_node'.
gromacs-2021.3/src/gromacs/gmxlib/nrnb.cpp:429:25: note: Function 'print_perf' argument 3 names different: declaration 'realtime' definition 'time_per_node'.
gromacs-2021.3/src/gromacs/gmxpreprocess/add_par.cpp:105:82: style:inconclusive: Function 'search_jtype' argument 3 names different: declaration 'bFirstRes' definition 'bNterm'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/add_par.h:64:82: note: Function 'search_jtype' argument 3 names different: declaration 'bFirstRes' definition 'bNterm'.
gromacs-2021.3/src/gromacs/gmxpreprocess/add_par.cpp:105:82: note: Function 'search_jtype' argument 3 names different: declaration 'bFirstRes' definition 'bNterm'.
gromacs-2021.3/src/gromacs/gmxpreprocess/convparm.cpp:447:51: performance:inconclusive: Function parameter 'forceparams' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:94:10: style: The scope of the variable 'ii' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:94:14: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:94:17: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:218:17: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:364:11: style: The scope of the variable 'edge' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:366:29: style: The scope of the variable 'nat' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:367:14: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:368:11: style: The scope of the variable 'rectedge' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:479:25: style: The scope of the variable 'resind' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:677:59: style: The scope of the variable 'itype' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:677:66: style: The scope of the variable 'ntype' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:678:42: style: The scope of the variable 'c6' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:678:46: style: The scope of the variable 'c12' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:928:15: style: Local variable 'index' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:683:23: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:928:15: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:1289:18: style: Local variable 'index' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:683:23: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:1289:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:1291:22: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:677:45: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:1291:22: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/editconf.cpp:368:11: style: Variable 'rectedge' can be declared with const [constVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:345:9: style: The scope of the variable 'start' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:389:10: style: The scope of the variable 'a' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:503:14: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:503:17: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:503:20: style: The scope of the variable 'j1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:503:24: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:503:27: style: The scope of the variable 'k1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:503:31: style: The scope of the variable 'l' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:503:34: style: The scope of the variable 'l1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:503:38: style: The scope of the variable 'e' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:504:14: style: The scope of the variable 'excl' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:584:53: style:inconclusive: Function 'gen_pad' argument 7 names different: declaration 'circ_bonds' definition 'cyclicBondsIndex'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.h:59:53: note: Function 'gen_pad' argument 7 names different: declaration 'circ_bonds' definition 'cyclicBondsIndex'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:584:53: note: Function 'gen_pad' argument 7 names different: declaration 'circ_bonds' definition 'cyclicBondsIndex'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:734:54: style: Local variable 'atoms' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:578:53: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:734:54: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:753:62: style: Local variable 'atoms' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:578:53: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:753:62: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:248:26: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_ad.cpp:332:24: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:311:53: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:355:53: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:581:10: style: The scope of the variable 'bNterm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:615:10: style: The scope of the variable 'bNterm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:1652:55: style:inconclusive: Function 'do_vsites' argument 7 names different: declaration 'dummy_type' definition 'vsite_type'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.h:66:55: note: Function 'do_vsites' argument 7 names different: declaration 'dummy_type' definition 'vsite_type'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:1652:55: note: Function 'do_vsites' argument 7 names different: declaration 'dummy_type' definition 'vsite_type'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:1655:55: style:inconclusive: Function 'do_vsites' argument 10 names different: declaration 'bVSiteAromatics' definition 'bVsiteAromatics'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.h:69:55: note: Function 'do_vsites' argument 10 names different: declaration 'bVSiteAromatics' definition 'bVsiteAromatics'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:1655:55: note: Function 'do_vsites' argument 10 names different: declaration 'bVSiteAromatics' definition 'bVsiteAromatics'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:2076:29: style: Local variable 'k' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:1659:13: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:2076:29: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:578:84: performance:inconclusive: Function parameter 'rtpFFDB' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:612:85: performance:inconclusive: Function parameter 'rtpFFDB' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:852:68: performance:inconclusive: Function parameter 'plist' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:855:68: performance:inconclusive: Function parameter 'vsitetop' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:941:68: performance:inconclusive: Function parameter 'vsitetop' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:1236:68: performance:inconclusive: Function parameter 'vsitetop' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:1393:68: performance:inconclusive: Function parameter 'vsitetop' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:1646:55: performance:inconclusive: Function parameter 'rtpFFDB' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:1965:26: style: Variable 'Hat_vsite_type' can be declared with const [constVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/gen_vsite.cpp:561:27: style: Parameter 'o2n' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:579:55: style:inconclusive: Function 'add_h' argument 11 names different: declaration 'bMissing' definition 'bAllowMissing'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.h:82:55: note: Function 'add_h' argument 11 names different: declaration 'bMissing' definition 'bAllowMissing'.
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:579:55: note: Function 'add_h' argument 11 names different: declaration 'bMissing' definition 'bAllowMissing'.
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:173:53: performance: Function parameter 'localAtomName' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:301:74: performance:inconclusive: Function parameter 'cyclicBondsIndex' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:349:68: performance:inconclusive: Function parameter 'cyclicBondsIndex' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:434:66: performance:inconclusive: Function parameter 'globalPatches' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:437:66: performance:inconclusive: Function parameter 'ntdb' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:438:66: performance:inconclusive: Function parameter 'ctdb' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:439:66: performance:inconclusive: Function parameter 'rN' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:440:66: performance:inconclusive: Function parameter 'rC' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:572:55: performance:inconclusive: Function parameter 'globalPatches' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:575:55: performance:inconclusive: Function parameter 'ntdb' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:576:55: performance:inconclusive: Function parameter 'ctdb' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:577:55: performance:inconclusive: Function parameter 'rN' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:578:55: performance:inconclusive: Function parameter 'rC' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genhydro.cpp:580:55: performance:inconclusive: Function parameter 'cyclicBondsIndex' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:227:20: style: Condition 'r<0' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:216:15: note: Assuming that condition 'r==0' is not redundant
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:227:20: note: Condition 'r<0' is always true
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:334:13: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:204:31: style: The scope of the variable 'starta' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:204:39: style: The scope of the variable 'startr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:204:47: style: The scope of the variable 'npi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:204:52: style: The scope of the variable 'nni' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:286:42: style: The scope of the variable 'temp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:483:23: style: The scope of the variable 'repl' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:485:23: style: The scope of the variable 'nw' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:485:27: style: The scope of the variable 'nsa' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:485:32: style: The scope of the variable 'nsalt' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:159:49: warning:inconclusive: Either the condition 'solventMoleculesForReplacement->empty()' is redundant or expression 'solventMoleculesForReplacement->back()' cause access out of bounds. [containerOutOfBounds]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:145:57: note: Assuming that condition 'solventMoleculesForReplacement->empty()' is not redundant
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:159:49: note: Access out of bounds
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:163:46: warning:inconclusive: Either the condition 'solventMoleculesForReplacement->empty()' is redundant or expression 'solventMoleculesForReplacement->back()' cause access out of bounds. [containerOutOfBounds]
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:145:57: note: Assuming that condition 'solventMoleculesForReplacement->empty()' is not redundant
gromacs-2021.3/src/gromacs/gmxpreprocess/genion.cpp:163:46: note: Access out of bounds
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:106:13: style: Condition 'ptr' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:756:14: style: Condition 'handle' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:243:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:551:15: style: The scope of the variable 'status' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:345:50: style:inconclusive: Function 'cpp_open_file' argument 2 names different: declaration 'handlep' definition 'handle'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.h:64:50: note: Function 'cpp_open_file' argument 2 names different: declaration 'handlep' definition 'handle'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:345:50: note: Function 'cpp_open_file' argument 2 names different: declaration 'handlep' definition 'handle'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:648:29: style: Local variable 'ptr' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:631:25: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:648:29: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:678:31: style: Parameter 'handlep' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:729:28: style: Parameter 'handlep' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:216:69: style: Parameter 'definesFromParent' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:217:69: style: Parameter 'includesFromParent' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:202:9: style: Consider using std::find_if algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:377:17: style: Consider using std::any_of algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:709:9: style: Consider using std::find_if algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:772:21: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_atomtype.cpp:290:78: style:inconclusive: Function 'renumberTypes' argument 3 names different: declaration 'wallAtomType' definition 'wall_atomtype'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_atomtype.h:217:88: note: Function 'renumberTypes' argument 3 names different: declaration 'wallAtomType' definition 'wall_atomtype'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_atomtype.cpp:290:78: note: Function 'renumberTypes' argument 3 names different: declaration 'wallAtomType' definition 'wall_atomtype'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_atomtype.cpp:291:78: style:inconclusive: Function 'renumberTypes' argument 4 names different: declaration 'verbose' definition 'bVerbose'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_atomtype.h:217:107: note: Function 'renumberTypes' argument 4 names different: declaration 'verbose' definition 'bVerbose'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_atomtype.cpp:291:78: note: Function 'renumberTypes' argument 4 names different: declaration 'verbose' definition 'bVerbose'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_atomtype.cpp:372:61: style:inconclusive: Function 'copyTot_atomtypes' argument 1 names different: declaration 'atypes' definition 'atomtypes'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_atomtype.h:224:41: note: Function 'copyTot_atomtypes' argument 1 names different: declaration 'atypes' definition 'atomtypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_atomtype.cpp:372:61: note: Function 'copyTot_atomtypes' argument 1 names different: declaration 'atypes' definition 'atomtypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_nextnb.cpp:177:21: style: The scope of the variable 'j_index' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_nextnb.cpp:178:25: style: The scope of the variable 'nrs' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_nextnb.cpp:178:30: style: The scope of the variable 'nr_of_sortables' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/gpp_nextnb.cpp:434:79: performance:inconclusive: Function parameter 'plist' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/h_db.cpp:91:10: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:275:14: style: The scope of the variable 'tat' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/h_db.cpp:148:13: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:340:10: style: The scope of the variable 'min_steps_warn' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:345:18: style: The scope of the variable 'bWater' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:345:26: style: The scope of the variable 'bWarn' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:1146:12: style: The scope of the variable 'p' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/h_db.cpp:74:47: style:inconclusive: Function 'print_ab' argument 2 names different: declaration 'ab' definition 'hack'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/h_db.h:64:47: note: Function 'print_ab' argument 2 names different: declaration 'ab' definition 'hack'.
gromacs-2021.3/src/gromacs/gmxpreprocess/h_db.cpp:74:47: note: Function 'print_ab' argument 2 names different: declaration 'ab' definition 'hack'.
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:1146:15: style: The scope of the variable 'q' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/h_db.cpp:85:57: style:inconclusive: Function 'read_ab' argument 3 names different: declaration 'ab' definition 'hack'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/h_db.h:52:57: note: Function 'read_ab' argument 3 names different: declaration 'ab' definition 'hack'.
gromacs-2021.3/src/gromacs/gmxpreprocess/h_db.cpp:85:57: note: Function 'read_ab' argument 3 names different: declaration 'ab' definition 'hack'.
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:1189:12: style: The scope of the variable 'offset' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:1277:16: style: The scope of the variable 'count_mol' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:1795:14: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:741:27: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:587:33: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:741:27: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:1977:21: style: Local variable 'fn' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:1905:17: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:1977:21: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:497:14: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:843:20: style: Consider using std::fill or std::generate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/grompp.cpp:1567:31: style: Consider using std::any_of, std::all_of, std::none_of, or std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/hizzie.cpp:174:75: style:inconclusive: Function 'set_histp' argument 5 names different: declaration 'distance' definition 'dist'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/hizzie.h:47:75: note: Function 'set_histp' argument 5 names different: declaration 'distance' definition 'dist'.
gromacs-2021.3/src/gromacs/gmxpreprocess/hizzie.cpp:174:75: note: Function 'set_histp' argument 5 names different: declaration 'distance' definition 'dist'.
gromacs-2021.3/src/gromacs/gmxpreprocess/hizzie.cpp:183:15: style: Local variable 'hbond' shadows outer function [shadowFunction]
gromacs-2021.3/src/gromacs/gmxpreprocess/hizzie.cpp:75:13: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/hizzie.cpp:183:15: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/nm2type.cpp:92:17: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/nm2type.cpp:207:22: style: The scope of the variable 'nb' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/nm2type.cpp:209:11: style: The scope of the variable 'aname_i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/nm2type.cpp:331:18: style: The scope of the variable 'atomnr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/nm2type.cpp:203:37: style:inconclusive: Function 'nm2type' argument 7 names different: declaration 'bond' definition 'bonds'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/nm2type.h:70:37: note: Function 'nm2type' argument 7 names different: declaration 'bond' definition 'bonds'.
gromacs-2021.3/src/gromacs/gmxpreprocess/nm2type.cpp:203:37: note: Function 'nm2type' argument 7 names different: declaration 'bond' definition 'bonds'.
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bNewRTP_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bInter_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bCysMan_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bLysMan_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bAspMan_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bGluMan_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bHisMan_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bGlnMan_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bArgMan_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bTerMan_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bUnA_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bHeavyH_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bSort_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bAllowMissing_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bRemoveH_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bDeuterate_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bVerbose_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bChargeGroups_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bCmap_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bRenumRes_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bRTPresname_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bIndexSet_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bOutputSet_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bWat_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::bITP_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::forcefield_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::ffdir_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::ffname_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1461:5: warning: Member variable 'pdb2gmx::watermodel_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2329:37: style: Condition '!tdblist.empty()' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2316:34: note: Assuming that condition 'tdblist.empty()' is not redundant
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2329:37: note: Condition '!tdblist.empty()' is always true
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2367:37: style: Condition '!tdblist.empty()' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2354:34: note: Assuming that condition 'tdblist.empty()' is not redundant
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2367:37: note: Condition '!tdblist.empty()' is always true
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:248:24: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:391:11: style: The scope of the variable 'resnm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:483:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:484:9: style: The scope of the variable 'nzero' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:485:9: style: The scope of the variable 'nnotone' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:582:16: style: The scope of the variable 'new_natom' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:582:27: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:974:9: style: The scope of the variable 'endWarnings' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1186:17: style: The scope of the variable 'old_this_chainid' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1188:17: style: The scope of the variable 'old_this_chainnum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1193:17: style: The scope of the variable 'prev_atomnum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1194:17: style: The scope of the variable 'prev_atomname' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1196:17: style: The scope of the variable 'prev_resname' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1198:17: style: The scope of the variable 'prev_resnum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1200:17: style: The scope of the variable 'prev_chainid' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1852:17: style: The scope of the variable 'prev_atomnum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1853:17: style: The scope of the variable 'prev_atomname' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1855:17: style: The scope of the variable 'prev_resname' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1857:17: style: The scope of the variable 'prev_resnum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1859:17: style: The scope of the variable 'prev_chainid' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1861:17: style: The scope of the variable 'prev_chainnumber' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1082:18: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:967:32: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1082:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2151:18: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2098:22: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2151:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2156:18: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2098:22: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2156:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2473:22: style: Local variable 'k' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2451:13: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2473:22: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2637:18: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2098:22: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2637:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2646:18: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2098:22: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:2646:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:129:55: performance:inconclusive: Function parameter 'rr' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:148:65: performance:inconclusive: Function parameter 'rr' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:162:65: performance:inconclusive: Function parameter 'rr' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:176:65: performance:inconclusive: Function parameter 'rr' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:190:65: performance:inconclusive: Function parameter 'rr' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:204:65: performance:inconclusive: Function parameter 'rr' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:218:65: performance:inconclusive: Function parameter 'rr' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:323:51: performance:inconclusive: Function parameter 'rr' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1303:65: performance:inconclusive: Function parameter 'rtpFFDB' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2gmx.cpp:1304:65: performance:inconclusive: Function parameter 'rr' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pgutil.cpp:63:10: style: The scope of the variable 'message_buffer' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:404:9: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:403:14: warning:inconclusive: Possible null pointer dereference: model [nullPointer]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:399:13: note: Assignment 'model=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:403:14: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:404:29: warning:inconclusive: Possible null pointer dereference: model [nullPointer]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:399:13: note: Assignment 'model=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:404:29: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:442:15: warning:inconclusive: Possible null pointer dereference: model [nullPointer]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:399:13: note: Assignment 'model=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:442:15: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:453:18: style: The scope of the variable 'prevresind' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:983:11: style: The scope of the variable 'key' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:984:11: style: The scope of the variable 'bRM' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:1512:43: style: The scope of the variable 'bts' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:971:64: performance:inconclusive: Function parameter 'rtpFFDB' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:1339:68: performance:inconclusive: Function parameter 'x' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:1496:53: performance:inconclusive: Function parameter 'ssbonds' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:1088:59: style: Parameter 'name' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:1016:60: error: Out of bounds access in expression 'usedPpResidues->back()' because 'usedPpResidues' is empty and 'back' may be non-zero. [containerOutOfBounds]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:1020:48: error: Out of bounds access in expression 'usedPpResidues->front()' because 'usedPpResidues' is empty and 'front' may be non-zero. [containerOutOfBounds]
gromacs-2021.3/src/gromacs/gmxpreprocess/pdb2top.cpp:1081:56: error: Out of bounds access in expression 'usedPpResidues->at(pos)' because 'usedPpResidues' is empty and 'at' may be non-zero. [containerOutOfBounds]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:202:10: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:353:20: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:1920:20: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:1921:17: style: The scope of the variable 'warn_buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:2835:23: style: The scope of the variable 'warn_buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:2946:36: style: The scope of the variable 'na_tot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:2947:40: style: The scope of the variable 'nrdf_uc' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3233:10: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3233:13: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3284:34: style: The scope of the variable 'gind' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3285:18: style: The scope of the variable 'swapg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3321:13: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3439:15: style: The scope of the variable 'nstcmin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3441:30: style: The scope of the variable 'bAnneal' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4089:17: style: The scope of the variable 'c6i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4089:27: style: The scope of the variable 'c12i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4221:37: style: The scope of the variable 'c' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4226:31: style: The scope of the variable 'warn_buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:2490:29: style: Local variable 'stream' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:1928:28: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:2490:29: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3466:14: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3440:15: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3466:14: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3780:18: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3440:15: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3780:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4250:20: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4221:31: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4250:20: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4283:13: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4221:31: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4283:13: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4411:14: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4221:31: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4411:14: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4428:27: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4221:31: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:4428:27: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:2076:27: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/readir.cpp:3284:29: style: Variable 'i' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/readpull.cpp:98:13: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/readpull.cpp:289:10: style: The scope of the variable 'nscan' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readrot.cpp:80:15: style: The scope of the variable 'rotg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readrot.cpp:228:10: style: The scope of the variable 'warn_buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readrot.cpp:316:18: style: The scope of the variable 'ig' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readrot.cpp:317:15: style: The scope of the variable 'rotg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/readrot.cpp:316:21: style: Variable 'ig' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/resall.cpp:92:17: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/resall.cpp:138:13: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/resall.cpp:173:17: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/resall.cpp:68:13: style: The scope of the variable 'in' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/resall.cpp:311:15: style: The scope of the variable 'nparam' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/resall.cpp:313:11: style: The scope of the variable 'bNextResidue' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/resall.cpp:313:25: style: The scope of the variable 'bError' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/resall.cpp:302:58: style:inconclusive: Function 'readResidueDatabase' argument 1 names different: declaration 'resdb' definition 'rrdb'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/resall.h:104:58: note: Function 'readResidueDatabase' argument 1 names different: declaration 'resdb' definition 'rrdb'.
gromacs-2021.3/src/gromacs/gmxpreprocess/resall.cpp:302:58: note: Function 'readResidueDatabase' argument 1 names different: declaration 'resdb' definition 'rrdb'.
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:711:79: warning: Either the condition 'atomsSolvent' is redundant or there is possible null pointer dereference: atomsSolvent. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:719:9: note: Assuming that condition 'atomsSolvent' is not redundant
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:711:79: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:712:13: warning: Either the condition 'atomsSolvent' is redundant or there is possible null pointer dereference: atomsSolvent. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:719:9: note: Assuming that condition 'atomsSolvent' is not redundant
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:712:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:733:17: style: The scope of the variable 'fpin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:733:24: style: The scope of the variable 'fpout' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:734:17: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:734:34: style: The scope of the variable 'buf2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:734:49: style: The scope of the variable 'temp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:736:17: style: The scope of the variable 'line' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:737:17: style: The scope of the variable 'bSystem' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:908:17: style: The scope of the variable 'conf_prot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:816:22: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:738:17: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/solvate.cpp:816:22: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/specbond.cpp:91:13: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/specbond.cpp:195:32: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/specbond.cpp:255:33: style: Local variable 'buf' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/specbond.cpp:195:32: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/specbond.cpp:255:33: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/specbond.cpp:264:33: style: Local variable 'buf' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/specbond.cpp:195:32: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/specbond.cpp:264:33: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/tests/editconf.cpp:104:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxpreprocess/tests/genconf.cpp:83:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxpreprocess/ter_db.cpp:330:40: style: Condition 'kwnr<ebtsNR' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxpreprocess/ter_db.cpp:278:22: note: Assuming that condition 'kwnr>=ebtsNR' is not redundant
gromacs-2021.3/src/gromacs/gmxpreprocess/ter_db.cpp:330:40: note: Condition 'kwnr<ebtsNR' is always true
gromacs-2021.3/src/gromacs/gmxpreprocess/ter_db.cpp:106:10: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/ter_db.cpp:289:25: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/ter_db.cpp:339:25: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/ter_db.cpp:353:17: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/tests/genion.cpp:105:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxpreprocess/tests/genrestr.cpp:76:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxpreprocess/tests/gpp_atomtype.cpp:77:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxpreprocess/tests/insert_molecules.cpp:76:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp:128:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxpreprocess/tests/readir.cpp:120:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxpreprocess/tests/solvate.cpp:79:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gmxpreprocess/tomorse.cpp:77:17: warning: fscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/topdirs.cpp:324:15: style: The scope of the variable 'D' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/topdirs.cpp:360:15: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:593:37: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:338:5: warning:inconclusive: Possible null pointer dereference: cppopts [nullPointer]
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:289:29: note: Assignment 'cppopts=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:338:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:1083:15: warning:inconclusive: Possible null pointer dereference: qm_arr [nullPointer]
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:1039:20: note: Assignment 'qm_arr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:1083:15: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:1278:26: style: The scope of the variable 'nat_mol' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:1279:21: style: The scope of the variable 'molb' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:969:53: style:inconclusive: Function 'do_top' argument 7 names different: declaration 'plist' definition 'interactions'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.h:74:53: note: Function 'do_top' argument 7 names different: declaration 'plist' definition 'interactions'.
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:969:53: note: Function 'do_top' argument 7 names different: declaration 'plist' definition 'interactions'.
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:973:53: style:inconclusive: Function 'do_top' argument 11 names different: declaration 'atype' definition 'atypes'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.h:78:53: note: Function 'do_top' argument 11 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:973:53: note: Function 'do_top' argument 11 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:1242:13: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:1208:9: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:1242:13: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:969:53: performance:inconclusive: Function parameter 'interactions' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:1281:34: style: Variable 'index_offset' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/topio.cpp:1355:26: style: Variable 'index_offset' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:831:25: style: Condition 'nn>nrfpA' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:820:16: note: Assuming that condition 'nn==nrfpA' is not redundant
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:831:25: note: Condition 'nn>nrfpA' is always true
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:979:25: style: Condition 'nn>nrfpA' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:968:16: note: Assuming that condition 'nn==nrfpA' is not redundant
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:979:25: note: Condition 'nn>nrfpA' is always true
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1245:28: style: Condition 'read_cmap>nrfpA' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1232:19: note: Assuming that condition 'read_cmap==nrfpA' is not redundant
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1245:28: note: Condition 'read_cmap>nrfpA' is always true
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:307:15: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:376:29: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:387:29: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:400:29: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:410:29: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:438:29: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:449:29: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:463:29: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:474:29: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1038:9: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1214:14: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1400:9: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1421:13: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1464:10: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2455:9: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2440:47: warning:inconclusive: Possible null pointer dereference: atc [nullPointer]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2363:22: note: Assignment 'atc=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2440:47: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2442:34: warning:inconclusive: Possible null pointer dereference: weight [nullPointer]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2364:22: note: Assignment 'weight=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2442:34: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:791:17: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:886:12: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1036:17: style: The scope of the variable 'bId' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1528:24: style: The scope of the variable 'ti' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1528:28: style: The scope of the variable 'tj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1528:32: style: The scope of the variable 'ntype' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1862:17: style: The scope of the variable 'asformat' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1866:17: style: The scope of the variable 'ccformat' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1868:17: style: The scope of the variable 'format' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:71:48: style:inconclusive: Function 'generate_nbparams' argument 2 names different: declaration 'funct' definition 'ftype'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:65:38: note: Function 'generate_nbparams' argument 2 names different: declaration 'funct' definition 'ftype'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:71:48: note: Function 'generate_nbparams' argument 2 names different: declaration 'funct' definition 'ftype'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:72:48: style:inconclusive: Function 'generate_nbparams' argument 3 names different: declaration 'plist' definition 'interactions'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:65:65: note: Function 'generate_nbparams' argument 3 names different: declaration 'plist' definition 'interactions'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:72:48: note: Function 'generate_nbparams' argument 3 names different: declaration 'plist' definition 'interactions'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:73:48: style:inconclusive: Function 'generate_nbparams' argument 4 names different: declaration 'atype' definition 'atypes'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:65:96: note: Function 'generate_nbparams' argument 4 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:73:48: note: Function 'generate_nbparams' argument 4 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:220:69: style:inconclusive: Function 'copy_nbparams' argument 3 names different: declaration 'plist' definition 'interactions'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:131:69: note: Function 'copy_nbparams' argument 3 names different: declaration 'plist' definition 'interactions'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:220:69: note: Function 'copy_nbparams' argument 3 names different: declaration 'plist' definition 'interactions'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:276:41: style:inconclusive: Function 'push_at' argument 3 names different: declaration 'bat' definition 'bondAtomType'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:69:41: note: Function 'push_at' argument 3 names different: declaration 'bat' definition 'bondAtomType'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:276:41: note: Function 'push_at' argument 3 names different: declaration 'bat' definition 'bondAtomType'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:776:48: style:inconclusive: Function 'push_bt' argument 5 names different: declaration 'bat' definition 'bondAtomType'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:80:48: note: Function 'push_bt' argument 5 names different: declaration 'bat' definition 'bondAtomType'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:776:48: note: Function 'push_bt' argument 5 names different: declaration 'bat' definition 'bondAtomType'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:858:58: style:inconclusive: Function 'push_dihedraltype' argument 3 names different: declaration 'bat' definition 'bondAtomType'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:86:58: note: Function 'push_dihedraltype' argument 3 names different: declaration 'bat' definition 'bondAtomType'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:858:58: note: Function 'push_dihedraltype' argument 3 names different: declaration 'bat' definition 'bondAtomType'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1024:69: style:inconclusive: Function 'push_nbt' argument 3 names different: declaration 'atype' definition 'atypes'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:98:69: note: Function 'push_nbt' argument 3 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1024:69: note: Function 'push_nbt' argument 3 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1024:83: style:inconclusive: Function 'push_nbt' argument 4 names different: declaration 'plines' definition 'pline'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:98:82: note: Function 'push_nbt' argument 4 names different: declaration 'plines' definition 'pline'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1024:83: note: Function 'push_nbt' argument 4 names different: declaration 'plines' definition 'pline'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1159:54: style:inconclusive: Function 'push_cmaptype' argument 4 names different: declaration 'at' definition 'atomtypes'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:93:54: note: Function 'push_cmaptype' argument 4 names different: declaration 'at' definition 'atomtypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1159:54: note: Function 'push_cmaptype' argument 4 names different: declaration 'at' definition 'atomtypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1160:54: style:inconclusive: Function 'push_cmaptype' argument 5 names different: declaration 'bat' definition 'bondAtomType'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:94:54: note: Function 'push_cmaptype' argument 5 names different: declaration 'bat' definition 'bondAtomType'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1160:54: note: Function 'push_cmaptype' argument 5 names different: declaration 'bat' definition 'bondAtomType'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1390:71: style:inconclusive: Function 'push_atom' argument 3 names different: declaration 'atype' definition 'atypes'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:100:78: note: Function 'push_atom' argument 3 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1390:71: note: Function 'push_atom' argument 3 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1851:50: style:inconclusive: Function 'push_bond' argument 5 names different: declaration 'atype' definition 'atypes'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:106:50: note: Function 'push_bond' argument 5 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1851:50: note: Function 'push_bond' argument 5 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2277:50: style:inconclusive: Function 'push_cmap' argument 5 names different: declaration 'atype' definition 'atypes'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.h:119:50: note: Function 'push_cmap' argument 5 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2277:50: note: Function 'push_cmap' argument 5 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:499:14: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:293:26: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:499:14: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:560:18: style: Local variable 'message' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:548:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:560:18: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:848:14: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:791:17: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:848:14: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:996:14: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:886:12: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:996:14: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1013:14: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:886:12: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1013:14: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2262:39: style: Local variable 'forceParam' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:1980:37: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2262:39: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2274:50: performance:inconclusive: Function parameter 'bondtype' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2600:18: style: Consider using std::copy algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/toppush.cpp:2640:36: style: Consider using std::any_of, std::all_of, std::none_of, or std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/toputil.cpp:81:29: style: The scope of the variable 'bSwapParity' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toputil.cpp:200:10: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toputil.cpp:247:17: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toputil.cpp:247:20: style: The scope of the variable 'ri' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toputil.cpp:248:17: style: The scope of the variable 'tpA' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toputil.cpp:248:22: style: The scope of the variable 'tpB' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toputil.cpp:250:17: style: The scope of the variable 'tpnmA' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toputil.cpp:250:25: style: The scope of the variable 'tpnmB' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toputil.cpp:251:17: style: The scope of the variable 'qres' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/toputil.cpp:329:121: performance:inconclusive: Function parameter 'plist' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:988:25: style: The scope of the variable 'bKeep' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:988:32: style: The scope of the variable 'bRemove' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:988:41: style: The scope of the variable 'bAllFD' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:766:50: style:inconclusive: Function 'set_vsites' argument 3 names different: declaration 'atype' definition 'atypes'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.h:55:50: note: Function 'set_vsites' argument 3 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:766:50: note: Function 'set_vsites' argument 3 names different: declaration 'atype' definition 'atypes'.
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:1511:60: style:inconclusive: Function 'clean_vsite_bondeds' argument 1 names different: declaration 'ps' definition 'plist'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.h:67:60: note: Function 'clean_vsite_bondeds' argument 1 names different: declaration 'ps' definition 'plist'.
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:1511:60: note: Function 'clean_vsite_bondeds' argument 1 names different: declaration 'ps' definition 'plist'.
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:1072:44: style: Local variable 'atoms' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:1010:34: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:1072:44: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:1248:17: style: Local variable 'atom' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:1231:25: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:1248:17: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:407:75: performance:inconclusive: Function parameter 'bonds' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:408:75: performance:inconclusive: Function parameter 'angles' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:488:77: performance:inconclusive: Function parameter 'bonds' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:489:77: performance:inconclusive: Function parameter 'angles' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:515:78: performance:inconclusive: Function parameter 'bonds' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:516:78: performance:inconclusive: Function parameter 'angles' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:547:78: performance:inconclusive: Function parameter 'bonds' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:548:78: performance:inconclusive: Function parameter 'angles' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:642:77: performance:inconclusive: Function parameter 'bonds' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:643:77: performance:inconclusive: Function parameter 'angles' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:703:78: performance:inconclusive: Function parameter 'bonds' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:704:78: performance:inconclusive: Function parameter 'angles' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:356:9: style: Consider using std::find_if algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:374:9: style: Consider using std::find_if algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxpreprocess/vsite_parm.cpp:134:9: style: struct member 'Atom2VsiteBond::ftype' is never used. [unusedStructMember]
gromacs-2021.3/src/gromacs/gmxpreprocess/x2top.cpp:334:20: style: The scope of the variable 'tp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/x2top.cpp:335:17: style: The scope of the variable 'tpnm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/x2top.cpp:389:43: style: The scope of the variable 'fp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/x2top.cpp:135:34: style: Local variable 'atoms' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/gmxpreprocess/x2top.cpp:101:42: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxpreprocess/x2top.cpp:135:34: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxpreprocess/x2top.cpp:329:63: performance:inconclusive: Function parameter 'plist' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gpu_utils/device_context.h:70:5: style: Class 'DeviceContext' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/gmxpreprocess/xlate.cpp:84:14: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/gmxpreprocess/xlate.cpp:73:19: style: The scope of the variable '_ptr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/xlate.cpp:74:22: style: The scope of the variable 'na' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/xlate.cpp:153:33: style: The scope of the variable 'resind' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/xlate.cpp:156:19: style: The scope of the variable 'bReorderedNum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/xlate.cpp:156:34: style: The scope of the variable 'bRenamed' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gpu_utils/device_stream.h:107:10: performance:inconclusive: Technically the member function 'DeviceStream::isValid' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/gpu_utils/device_stream.cpp:56:20: note: Technically the member function 'DeviceStream::isValid' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/gpu_utils/device_stream.h:107:10: note: Technically the member function 'DeviceStream::isValid' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/gmxpreprocess/xlate.cpp:157:19: style: The scope of the variable 'bStartTerm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gpu_utils/device_stream.h:110:10: performance:inconclusive: Technically the member function 'DeviceStream::synchronize' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/gpu_utils/device_stream.cpp:61:20: note: Technically the member function 'DeviceStream::synchronize' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/gpu_utils/device_stream.h:110:10: note: Technically the member function 'DeviceStream::synchronize' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/gmxpreprocess/xlate.cpp:157:31: style: The scope of the variable 'bEndTerm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxpreprocess/xlate.cpp:147:58: style:inconclusive: Function 'rename_atoms' argument 5 names different: declaration 'restp' definition 'localPpResidue'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gmxpreprocess/xlate.h:59:58: note: Function 'rename_atoms' argument 5 names different: declaration 'restp' definition 'localPpResidue'.
gromacs-2021.3/src/gromacs/gmxpreprocess/xlate.cpp:147:58: note: Function 'rename_atoms' argument 5 names different: declaration 'restp' definition 'localPpResidue'.
gromacs-2021.3/src/gromacs/gpu_utils/device_stream_manager.cpp:89:58: performance:inconclusive: Function parameter 'simulationWork' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gpu_utils/device_stream_manager.cpp:133:67: performance:inconclusive: Function parameter 'simulationWork' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/gpu_utils/hostallocator.h:190:26: performance:inconclusive: Technically the member function 'gmx::HostAllocationPolicy::select_on_container_copy_construction' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/gpu_utils/hostallocator.cpp:58:58: style:inconclusive: Function 'HostAllocationPolicy' argument 1 names different: declaration 'policy' definition 'pinningPolicy'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/gpu_utils/hostallocator.h:142:40: note: Function 'HostAllocationPolicy' argument 1 names different: declaration 'policy' definition 'pinningPolicy'.
gromacs-2021.3/src/gromacs/gpu_utils/hostallocator.cpp:58:58: note: Function 'HostAllocationPolicy' argument 1 names different: declaration 'policy' definition 'pinningPolicy'.
gromacs-2021.3/src/gromacs/gpu_utils/tests/clfftinitializer.cpp:58:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gpu_utils/oclutils.h:143:74: style: Same expression on both sides of '&&'. [duplicateExpression]
gromacs-2021.3/src/gromacs/gpu_utils/tests/device_availability.cpp:89:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gpu_utils/tests/device_stream_manager.cpp:106:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/gpu_utils/tests/hostallocator.cpp:184:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/hardware/cpuinfo.cpp:1085:10: warning: Member variable 'CpuInfo::supportLevel_' is not initialized in the constructor. [uninitMemberVarPrivate]
gromacs-2021.3/src/gromacs/hardware/detecthardware.cpp:152:9: style: Condition 'isMasterRankOfPhysicalNode' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/hardware/detecthardware.cpp:140:41: note: Assignment 'isMasterRankOfPhysicalNode=true', assigned value is 1
gromacs-2021.3/src/gromacs/hardware/detecthardware.cpp:152:9: note: Condition 'isMasterRankOfPhysicalNode' is always true
gromacs-2021.3/src/gromacs/hardware/detecthardware.cpp:154:21: style: Local variable 'errorMessage' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/hardware/detecthardware.cpp:128:17: note: Shadowed declaration
gromacs-2021.3/src/gromacs/hardware/detecthardware.cpp:154:21: note: Shadow variable
gromacs-2021.3/src/gromacs/hardware/detecthardware.cpp:128:17: style: Unused variable: errorMessage [unusedVariable]
gromacs-2021.3/src/gromacs/hardware/device_management_common.cpp:132:50: style: Parameter 'deviceInfo' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/hardware/identifyavx512fmaunits.cpp:268:13: warning: Identical inner 'if' condition is always true. [identicalInnerCondition]
gromacs-2021.3/src/gromacs/hardware/identifyavx512fmaunits.cpp:264:9: note: outer condition: !initialized
gromacs-2021.3/src/gromacs/hardware/identifyavx512fmaunits.cpp:268:13: note: identical inner condition: !initialized
gromacs-2021.3/src/gromacs/hardware/tests/hardwaretopology.cpp:97:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/hardware/printhardware.cpp:76:20: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:201:9: style: Condition 'ret' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:198:12: note: Assignment 'ret=-1', assigned value is -1
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:201:9: note: Condition 'ret' is always true
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:224:9: style: Condition 'ret' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:221:12: note: Assignment 'ret=-1', assigned value is -1
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:224:9: note: Condition 'ret' is always true
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:435:13: style: Condition 'ret<0' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:402:16: note: Assignment 'ret=-1', assigned value is -1
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:435:13: note: Condition 'ret<0' is always true
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:362:13: style: The comparison 'ret == -1' is always true. [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:348:16: note: 'ret' is assigned value '-1' here.
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:362:13: note: The comparison 'ret == -1' is always true.
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:388:13: style: The comparison 'ret == -1' is always true. [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:372:16: note: 'ret' is assigned value '-1' here.
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:388:13: note: The comparison 'ret == -1' is always true.
gromacs-2021.3/src/gromacs/imd/imdsocket.cpp:346:34: style: Parameter 'sock' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/linearalgebra/eigensolver.cpp:50:93: style:inconclusive: Function 'eigensolver' argument 6 names different: declaration 'eigenvec' definition 'eigenvectors'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/linearalgebra/eigensolver.h:64:93: note: Function 'eigensolver' argument 6 names different: declaration 'eigenvec' definition 'eigenvectors'.
gromacs-2021.3/src/gromacs/linearalgebra/eigensolver.cpp:50:93: note: Function 'eigensolver' argument 6 names different: declaration 'eigenvec' definition 'eigenvectors'.
gromacs-2021.3/src/gromacs/linearalgebra/gmx_arpack.cpp:52:13: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dasum.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/daxpy.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dcopy.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/imd/imd.h:203:10: style:inconclusive: Technically the member function 'gmx::ImdSession::fillEnergyRecord' can be const. [functionConst]
gromacs-2021.3/src/gromacs/imd/imd.cpp:1579:18: note: Technically the member function 'gmx::ImdSession::fillEnergyRecord' can be const.
gromacs-2021.3/src/gromacs/imd/imd.h:203:10: note: Technically the member function 'gmx::ImdSession::fillEnergyRecord' can be const.
gromacs-2021.3/src/gromacs/imd/imd.h:159:5: style: Class 'ImdSession' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/imd/imd.cpp:152:5: style: Class 'Impl' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/ddot.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dgemm.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/imd/imd.cpp:511:42: portability:inconclusive: Casting from float * to char * is not portable due to different binary data representations on different platforms. [invalidPointerCast]
gromacs-2021.3/src/gromacs/imd/imd.cpp:387:24: style: The scope of the variable 'countread' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/imd/imd.cpp:425:24: style: The scope of the variable 'countwritten' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dgemv.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dger.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dnrm2.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/drot.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dscal.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dswap.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dsymv.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dsyr2.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dsyr2k.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dtrmm.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dtrmv.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/dtrsm.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/idamax.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/isamax.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/sasum.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/saxpy.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/scopy.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/sdot.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/sgemm.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/sgemv.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/sger.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/snrm2.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/srot.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/sscal.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/sswap.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/ssymv.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/ssyr2.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/ssyr2k.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/strmm.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/strmv.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_blas/strsm.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dbdsdc.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dbdsqr.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dgebd2.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dgebrd.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dgelq2.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dgelqf.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dgeqr2.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dgeqrf.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dgesdd.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dgetf2.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dgetrf.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dgetri.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dgetrs.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlabrd.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlacpy.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlae2.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlaebz.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlaed6.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlaev2.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlagtf.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlagts.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlamrg.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlange.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlanst.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlansy.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlapy2.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlar1vx.cpp:8:6: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlarf.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlarfb.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlarfg.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlarft.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlarnv.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlarrbx.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlarrex.cpp:13:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlarrfx.cpp:11:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlarrvx.cpp:11:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlartg.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlaruv.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlas2.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:558:15: warning:inconclusive: Possible null pointer dereference: ptr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3209:36: note: Assignment 'tmpbuf=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3219:30: note: Calling function 'fgets3', 2nd argument 'tmpbuf' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:558:15: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:563:25: warning:inconclusive: Possible null pointer dereference: ptr [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3209:36: note: Assignment 'tmpbuf=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3219:30: note: Calling function 'fgets3', 2nd argument 'tmpbuf' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:558:34: note: Assuming condition is Assuming condition is false
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:563:25: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1844:22: warning:inconclusive: Possible null pointer dereference: filename [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1825:23: note: Assignment 'filename=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1844:22: note: Null pointer dereference
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlascl.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1852:21: warning:inconclusive: Possible null pointer dereference: filename [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1825:23: note: Assignment 'filename=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1852:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:615:22: error: Pointer addition with NULL pointer. [nullPointerArithmetic]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1980:44: note: Calling function 'read_pdo_data', 4th argument 'nullptr' value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:615:22: note: Null pointer addition
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:862:25: style: The scope of the variable 'nGrptot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1122:16: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1123:66: style: The scope of the variable 'zsym' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1124:13: style: The scope of the variable 'z' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1162:21: style: The scope of the variable 'imin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1232:16: style: The scope of the variable 'blockBase' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1347:13: style: The scope of the variable 'jm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1384:12: style: The scope of the variable 'r' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1609:67: style: The scope of the variable 'maxchange' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1609:90: style: The scope of the variable 'stddev' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1866:21: style: The scope of the variable 'Buffer' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:1866:35: style: The scope of the variable 'gunzip' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:2223:44: style: The scope of the variable 't' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:2754:18: style: The scope of the variable 'ncorr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:2754:25: style: The scope of the variable 'ntot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:2754:45: style: The scope of the variable 'restart' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:2927:17: style: The scope of the variable 'ntot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3040:10: style: The scope of the variable 'bBoundary' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3084:40: style: The scope of the variable 'nHist' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3084:47: style: The scope of the variable 'winmin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3084:55: style: The scope of the variable 'groupmin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3085:38: style: The scope of the variable 'pos' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3085:57: style: The scope of the variable 'diff' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasd0.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3085:63: style: The scope of the variable 'fAv' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3085:68: style: The scope of the variable 'distmin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3086:12: style: The scope of the variable 'fp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3208:21: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasd1.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3456:17: style: The scope of the variable 'en_unit_label' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_wham.cpp:3573:23: style: The scope of the variable 'fnPull' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasd2.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasd3.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasd4.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasd5.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasd6.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasd7.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasd8.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasda.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasdq.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasdt.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlaset.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasq1.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasq2.cpp:12:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasq3.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasq4.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasq5.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasq6.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasrt.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasr.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasrt2.cpp:3:6: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlassq.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlaswp.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlasv2.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dlatrd.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dorg2r.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dorgbr.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dorgl2.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dorglq.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dorgqr.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dorm2l.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dorm2r.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dormbr.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dorml2.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dormlq.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dormql.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dormqr.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dormtr.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dstebz.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dstegr.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dstein.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dsteqr.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dsterf.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dstevr.cpp:14:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dsyevr.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dsytd2.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dsytrd.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dtrti2.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/ilasrt2.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/dtrtri.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sbdsdc.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sgebd2.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sbdsqr.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sgebrd.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sgelq2.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sgelqf.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sgeqr2.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sgeqrf.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sgesdd.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sgetf2.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sgetrf.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sgetri.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sgetrs.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slabrd.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slacpy.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slae2.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slaebz.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slaed6.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slaev2.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slagtf.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slamrg.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slagts.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slange.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slanst.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slapy2.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slansy.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slar1vx.cpp:8:6: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slarf.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slarfg.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slarfb.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slarft.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slarnv.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slarrbx.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slarrex.cpp:13:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slarrfx.cpp:11:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slartg.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slarrvx.cpp:11:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slaruv.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slas2.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slascl.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasd0.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasd1.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasd2.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasd3.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasd4.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasd5.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasd6.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasd7.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasd8.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasda.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasdq.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slaset.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasdt.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasq1.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasq2.cpp:12:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasq3.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasq4.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasq5.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasq6.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasr.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasrt.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasrt2.cpp:3:6: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slassq.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slasv2.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slaswp.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/slatrd.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sorg2r.cpp:7:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sorgbr.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sorgl2.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sorglq.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sorgqr.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sorm2l.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sorm2r.cpp:4:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sorml2.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sormbr.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sormlq.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sormql.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sormqr.cpp:5:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sormtr.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sstebz.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sstegr.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sstein.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/ssteqr.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/ssterf.cpp:8:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/sstevr.cpp:14:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/ssyevr.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/ssytd2.cpp:10:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/ssytrd.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/strti2.cpp:6:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/gmx_lapack/strtri.cpp:9:1: error: There is an unknown macro here somewhere. Configuration is required. If F77_FUNC is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/linearalgebra/matrix.cpp:128:14: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/linearalgebra/matrix.cpp:128:17: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/linearalgebra/matrix.cpp:129:32: style: The scope of the variable 'id' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/linearalgebra/matrix.cpp:193:12: style: The scope of the variable 'ax' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/linearalgebra/matrix.cpp:190:39: style:inconclusive: Function 'multi_regression' argument 2 names different: declaration 'ny' definition 'nrow'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/linearalgebra/matrix.h:51:39: note: Function 'multi_regression' argument 2 names different: declaration 'ny' definition 'nrow'.
gromacs-2021.3/src/gromacs/linearalgebra/matrix.cpp:190:39: note: Function 'multi_regression' argument 2 names different: declaration 'ny' definition 'nrow'.
gromacs-2021.3/src/gromacs/linearalgebra/matrix.cpp:190:60: style:inconclusive: Function 'multi_regression' argument 4 names different: declaration 'nx' definition 'ncol'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/linearalgebra/matrix.h:51:58: note: Function 'multi_regression' argument 4 names different: declaration 'nx' definition 'ncol'.
gromacs-2021.3/src/gromacs/linearalgebra/matrix.cpp:190:60: note: Function 'multi_regression' argument 4 names different: declaration 'nx' definition 'ncol'.
gromacs-2021.3/src/gromacs/linearalgebra/matrix.cpp:190:53: style: Parameter 'y' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/linearalgebra/sparsematrix.cpp:247:68: style: Parameter 'x' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/linearalgebra/nrjac.cpp:61:34: style: The scope of the variable 'sm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/linearalgebra/nrjac.cpp:168:21: style: Parameter 'm' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/listed_forces/gpubonded_impl.cpp:64:9: style: Consider using std::any_of algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/listed_forces/gpubonded_impl.cpp:85:9: style: Consider using std::any_of algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/listed_forces/disre.cpp:82:43: style: The scope of the variable 'np' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/disre.cpp:83:26: style: The scope of the variable 'hist' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/disre.cpp:78:40: style:inconclusive: Function 'init_disres' argument 9 names different: declaration 'disresdata' definition 'dd'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/listed_forces/disre.h:91:40: note: Function 'init_disres' argument 9 names different: declaration 'disresdata' definition 'dd'.
gromacs-2021.3/src/gromacs/listed_forces/disre.cpp:78:40: note: Function 'init_disres' argument 9 names different: declaration 'disresdata' definition 'dd'.
gromacs-2021.3/src/gromacs/listed_forces/disre.cpp:302:44: style:inconclusive: Function 'calc_disres_R_6' argument 4 names different: declaration 'fa' definition 'forceatoms'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/listed_forces/disre.h:102:44: note: Function 'calc_disres_R_6' argument 4 names different: declaration 'fa' definition 'forceatoms'.
gromacs-2021.3/src/gromacs/listed_forces/disre.cpp:302:44: note: Function 'calc_disres_R_6' argument 4 names different: declaration 'fa' definition 'forceatoms'.
gromacs-2021.3/src/gromacs/listed_forces/disre.cpp:305:44: style:inconclusive: Function 'calc_disres_R_6' argument 7 names different: declaration 'disresdata' definition 'dd'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/listed_forces/disre.h:105:44: note: Function 'calc_disres_R_6' argument 7 names different: declaration 'disresdata' definition 'dd'.
gromacs-2021.3/src/gromacs/listed_forces/disre.cpp:305:44: note: Function 'calc_disres_R_6' argument 7 names different: declaration 'disresdata' definition 'dd'.
gromacs-2021.3/src/gromacs/listed_forces/disre.cpp:641:48: style:inconclusive: Function 'update_disres_history' argument 1 names different: declaration 'disresdata' definition 'dd'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/listed_forces/disre.h:123:48: note: Function 'update_disres_history' argument 1 names different: declaration 'disresdata' definition 'dd'.
gromacs-2021.3/src/gromacs/listed_forces/disre.cpp:641:48: note: Function 'update_disres_history' argument 1 names different: declaration 'disresdata' definition 'dd'.
gromacs-2021.3/src/gromacs/listed_forces/listed_internal.h:70:5: style: Class 'WorkDivision' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/listed_forces/listed_internal.h:98:5: style: Struct 'f_thread_t' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/listed_forces/listed_forces.cpp:102:73: performance: Function parameter 'interactionSelection' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:153:13: warning:inconclusive: Possible null pointer dereference: nr_ex [nullPointer]
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:122:36: note: Assignment 'nr_ex=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:153:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:366:11: style: The scope of the variable 'eig' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:659:25: style: The scope of the variable 'ex' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:659:29: style: The scope of the variable 'power' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:386:44: style:inconclusive: Function 'calc_orires_dev' argument 3 names different: declaration 'fa' definition 'forceatoms'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/listed_forces/orires.h:90:53: note: Function 'calc_orires_dev' argument 3 names different: declaration 'fa' definition 'forceatoms'.
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:386:44: note: Function 'calc_orires_dev' argument 3 names different: declaration 'fa' definition 'forceatoms'.
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:392:44: style:inconclusive: Function 'calc_orires_dev' argument 9 names different: declaration 'oriresdata' definition 'od'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/listed_forces/orires.h:96:53: note: Function 'calc_orires_dev' argument 9 names different: declaration 'oriresdata' definition 'od'.
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:392:44: note: Function 'calc_orires_dev' argument 9 names different: declaration 'oriresdata' definition 'od'.
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:754:48: style:inconclusive: Function 'update_orires_history' argument 1 names different: declaration 'oriresdata' definition 'od'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/listed_forces/orires.h:125:48: note: Function 'update_orires_history' argument 1 names different: declaration 'oriresdata' definition 'od'.
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:754:48: note: Function 'update_orires_history' argument 1 names different: declaration 'oriresdata' definition 'od'.
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:267:18: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:241:12: note: Shadowed declaration
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:267:18: note: Shadow variable
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:461:14: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:445:9: note: Shadowed declaration
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:461:14: note: Shadow variable
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:516:22: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:445:9: note: Shadowed declaration
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:516:22: note: Shadow variable
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:547:22: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:445:9: note: Shadowed declaration
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:547:22: note: Shadow variable
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:562:22: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:445:9: note: Shadowed declaration
gromacs-2021.3/src/gromacs/listed_forces/orires.cpp:562:22: note: Shadow variable
gromacs-2021.3/src/gromacs/listed_forces/pairs.cpp:352:24: style: The scope of the variable 'itype' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/pairs.cpp:352:31: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/pairs.cpp:352:35: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/pairs.cpp:352:39: style: The scope of the variable 'gid' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/pairs.cpp:648:40: style:inconclusive: Function 'do_pairs' argument 13 names different: declaration 'havePerturbedPairs' definition 'havePerturbedInteractions'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/listed_forces/pairs.h:79:40: note: Function 'do_pairs' argument 13 names different: declaration 'havePerturbedPairs' definition 'havePerturbedInteractions'.
gromacs-2021.3/src/gromacs/listed_forces/pairs.cpp:648:40: note: Function 'do_pairs' argument 13 names different: declaration 'havePerturbedPairs' definition 'havePerturbedInteractions'.
gromacs-2021.3/src/gromacs/listed_forces/position_restraints.cpp:202:25: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/position_restraints.cpp:202:32: style: The scope of the variable 'd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/position_restraints.cpp:202:35: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/position_restraints.cpp:335:25: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/position_restraints.cpp:335:32: style: The scope of the variable 'd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/position_restraints.cpp:335:35: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/position_restraints.cpp:336:22: style: The scope of the variable 'pr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/tests/bonded.cpp:640:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/3dtransforms.cpp:146:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/3dtransforms.cpp:146:12: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/3dtransforms.cpp:165:9: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/coordinatetransformation.cpp:62:5: style: Class 'Impl' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/math/densityfit.cpp:279:10: style:inconclusive: Technically the member function 'gmx::::CrossCorrelationGradientAtVoxel::operator()' can be const. [functionConst]
gromacs-2021.3/src/gromacs/math/densityfit.cpp:85:5: style: Class 'DensitySimilarityInnerProduct' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/math/densityfittingforce.h:78:5: style: Class 'DensityFittingForce' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/math/densityfit.cpp:170:5: style: Class 'DensitySimilarityRelativeEntropy' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/math/densityfit.cpp:271:5: style: Class 'CrossCorrelationGradientAtVoxel' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/math/densityfit.cpp:309:5: style: Class 'DensitySimilarityCrossCorrelation' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/math/exponentialmovingaverage.h:94:5: style: Class 'ExponentialMovingAverage' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/math/functions.cpp:101:38: style: Condition '(tmp2=tmp1>>8)!=0' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/math/functions.cpp:99:26: note: Assuming that condition '(tmp1=n>>16)!=0' is not redundant
gromacs-2021.3/src/gromacs/math/functions.cpp:101:38: note: Condition '(tmp2=tmp1>>8)!=0' is always true
gromacs-2021.3/src/gromacs/math/functions.cpp:66:34: style:inconclusive: Function 'log2I' argument 1 names different: declaration 'x' definition 'n'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/math/functions.h:130:34: note: Function 'log2I' argument 1 names different: declaration 'x' definition 'n'.
gromacs-2021.3/src/gromacs/math/functions.cpp:66:34: note: Function 'log2I' argument 1 names different: declaration 'x' definition 'n'.
gromacs-2021.3/src/gromacs/math/functions.cpp:112:34: style:inconclusive: Function 'log2I' argument 1 names different: declaration 'x' definition 'n'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/math/functions.h:141:34: note: Function 'log2I' argument 1 names different: declaration 'x' definition 'n'.
gromacs-2021.3/src/gromacs/math/functions.cpp:112:34: note: Function 'log2I' argument 1 names different: declaration 'x' definition 'n'.
gromacs-2021.3/src/gromacs/math/functions.cpp:145:33: style:inconclusive: Function 'log2I' argument 1 names different: declaration 'x' definition 'n'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/math/functions.h:108:33: note: Function 'log2I' argument 1 names different: declaration 'x' definition 'n'.
gromacs-2021.3/src/gromacs/math/functions.cpp:145:33: note: Function 'log2I' argument 1 names different: declaration 'x' definition 'n'.
gromacs-2021.3/src/gromacs/math/functions.cpp:151:33: style:inconclusive: Function 'log2I' argument 1 names different: declaration 'x' definition 'n'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/math/functions.h:119:33: note: Function 'log2I' argument 1 names different: declaration 'x' definition 'n'.
gromacs-2021.3/src/gromacs/math/functions.cpp:151:33: note: Function 'log2I' argument 1 names different: declaration 'x' definition 'n'.
gromacs-2021.3/src/gromacs/math/do_fit.cpp:296:16: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/optimization.cpp:52:80: style:inconclusive: Function 'nelderMead' argument 2 names different: declaration 'initialGuess' definition 'initalGuess'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/math/optimization.h:124:80: note: Function 'nelderMead' argument 2 names different: declaration 'initialGuess' definition 'initalGuess'.
gromacs-2021.3/src/gromacs/math/optimization.cpp:52:80: note: Function 'nelderMead' argument 2 names different: declaration 'initialGuess' definition 'initalGuess'.
gromacs-2021.3/src/gromacs/math/tests/arrayrefwithpadding.cpp:68:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/tests/coordinatetransformation.cpp:87:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/tests/densityfit.cpp:79:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/gausstransform.h:120:27: style:inconclusive: Technically the member function 'gmx::GaussianOn1DLattice::view' can be const. [functionConst]
gromacs-2021.3/src/gromacs/math/gausstransform.cpp:189:44: note: Technically the member function 'gmx::GaussianOn1DLattice::view' can be const.
gromacs-2021.3/src/gromacs/math/gausstransform.h:120:27: note: Technically the member function 'gmx::GaussianOn1DLattice::view' can be const.
gromacs-2021.3/src/gromacs/math/gausstransform.cpp:177:46: style:inconclusive: Function 'GaussianOn1DLattice' argument 1 names different: declaration 'numGridPointsForSpreadingHalfWidth' definition 'numGridPointsForSpreadingHalfWidth_'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/math/gausstransform.h:87:29: note: Function 'GaussianOn1DLattice' argument 1 names different: declaration 'numGridPointsForSpreadingHalfWidth' definition 'numGridPointsForSpreadingHalfWidth_'.
gromacs-2021.3/src/gromacs/math/gausstransform.cpp:177:46: note: Function 'GaussianOn1DLattice' argument 1 names different: declaration 'numGridPointsForSpreadingHalfWidth' definition 'numGridPointsForSpreadingHalfWidth_'.
gromacs-2021.3/src/gromacs/math/gausstransform.cpp:184:57: style:inconclusive: Function 'spread' argument 2 names different: declaration 'latticeOffset' definition 'dx'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/math/gausstransform.h:118:40: note: Function 'spread' argument 2 names different: declaration 'latticeOffset' definition 'dx'.
gromacs-2021.3/src/gromacs/math/gausstransform.cpp:184:57: note: Function 'spread' argument 2 names different: declaration 'latticeOffset' definition 'dx'.
gromacs-2021.3/src/gromacs/math/tests/densityfittingforce.cpp:85:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/gausstransform.cpp:343:94: style:inconclusive: Function 'add' argument 1 names different: declaration 'localParamters' definition 'localParameters'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/math/gausstransform.cpp:319:74: note: Function 'add' argument 1 names different: declaration 'localParamters' definition 'localParameters'.
gromacs-2021.3/src/gromacs/math/gausstransform.cpp:343:94: note: Function 'add' argument 1 names different: declaration 'localParamters' definition 'localParameters'.
gromacs-2021.3/src/gromacs/math/gausstransform.cpp:394:81: style:inconclusive: Function 'GaussTransform3D' argument 2 names different: declaration 'globalParameters' definition 'kernelShapeParameters'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/math/gausstransform.h:175:67: note: Function 'GaussTransform3D' argument 2 names different: declaration 'globalParameters' definition 'kernelShapeParameters'.
gromacs-2021.3/src/gromacs/math/gausstransform.cpp:394:81: note: Function 'GaussTransform3D' argument 2 names different: declaration 'globalParameters' definition 'kernelShapeParameters'.
gromacs-2021.3/src/gromacs/math/tests/dofit.cpp:71:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/tests/exponentialmovingaverage.cpp:64:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/tests/functions.cpp:80:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/tests/gausstransform.cpp:83:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/tests/invertmatrix.cpp:81:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/tests/matrix.cpp:76:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/tests/multidimarray.cpp:90:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/tests/neldermead.cpp:82:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/tests/optimization.cpp:75:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/tests/paddedvector.cpp:86:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/tests/vectypes.cpp:75:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/math/veccompare.cpp:115:12: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/veccompare.cpp:115:15: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/veccompare.cpp:116:12: style: The scope of the variable 'd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/veccompare.cpp:116:15: style: The scope of the variable 'ssd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/boxdeformation.h:69:10: style:inconclusive: Technically the member function 'gmx::BoxDeformation::apply' can be const. [functionConst]
gromacs-2021.3/src/gromacs/mdlib/boxdeformation.cpp:111:22: note: Technically the member function 'gmx::BoxDeformation::apply' can be const.
gromacs-2021.3/src/gromacs/mdlib/boxdeformation.h:69:10: note: Technically the member function 'gmx::BoxDeformation::apply' can be const.
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:264:19: style: The scope of the variable 'ki' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:264:23: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:264:29: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:264:33: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:332:19: style: The scope of the variable 'ki' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:332:23: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:332:29: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:332:33: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:51:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:387:19: style: The scope of the variable 'ki' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:66:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:387:23: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:66:12: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:387:29: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:102:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:387:33: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:117:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:612:13: style: The scope of the variable 'ki' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:117:12: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:612:17: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:171:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:612:21: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:171:12: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:612:25: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:198:17: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:700:13: style: The scope of the variable 'ki' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:198:20: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:700:17: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:235:17: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:700:21: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:235:20: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:700:25: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/math/vecdump.cpp:100:93: style:inconclusive: Function 'pr_bvec' argument 6 names different: declaration 'bShowNnumbers' definition 'bShowNumbers'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/math/vecdump.h:48:93: note: Function 'pr_bvec' argument 6 names different: declaration 'bShowNnumbers' definition 'bShowNumbers'.
gromacs-2021.3/src/gromacs/math/vecdump.cpp:100:93: note: Function 'pr_bvec' argument 6 names different: declaration 'bShowNnumbers' definition 'bShowNumbers'.
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:745:13: style: The scope of the variable 'ki' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:745:17: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:745:21: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:745:25: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:803:10: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:803:13: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:803:16: style: The scope of the variable 'aO' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:803:20: style: The scope of the variable 'aH1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:803:25: style: The scope of the variable 'aH2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:803:30: style: The scope of the variable 'aD' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:803:34: style: The scope of the variable 'aS' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:803:38: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:803:44: style: The scope of the variable 'type0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:803:51: style: The scope of the variable 'ki' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:944:13: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:944:19: style: The scope of the variable 'a1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:944:23: style: The scope of the variable 'da1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:944:28: style: The scope of the variable 'a2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:944:32: style: The scope of the variable 'da2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:1239:16: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:1239:20: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:1239:24: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:1239:28: style: The scope of the variable 't1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:1239:32: style: The scope of the variable 't2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:1239:36: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:1561:16: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:1561:20: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:1561:24: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:1561:36: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2221:13: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2221:19: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2221:23: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2221:27: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2221:31: style: The scope of the variable 'al' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2289:16: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2289:22: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2289:26: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2290:10: style: The scope of the variable 't1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2417:10: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2417:14: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2417:18: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2417:22: style: The scope of the variable 'al' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2417:29: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2526:18: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2526:22: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2526:26: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2526:30: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2527:12: style: The scope of the variable 't1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2527:16: style: The scope of the variable 't2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2628:16: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2628:22: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2628:26: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2628:30: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2628:34: style: The scope of the variable 'al' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2631:10: style: The scope of the variable 't1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2631:14: style: The scope of the variable 't2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2736:10: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2736:16: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2736:20: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2736:24: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2736:28: style: The scope of the variable 'al' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2737:10: style: The scope of the variable 't1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2737:14: style: The scope of the variable 't2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2990:9: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2990:13: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2990:17: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2990:21: style: The scope of the variable 'al' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2990:25: style: The scope of the variable 'am' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2991:9: style: The scope of the variable 'a1i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2991:14: style: The scope of the variable 'a1j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2991:19: style: The scope of the variable 'a1k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2991:24: style: The scope of the variable 'a1l' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2991:29: style: The scope of the variable 'a2i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2991:34: style: The scope of the variable 'a2j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2991:39: style: The scope of the variable 'a2k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2991:44: style: The scope of the variable 'a2l' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2992:9: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2994:9: style: The scope of the variable 'iphi1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2995:9: style: The scope of the variable 'iphi2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2997:9: style: The scope of the variable 'pos1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2997:15: style: The scope of the variable 'pos2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2997:21: style: The scope of the variable 'pos3' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:2997:27: style: The scope of the variable 'pos4' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3393:13: style: The scope of the variable 'ki' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3393:17: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3393:21: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3393:25: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3445:13: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3445:17: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3445:21: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3445:25: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3510:13: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3510:17: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3510:21: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3510:25: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/compute_io.cpp:66:12: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3510:34: style: The scope of the variable 't1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/compute_io.cpp:100:13: style: The scope of the variable 'nchars' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3510:38: style: The scope of the variable 't2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/compute_io.cpp:76:18: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/compute_io.cpp:66:12: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/compute_io.cpp:76:18: note: Shadow variable
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3582:13: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/compute_io.cpp:100:20: style: Variable 'nchars' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3582:17: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3582:21: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3582:25: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3582:34: style: The scope of the variable 't1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3582:38: style: The scope of the variable 't2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3710:13: style: The scope of the variable 'ki' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3710:17: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3710:21: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3710:25: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3710:31: style: The scope of the variable 'table' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3758:13: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3758:17: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3758:21: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3758:33: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3758:39: style: The scope of the variable 'table' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3831:13: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3831:19: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3831:23: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3831:27: style: The scope of the variable 'ak' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3831:31: style: The scope of the variable 'al' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/listed_forces/bonded.cpp:3831:35: style: The scope of the variable 'table' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/calc_verletbuf.cpp:843:20: style: The scope of the variable 'ib' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/calc_verletbuf.cpp:830:53: style:inconclusive: Function 'calcVerletBufferSize' argument 3 names different: declaration 'inputrec' definition 'ir'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/calc_verletbuf.h:121:53: note: Function 'calcVerletBufferSize' argument 3 names different: declaration 'inputrec' definition 'ir'.
gromacs-2021.3/src/gromacs/mdlib/calc_verletbuf.cpp:830:53: note: Function 'calcVerletBufferSize' argument 3 names different: declaration 'inputrec' definition 'ir'.
gromacs-2021.3/src/gromacs/mdlib/calc_verletbuf.cpp:422:21: style: Local variable 'a' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/calc_verletbuf.cpp:329:55: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/calc_verletbuf.cpp:422:21: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/calc_verletbuf.cpp:1233:17: style: Consider using std::find_if algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdlib/energydrifttracker.h:62:5: style: Class 'EnergyDriftTracker' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/mdlib/enerdata_utils.cpp:274:26: style: Local variable 'dlam' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/enerdata_utils.cpp:269:22: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/enerdata_utils.cpp:274:26: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/enerdata_utils.cpp:169:21: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1007:20: warning: Member variable 'Impl::masses_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1007:20: warning: Member variable 'Impl::inverseMasses_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1007:20: warning: Member variable 'Impl::hasMassPerturbedAtoms_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/mdlib/dispersioncorrection.cpp:613:20: style: Local variable 'enerdiff' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/dispersioncorrection.cpp:604:16: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/dispersioncorrection.cpp:613:20: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1007:20: warning: Member variable 'Impl::cFREEZE_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/mdlib/dispersioncorrection.cpp:112:80: performance:inconclusive: Function parameter 'nonbondedForceParameters' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/constr.h:211:9: style:inconclusive: Technically the member function 'gmx::Constraints::numConstraintsTotal' can be const. [functionConst]
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:758:18: note: Technically the member function 'gmx::Constraints::numConstraintsTotal' can be const.
gromacs-2021.3/src/gromacs/mdlib/constr.h:211:9: note: Technically the member function 'gmx::Constraints::numConstraintsTotal' can be const.
gromacs-2021.3/src/gromacs/mdlib/dispersioncorrection.cpp:522:71: performance:inconclusive: Function parameter 'nonbondedForceParameters' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/ebin.cpp:144:18: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/ebin.cpp:145:15: style: The scope of the variable 'e' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/ebin.cpp:145:18: style: The scope of the variable 'invmm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/ebin.cpp:145:25: style: The scope of the variable 'diff' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/ebin.cpp:146:20: style: The scope of the variable 'egs' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1191:13: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1191:16: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1012:47: style:inconclusive: Function 'Impl' argument 6 names different: declaration 'ms' definition 'ms_p'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:105:32: note: Function 'Impl' argument 6 names different: declaration 'ms' definition 'ms_p'.
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1012:47: note: Function 'Impl' argument 6 names different: declaration 'ms' definition 'ms_p'.
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1013:47: style:inconclusive: Function 'Impl' argument 7 names different: declaration 'nrnb' definition 'nrnb_p'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:106:32: note: Function 'Impl' argument 7 names different: declaration 'nrnb' definition 'nrnb_p'.
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1013:47: note: Function 'Impl' argument 7 names different: declaration 'nrnb' definition 'nrnb_p'.
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1181:51: style:inconclusive: Function 'do_constrain_first' argument 1 names different: declaration 'log' definition 'fplog'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/constr.h:310:51: note: Function 'do_constrain_first' argument 1 names different: declaration 'log' definition 'fplog'.
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1181:51: note: Function 'do_constrain_first' argument 1 names different: declaration 'log' definition 'fplog'.
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1183:51: style:inconclusive: Function 'do_constrain_first' argument 3 names different: declaration 'inputrec' definition 'ir'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/constr.h:312:51: note: Function 'do_constrain_first' argument 3 names different: declaration 'inputrec' definition 'ir'.
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:1183:51: note: Function 'do_constrain_first' argument 3 names different: declaration 'inputrec' definition 'ir'.
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:611:22: style: Local variable 'buf' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:385:11: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:611:22: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/constr.cpp:987:17: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdlib/coupling.cpp:354:32: style: The scope of the variable 'kT' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/coupling.cpp:356:14: style: The scope of the variable 'ivxi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/coupling.cpp:356:21: style: The scope of the variable 'ixi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/coupling.cpp:546:10: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/coupling.cpp:546:13: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/coupling.cpp:815:10: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/coupling.cpp:2066:21: style: The scope of the variable 'ga' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/coupling.cpp:2147:19: style: The scope of the variable 'npoints' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/coupling.cpp:1572:64: style:inconclusive: Function 'init_npt_vars' argument 3 names different: declaration 'Mass' definition 'MassQ'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/coupling.h:147:64: note: Function 'init_npt_vars' argument 3 names different: declaration 'Mass' definition 'MassQ'.
gromacs-2021.3/src/gromacs/mdlib/coupling.cpp:1572:64: note: Function 'init_npt_vars' argument 3 names different: declaration 'Mass' definition 'MassQ'.
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:1135:21: style: Condition 'bDoDHDL' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:1065:31: note: Assuming that condition 'bDoDHDL' is not redundant
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:1135:21: note: Condition 'bDoDHDL' is always true
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:136:24: style: The scope of the variable 'vir_nm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:138:24: style: The scope of the variable 'sv_nm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:141:24: style: The scope of the variable 'fv_nm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:144:24: style: The scope of the variable 'pres_nm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:146:24: style: The scope of the variable 'surft_nm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:147:24: style: The scope of the variable 'mu_nm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:148:24: style: The scope of the variable 'vcos_nm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:149:24: style: The scope of the variable 'visc_nm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:153:29: style: The scope of the variable 'gnm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:155:29: style: The scope of the variable 'bufi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:156:39: style: The scope of the variable 'nj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:156:46: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:156:49: style: The scope of the variable 'kk' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:664:17: style: The scope of the variable 'lambdastate' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:665:37: style: The scope of the variable 'nsetsbegin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:669:41: style: The scope of the variable 'lambda_name_str' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:879:18: style: The scope of the variable 'kk' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:879:22: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:879:25: style: The scope of the variable 'gid' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:883:12: style: The scope of the variable 'store_dhdl' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:868:64: style:inconclusive: Function 'addDataAtEnergyStep' argument 8 names different: declaration 'lastbox' definition 'box'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.h:186:54: note: Function 'addDataAtEnergyStep' argument 8 names different: declaration 'lastbox' definition 'box'.
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:868:64: note: Function 'addDataAtEnergyStep' argument 8 names different: declaration 'lastbox' definition 'box'.
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:566:13: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:156:29: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:566:13: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:828:25: style: Local variable 'buf' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:702:17: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:828:25: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:1412:25: style: Local variable 'padding' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:1394:17: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/energyoutput.cpp:1412:25: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/force.cpp:128:14: style: The scope of the variable 'status' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/freeenergyparameters.cpp:136:29: style: Condition 'currentGlobalLambda>=1' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/mdlib/freeenergyparameters.cpp:128:29: note: Assuming that condition 'currentGlobalLambda<=0' is not redundant
gromacs-2021.3/src/gromacs/mdlib/freeenergyparameters.cpp:136:29: note: Condition 'currentGlobalLambda>=1' is always true
gromacs-2021.3/src/gromacs/mdlib/gpuforcereduction.h:88:10: performance:inconclusive: Technically the member function 'gmx::GpuForceReduction::registerNbnxmForce' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/mdlib/gpuforcereduction_impl.cpp:79:25: note: Technically the member function 'gmx::GpuForceReduction::registerNbnxmForce' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/mdlib/gpuforcereduction.h:88:10: note: Technically the member function 'gmx::GpuForceReduction::registerNbnxmForce' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/mdlib/gpuforcereduction.h:94:10: performance:inconclusive: Technically the member function 'gmx::GpuForceReduction::registerRvecForce' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/mdlib/gpuforcereduction_impl.cpp:85:25: note: Technically the member function 'gmx::GpuForceReduction::registerRvecForce' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/mdlib/gpuforcereduction.h:94:10: note: Technically the member function 'gmx::GpuForceReduction::registerRvecForce' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/mdlib/gpuforcereduction.h:111:10: performance:inconclusive: Technically the member function 'gmx::GpuForceReduction::reinit' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/mdlib/gpuforcereduction_impl.cpp:68:25: note: Technically the member function 'gmx::GpuForceReduction::reinit' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/mdlib/gpuforcereduction.h:111:10: note: Technically the member function 'gmx::GpuForceReduction::reinit' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/mdlib/gpuforcereduction.h:119:10: performance:inconclusive: Technically the member function 'gmx::GpuForceReduction::execute' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/mdlib/gpuforcereduction_impl.cpp:97:25: note: Technically the member function 'gmx::GpuForceReduction::execute' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/mdlib/gpuforcereduction.h:119:10: note: Technically the member function 'gmx::GpuForceReduction::execute' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/mdlib/gmx_omp_nthreads.cpp:405:17: style: Condition 'nth_max==nth_min' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/mdlib/gmx_omp_nthreads.cpp:399:21: note: nth_max is assigned 'modth.gnth' here.
gromacs-2021.3/src/gromacs/mdlib/gmx_omp_nthreads.cpp:398:21: note: nth_min is assigned 'modth.gnth' here.
gromacs-2021.3/src/gromacs/mdlib/gmx_omp_nthreads.cpp:405:17: note: Condition 'nth_max==nth_min' is always true
gromacs-2021.3/src/gromacs/mdlib/groupcoord.cpp:267:71: style:inconclusive: Function 'get_sum_of_positions' argument 3 names different: declaration 'nr' definition 'nat'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/groupcoord.h:170:65: note: Function 'get_sum_of_positions' argument 3 names different: declaration 'nr' definition 'nat'.
gromacs-2021.3/src/gromacs/mdlib/groupcoord.cpp:267:71: note: Function 'get_sum_of_positions' argument 3 names different: declaration 'nr' definition 'nat'.
gromacs-2021.3/src/gromacs/mdlib/groupcoord.cpp:303:68: style:inconclusive: Function 'get_center' argument 4 names different: declaration 'center' definition 'rcenter'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/groupcoord.h:154:62: note: Function 'get_center' argument 4 names different: declaration 'center' definition 'rcenter'.
gromacs-2021.3/src/gromacs/mdlib/groupcoord.cpp:303:68: note: Function 'get_center' argument 4 names different: declaration 'center' definition 'rcenter'.
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:235:17: style: The scope of the variable 'totalsamples' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:351:14: style: The scope of the variable 'min_nvalm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:351:25: style: The scope of the variable 'min_nvalp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/gmx_omp_nthreads.cpp:167:14: style: The scope of the variable 'buffer' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/leapfrog_gpu_sycl.cpp:238:32: style: Variable 'ha_lambdas_[i]' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:351:36: style: The scope of the variable 'maxc' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/gmx_omp_nthreads.cpp:434:49: style:inconclusive: Function 'gmx_omp_nthreads_init' argument 1 names different: declaration 'fplog' definition 'mdlog'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/gmx_omp_nthreads.h:75:49: note: Function 'gmx_omp_nthreads_init' argument 1 names different: declaration 'fplog' definition 'mdlog'.
gromacs-2021.3/src/gromacs/mdlib/gmx_omp_nthreads.cpp:434:49: note: Function 'gmx_omp_nthreads_init' argument 1 names different: declaration 'fplog' definition 'mdlog'.
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:355:14: style: The scope of the variable 'dwp_array' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/gmx_omp_nthreads.cpp:440:49: style:inconclusive: Function 'gmx_omp_nthreads_init' argument 7 names different: declaration 'bCurrNodePMEOnly' definition 'bThisNodePMEOnly'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/gmx_omp_nthreads.h:81:49: note: Function 'gmx_omp_nthreads_init' argument 7 names different: declaration 'bCurrNodePMEOnly' definition 'bThisNodePMEOnly'.
gromacs-2021.3/src/gromacs/mdlib/gmx_omp_nthreads.cpp:440:49: note: Function 'gmx_omp_nthreads_init' argument 7 names different: declaration 'bCurrNodePMEOnly' definition 'bThisNodePMEOnly'.
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:355:26: style: The scope of the variable 'dwm_array' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:357:13: style: The scope of the variable 'lam_variance' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:358:13: style: The scope of the variable 'p_k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:1168:23: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:1168:26: style: The scope of the variable 'ifep' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:1168:32: style: The scope of the variable 'jfep' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:1170:17: style: The scope of the variable 'print_names' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:1353:34: style: The scope of the variable 'totalsamples' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:1470:18: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:1473:29: style: The scope of the variable 'gt' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:1470:15: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:1353:17: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/expanded.cpp:1470:15: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/md_support.cpp:276:57: performance:inconclusive: Function parameter 'x' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/md_support.cpp:277:57: performance:inconclusive: Function parameter 'v' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/forcerec.cpp:1262:19: style: The scope of the variable 'fcdata' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/forcerec.cpp:951:53: style:inconclusive: Function 'init_forcerec' argument 1 names different: declaration 'fplog' definition 'fp'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/forcerec.h:104:53: note: Function 'init_forcerec' argument 1 names different: declaration 'fplog' definition 'fp'.
gromacs-2021.3/src/gromacs/mdlib/forcerec.cpp:951:53: note: Function 'init_forcerec' argument 1 names different: declaration 'fplog' definition 'fp'.
gromacs-2021.3/src/gromacs/mdlib/forcerec.cpp:302:21: style: Consider using std::any_of algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdlib/mdatoms.cpp:123:105: style:inconclusive: Function 'makeMDAtoms' argument 4 names different: declaration 'useGpuForPme' definition 'rankHasPmeGpuTask'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/mdatoms.h:109:99: note: Function 'makeMDAtoms' argument 4 names different: declaration 'useGpuForPme' definition 'rankHasPmeGpuTask'.
gromacs-2021.3/src/gromacs/mdlib/mdatoms.cpp:123:105: note: Function 'makeMDAtoms' argument 4 names different: declaration 'useGpuForPme' definition 'rankHasPmeGpuTask'.
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:97:5: warning: Member variable 'AtomPair::index1' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:97:5: warning: Member variable 'AtomPair::index2' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:2040:24: style: The comparison 'simd_width > 1' is always false. [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:220:31: note: 'simd_width' is assigned value '1' here.
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:2040:24: note: The comparison 'simd_width > 1' is always false.
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:1434:52: style:inconclusive: Function 'init_lincs' argument 4 names different: declaration 'atomsToConstraintsPerMolType' definition 'atomToConstraintsPerMolType'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/lincs.h:83:52: note: Function 'init_lincs' argument 4 names different: declaration 'atomsToConstraintsPerMolType' definition 'atomToConstraintsPerMolType'.
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:1434:52: note: Function 'init_lincs' argument 4 names different: declaration 'atomsToConstraintsPerMolType' definition 'atomToConstraintsPerMolType'.
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:2266:54: style:inconclusive: Function 'constrain_lincs' argument 8 names different: declaration 'x' definition 'xPadded'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/lincs.h:110:54: note: Function 'constrain_lincs' argument 8 names different: declaration 'x' definition 'xPadded'.
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:2266:54: note: Function 'constrain_lincs' argument 8 names different: declaration 'x' definition 'xPadded'.
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:2267:54: style:inconclusive: Function 'constrain_lincs' argument 9 names different: declaration 'xprime' definition 'xprimePadded'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/lincs.h:111:54: note: Function 'constrain_lincs' argument 9 names different: declaration 'xprime' definition 'xprimePadded'.
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:2267:54: note: Function 'constrain_lincs' argument 9 names different: declaration 'xprime' definition 'xprimePadded'.
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:1371:28: style: Local variable 'iap' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:1364:20: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:1371:28: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:1387:36: style: Local variable 'iap' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:1371:28: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/lincs.cpp:1387:36: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/mdebin_bar.cpp:384:21: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/mdebin_bar.cpp:385:15: style: The scope of the variable 'lambda_vec' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/mdebin_bar.cpp:112:13: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/mdebin_bar.cpp:81:9: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/mdebin_bar.cpp:112:13: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/mdebin_bar.cpp:274:26: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/mdebin_bar.cpp:240:13: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/mdebin_bar.cpp:274:26: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/mdebin_bar.cpp:572:14: style: Variable 'n' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/mdlib/mdoutf.cpp:119:18: style: The scope of the variable 'appendMode' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/mdoutf.cpp:119:38: style: The scope of the variable 'writeMode' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/mdoutf.cpp:119:57: style: The scope of the variable 'filemode' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/mdoutf.cpp:121:18: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/mdoutf.cpp:408:14: style: Local variable 'buf' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/mdoutf.cpp:308:15: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/mdoutf.cpp:408:14: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/nsgrid.cpp:461:9: style: The scope of the variable 'nr_old' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/nsgrid.cpp:461:17: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/nsgrid.cpp:652:14: style: The scope of the variable 'zone' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/nsgrid.cpp:652:20: style: The scope of the variable 'ccg0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/nsgrid.cpp:652:26: style: The scope of the variable 'ccg1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/perf_est.cpp:204:17: style: The scope of the variable 'nbonds' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/nsgrid.cpp:652:39: style: The scope of the variable 'not_used' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/nsgrid.cpp:477:36: style:inconclusive: Function 'grid_first' argument 1 names different: declaration 'log' definition 'fplog'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/nsgrid.h:127:38: note: Function 'grid_first' argument 1 names different: declaration 'log' definition 'fplog'.
gromacs-2021.3/src/gromacs/mdlib/nsgrid.cpp:477:36: note: Function 'grid_first' argument 1 names different: declaration 'log' definition 'fplog'.
gromacs-2021.3/src/gromacs/mdlib/rbin.cpp:73:16: style: The scope of the variable 'rest' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/nsgrid.cpp:484:36: style:inconclusive: Function 'grid_first' argument 8 names different: declaration 'rlong' definition 'rlist'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/nsgrid.h:134:38: note: Function 'grid_first' argument 8 names different: declaration 'rlong' definition 'rlist'.
gromacs-2021.3/src/gromacs/mdlib/nsgrid.cpp:484:36: note: Function 'grid_first' argument 8 names different: declaration 'rlong' definition 'rlist'.
gromacs-2021.3/src/gromacs/mdlib/rbin.cpp:111:16: style: The scope of the variable 'rest' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/settle.cpp:156:13: warning: Member variable 'SettleData::numSettles_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/mdlib/settle.h:121:5: style: Class 'SettleData' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/mdlib/settle.cpp:279:39: style: The scope of the variable 'ow1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/settle.cpp:279:44: style: The scope of the variable 'hw2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/settle.cpp:279:49: style: The scope of the variable 'hw3' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/settle.cpp:114:29: warning: Function 'settleParameters' argument order different: declaration 'mO, mH, dOH, invmO, invmH, dHH' definition 'mO, mH, invmO, invmH, dOH, dHH' [funcArgOrderDifferent]
gromacs-2021.3/src/gromacs/mdlib/settle.h:112:40: note: Function 'settleParameters' argument order different: declaration 'mO, mH, dOH, invmO, invmH, dHH' definition 'mO, mH, invmO, invmH, dOH, dHH'
gromacs-2021.3/src/gromacs/mdlib/settle.cpp:114:29: note: Function 'settleParameters' argument order different: declaration 'mO, mH, dOH, invmO, invmH, dHH' definition 'mO, mH, invmO, invmH, dOH, dHH'
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:389:60: style: The comparison 'error == 0' is always true. [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:386:17: note: 'error' is assigned value '0' here.
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:389:60: note: The comparison 'error == 0' is always true.
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:392:48: style: The comparison 'error == 0' is always true. [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:386:17: note: 'error' is assigned value '0' here.
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:392:48: note: The comparison 'error == 0' is always true.
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:611:10: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:611:14: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:674:13: style: The scope of the variable 'n0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:674:23: style: The scope of the variable 'blen' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:674:29: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:274:34: style:inconclusive: Function 'cshake' argument 5 names different: declaration 'dist2' definition 'constraint_distance_squared'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/shake.h:135:34: note: Function 'cshake' argument 5 names different: declaration 'dist2' definition 'constraint_distance_squared'.
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:274:34: note: Function 'cshake' argument 5 names different: declaration 'dist2' definition 'constraint_distance_squared'.
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:275:34: style:inconclusive: Function 'cshake' argument 6 names different: declaration 'xp' definition 'positions'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/shake.h:136:34: note: Function 'cshake' argument 6 names different: declaration 'xp' definition 'positions'.
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:275:34: note: Function 'cshake' argument 6 names different: declaration 'xp' definition 'positions'.
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:277:34: style:inconclusive: Function 'cshake' argument 8 names different: declaration 'rij' definition 'initial_displacements'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/shake.h:138:34: note: Function 'cshake' argument 8 names different: declaration 'rij' definition 'initial_displacements'.
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:277:34: note: Function 'cshake' argument 8 names different: declaration 'rij' definition 'initial_displacements'.
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:444:49: performance:inconclusive: Function parameter 'prime' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:660:51: performance:inconclusive: Function parameter 'x_s' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:661:51: performance:inconclusive: Function parameter 'prime' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:766:52: performance:inconclusive: Function parameter 'x_s' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:767:52: performance:inconclusive: Function parameter 'xprime' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:768:52: performance:inconclusive: Function parameter 'vprime' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/shake.cpp:774:52: performance:inconclusive: Function parameter 'v' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/simulationsignal.h:149:10: style:inconclusive: Technically the member function 'gmx::SimulationSignaller::setSignals' can be const. [functionConst]
gromacs-2021.3/src/gromacs/mdlib/simulationsignal.cpp:122:27: note: Technically the member function 'gmx::SimulationSignaller::setSignals' can be const.
gromacs-2021.3/src/gromacs/mdlib/simulationsignal.h:149:10: note: Technically the member function 'gmx::SimulationSignaller::setSignals' can be const.
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:279:19: style: The scope of the variable 'gid' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:386:20: style: The scope of the variable 'at' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:467:19: style: The scope of the variable 'c' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:467:22: style: The scope of the variable 'outsidesum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:556:20: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:562:14: style: The scope of the variable 'dist' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:718:24: style: The scope of the variable 'mol_id' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:718:32: style: The scope of the variable 'at' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:718:36: style: The scope of the variable 'block' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:847:15: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:847:21: style: The scope of the variable 'natom' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/splitter.cpp:242:30: style: The scope of the variable 'isid' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:847:28: style: The scope of the variable 'nmol' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1020:23: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1020:26: style: The scope of the variable 'rm_bonded_at' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1020:40: style: The scope of the variable 'fr_id' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1020:47: style: The scope of the variable 'fr_i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1020:57: style: The scope of the variable 'tmp_id' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1020:65: style: The scope of the variable 'warn' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1021:23: style: The scope of the variable 'ng' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1021:27: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1021:30: style: The scope of the variable 'max_lip_rm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1021:42: style: The scope of the variable 'ins_grp_id' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1021:54: style: The scope of the variable 'ntype' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1021:61: style: The scope of the variable 'lip_rm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1024:32: style: The scope of the variable 'rest_at' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1026:23: style: The scope of the variable 'mem_p' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1027:23: style: The scope of the variable 'rm_p' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1031:23: style: The scope of the variable 'pbc' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:601:38: style: Local variable 'k' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:556:20: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:601:38: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:671:26: style: Local variable 'k' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:556:20: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:671:26: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:965:29: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:917:11: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:965:29: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1329:21: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1020:23: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1329:21: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:603:39: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:673:27: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdlib/membed.cpp:1095:20: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdlib/tests/calc_verletbuf.cpp:74:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tests/constr.cpp:310:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tests/ebin.cpp:88:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tests/energydrifttracker.cpp:63:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tests/constrtestdata.cpp:80:5: performance: Variable 'title_' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/src/gromacs/mdlib/tests/energyoutput.cpp:610:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tests/constrtestdata.cpp:84:5: performance: Variable 'masses_' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/src/gromacs/mdlib/tests/expanded.cpp:71:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tests/freeenergyparameters.cpp:162:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tests/leapfrog.cpp:206:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tests/constrtestrunners.h:132:5: style: Class 'LincsDeviceConstraintsRunner' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/mdlib/tests/constrtestrunners.cpp:117:19: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdlib/tests/leapfrogtestrunners.h:118:5: style: Class 'LeapFrogDeviceTestRunner' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/mdlib/tests/settle.cpp:309:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tests/settletestdata.h:106:5: style: Class 'SettleTestData' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/mdlib/tests/settletestdata.cpp:107:14: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/tests/settletestdata.cpp:89:16: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/tests/settletestdata.cpp:107:14: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/tests/settletestdata.cpp:127:14: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/tests/settletestdata.cpp:89:16: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/tests/settletestdata.cpp:127:14: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/tests/shake.cpp:241:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tests/settletestrunners.h:132:5: style: Class 'SettleDeviceTestRunner' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/mdlib/tests/simulationsignal.cpp:77:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tests/settletestrunners.cpp:61:59: performance:inconclusive: Function parameter 'pbc' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/tests/updategroups.cpp:148:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tests/updategroupscog.cpp:78:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:70:35: style: Condition 'grp>=ngacc' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:70:22: note: Assuming that condition 'grp<0' is not redundant
gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:62:15: note: Assuming that condition 'ngacc>0' is not redundant
gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:65:47: note: Assuming container is not empty
gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:70:35: note: Condition 'grp>=ngacc' is always false
gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:174:10: style: The scope of the variable 'd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:174:16: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:219:19: style: The scope of the variable 'tcstat' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:215:90: style:inconclusive: Function 'sum_ekin' argument 4 names different: declaration 'bEkinFullStep' definition 'bEkinAveVel'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/tgroup.h:64:90: note: Function 'sum_ekin' argument 4 names different: declaration 'bEkinFullStep' definition 'bEkinAveVel'.
gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:215:90: note: Function 'sum_ekin' argument 4 names different: declaration 'bEkinFullStep' definition 'bEkinAveVel'.
gromacs-2021.3/src/gromacs/mdlib/updategroups.cpp:479:21: style: Consider using std::count_if algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdlib/vcm.cpp:582:54: performance:inconclusive: Function parameter 'x' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/vcm.cpp:583:54: performance:inconclusive: Function parameter 'v' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdlib/update.cpp:1472:83: style:inconclusive: Function 'update_coords' argument 9 names different: declaration 'UpdatePart' definition 'updatePart'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/update.cpp:131:73: note: Function 'update_coords' argument 9 names different: declaration 'UpdatePart' definition 'updatePart'.
gromacs-2021.3/src/gromacs/mdlib/update.cpp:1472:83: note: Function 'update_coords' argument 9 names different: declaration 'UpdatePart' definition 'updatePart'.
gromacs-2021.3/src/gromacs/mdlib/update.cpp:1442:29: style: Variable 'x[i][d]' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/mdlib/update.cpp:1457:18: style: Variable 'x[i]' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/mdlib/sim_util.cpp:1107:20: style: Local variable 'accumulate' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/sim_util.cpp:1064:16: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/sim_util.cpp:1107:20: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/sim_util.cpp:1109:19: style: Local variable 'atomStart' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdlib/sim_util.cpp:1066:15: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdlib/sim_util.cpp:1109:19: note: Shadow variable
gromacs-2021.3/src/gromacs/mdlib/sim_util.cpp:1746:28: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdrun/mdmodules.h:189:30: style:inconclusive: Technically the member function 'gmx::MDModules::notifier' can be const. [functionConst]
gromacs-2021.3/src/gromacs/mdrun/mdmodules.cpp:192:37: note: Technically the member function 'gmx::MDModules::notifier' can be const.
gromacs-2021.3/src/gromacs/mdrun/mdmodules.h:189:30: note: Technically the member function 'gmx::MDModules::notifier' can be const.
gromacs-2021.3/src/gromacs/mdlib/vsite.cpp:2468:25: style: The scope of the variable 'vs_ind_end' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/vsite.cpp:1677:21: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdlib/vsite.cpp:2425:69: style:inconclusive: Function 'setVirtualSites' argument 1 names different: declaration 'ilist' definition 'ilists'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/vsite.cpp:215:58: note: Function 'setVirtualSites' argument 1 names different: declaration 'ilist' definition 'ilists'.
gromacs-2021.3/src/gromacs/mdlib/vsite.cpp:2425:69: note: Function 'setVirtualSites' argument 1 names different: declaration 'ilist' definition 'ilists'.
gromacs-2021.3/src/gromacs/mdlib/vsite.cpp:2683:81: style:inconclusive: Function 'setVirtualSites' argument 1 names different: declaration 'ilist' definition 'ilists'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/vsite.cpp:241:58: note: Function 'setVirtualSites' argument 1 names different: declaration 'ilist' definition 'ilists'.
gromacs-2021.3/src/gromacs/mdlib/vsite.cpp:2683:81: note: Function 'setVirtualSites' argument 1 names different: declaration 'ilist' definition 'ilists'.
gromacs-2021.3/src/gromacs/mdlib/vsite.cpp:2691:75: style:inconclusive: Function 'setVirtualSites' argument 1 names different: declaration 'ilist' definition 'ilists'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdlib/vsite.h:99:58: note: Function 'setVirtualSites' argument 1 names different: declaration 'ilist' definition 'ilists'.
gromacs-2021.3/src/gromacs/mdlib/vsite.cpp:2691:75: note: Function 'setVirtualSites' argument 1 names different: declaration 'ilist' definition 'ilists'.
gromacs-2021.3/src/gromacs/mdlib/vsite.cpp:183:18: style: Consider using std::fill or std::generate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdrun/mimic.cpp:146:23: style: The scope of the variable 't' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/mimic.cpp:149:23: style: The scope of the variable 'force_flags' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/mimic.cpp:156:12: style: The scope of the variable 'cycles' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/md.cpp:166:18: style: The scope of the variable 't' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/md.cpp:172:18: style: The scope of the variable 'force_flags' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/md.cpp:174:15: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/md.cpp:188:15: style: The scope of the variable 'cycles' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/md.cpp:192:15: style: The scope of the variable 'sbuf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/md.cpp:192:34: style: The scope of the variable 'sbuf2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/md.cpp:198:10: style: The scope of the variable 'bInteractiveMDstep' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/md.cpp:198:29: style: Variable 'bInteractiveMDstep' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:501:11: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:532:13: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:562:11: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:563:11: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:861:40: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:861:46: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:861:55: style: The scope of the variable 'ap' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:861:59: style: The scope of the variable 'bp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:861:63: style: The scope of the variable 'i0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:861:67: style: The scope of the variable 'i1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:1201:12: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:1258:9: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:1260:9: style: The scope of the variable 'exchange_partner' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:1340:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:615:60: style: Parameter 'dest' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/mdrun/replicaexchange.cpp:631:11: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdrun/rerun.cpp:182:23: style: The scope of the variable 'force_flags' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/rerun.cpp:192:12: style: The scope of the variable 'cycles' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:2341:10: style: Variable 'do_x' is reassigned a value before the old one has been used. [redundantAssignment]
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:1736:28: note: do_x is assigned
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:2341:10: note: do_x is overwritten
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:2342:10: style: Variable 'do_f' is reassigned a value before the old one has been used. [redundantAssignment]
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:1736:35: note: do_f is assigned
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:2342:10: note: do_f is overwritten
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:2799:35: style: Variable 'state_work_x[atom][d]' is reassigned a value before the old one has been used. [redundantAssignment]
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:2762:43: note: state_work_x[atom][d] is assigned
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:2799:35: note: state_work_x[atom][d] is overwritten
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:2799:35: style: Variable 'state_work_x[atom][d]' is reassigned a value before the old one has been used. [redundantAssignment]
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:2766:43: note: state_work_x[atom][d] is assigned
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:2799:35: note: state_work_x[atom][d] is overwritten
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:271:42: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:271:45: style: The scope of the variable 'gf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:1660:24: style: The scope of the variable 'mdof_flags' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/minimize.cpp:1081:18: style: Consider using std::fill or std::generate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdrun/simulationinput.cpp:52:61: style:inconclusive: Function 'applyGlobalSimulationState' argument 4 names different: declaration 'inputrec' definition 'inputRecord'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrun/simulationinput.h:118:61: note: Function 'applyGlobalSimulationState' argument 4 names different: declaration 'inputrec' definition 'inputRecord'.
gromacs-2021.3/src/gromacs/mdrun/simulationinput.cpp:52:61: note: Function 'applyGlobalSimulationState' argument 4 names different: declaration 'inputrec' definition 'inputRecord'.
gromacs-2021.3/src/gromacs/mdrun/simulationinput.cpp:53:61: style:inconclusive: Function 'applyGlobalSimulationState' argument 5 names different: declaration 'globalTopology' definition 'molecularTopology'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrun/simulationinput.h:119:61: note: Function 'applyGlobalSimulationState' argument 5 names different: declaration 'globalTopology' definition 'molecularTopology'.
gromacs-2021.3/src/gromacs/mdrun/simulationinput.cpp:53:61: note: Function 'applyGlobalSimulationState' argument 5 names different: declaration 'globalTopology' definition 'molecularTopology'.
gromacs-2021.3/src/gromacs/mdrun/simulationinput.cpp:63:53: style:inconclusive: Function 'applyLocalState' argument 5 names different: declaration 'ir' definition 'inputRecord'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrun/simulationinput.h:156:53: note: Function 'applyLocalState' argument 5 names different: declaration 'ir' definition 'inputRecord'.
gromacs-2021.3/src/gromacs/mdrun/simulationinput.cpp:63:53: note: Function 'applyLocalState' argument 5 names different: declaration 'ir' definition 'inputRecord'.
gromacs-2021.3/src/gromacs/mdrun/simulationinput.cpp:67:53: style:inconclusive: Function 'applyLocalState' argument 9 names different: declaration 'notifier' definition 'mdModulesNotifier'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrun/simulationinput.h:160:53: note: Function 'applyLocalState' argument 9 names different: declaration 'notifier' definition 'mdModulesNotifier'.
gromacs-2021.3/src/gromacs/mdrun/simulationinput.cpp:67:53: note: Function 'applyLocalState' argument 9 names different: declaration 'notifier' definition 'mdModulesNotifier'.
gromacs-2021.3/src/gromacs/mdrun/simulationinputhandle.cpp:148:86: style:inconclusive: Function 'operator=' argument 1 names different: declaration 'rhs' definition 'source'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrun/simulationinputhandle.h:143:67: note: Function 'operator=' argument 1 names different: declaration 'rhs' definition 'source'.
gromacs-2021.3/src/gromacs/mdrun/simulationinputhandle.cpp:148:86: note: Function 'operator=' argument 1 names different: declaration 'rhs' definition 'source'.
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:1158:13: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:1153:13: note: First condition
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:1158:13: note: Second condition
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:1164:17: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:1160:17: note: First condition
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:1164:17: note: Second condition
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:845:25: style: The scope of the variable 'w_dt' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:915:56: style:inconclusive: Function 'relax_shell_flexcon' argument 1 names different: declaration 'log' definition 'fplog'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrun/shellfc.h:94:62: note: Function 'relax_shell_flexcon' argument 1 names different: declaration 'log' definition 'fplog'.
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:915:56: note: Function 'relax_shell_flexcon' argument 1 names different: declaration 'log' definition 'fplog'.
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:930:56: style:inconclusive: Function 'relax_shell_flexcon' argument 16 names different: declaration 'x' definition 'xPadded'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrun/shellfc.h:109:62: note: Function 'relax_shell_flexcon' argument 16 names different: declaration 'x' definition 'xPadded'.
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:930:56: note: Function 'relax_shell_flexcon' argument 16 names different: declaration 'x' definition 'xPadded'.
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:931:56: style:inconclusive: Function 'relax_shell_flexcon' argument 17 names different: declaration 'v' definition 'vPadded'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrun/shellfc.h:110:62: note: Function 'relax_shell_flexcon' argument 17 names different: declaration 'v' definition 'vPadded'.
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:931:56: note: Function 'relax_shell_flexcon' argument 17 names different: declaration 'v' definition 'vPadded'.
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:1225:47: style:inconclusive: Function 'done_shellfc' argument 2 names different: declaration 'shellfc' definition 'shfc'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrun/shellfc.h:128:47: note: Function 'done_shellfc' argument 2 names different: declaration 'shellfc' definition 'shfc'.
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:1225:47: note: Function 'done_shellfc' argument 2 names different: declaration 'shellfc' definition 'shfc'.
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:330:23: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:266:10: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:330:23: note: Shadow variable
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:157:52: performance:inconclusive: Function parameter 'v' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:304:16: error: Uninitialized struct member: shfc.numForceEvaluations [uninitStructMember]
gromacs-2021.3/src/gromacs/mdrun/shellfc.cpp:304:16: error: Uninitialized struct member: shfc.numConvergedIterations [uninitStructMember]
gromacs-2021.3/src/gromacs/mdrun/simulatorbuilder.h:295:5: style: Class 'IonSwapping' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/mdrun/simulatorbuilder.h:330:5: style: Class 'BoxDeformationHandle' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/mdrunutility/tests/threadaffinity.cpp:54:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdrunutility/printtime.cpp:58:12: style: The scope of the variable 'dt' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrunutility/printtime.cpp:58:16: style: The scope of the variable 'elapsed_seconds' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrunutility/tests/threadaffinity_mpi.cpp:62:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdrunutility/printtime.cpp:58:33: style: The scope of the variable 'time_per_step' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrunutility/printtime.cpp:110:32: style:inconclusive: Function 'print_date_and_time' argument 1 names different: declaration 'log' definition 'fplog'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrunutility/printtime.h:68:32: note: Function 'print_date_and_time' argument 1 names different: declaration 'log' definition 'fplog'.
gromacs-2021.3/src/gromacs/mdrunutility/printtime.cpp:110:32: note: Function 'print_date_and_time' argument 1 names different: declaration 'log' definition 'fplog'.
gromacs-2021.3/src/gromacs/mdrunutility/printtime.cpp:110:43: style:inconclusive: Function 'print_date_and_time' argument 2 names different: declaration 'rank' definition 'nodeid'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrunutility/printtime.h:68:41: note: Function 'print_date_and_time' argument 2 names different: declaration 'rank' definition 'nodeid'.
gromacs-2021.3/src/gromacs/mdrunutility/printtime.cpp:110:43: note: Function 'print_date_and_time' argument 2 names different: declaration 'rank' definition 'nodeid'.
gromacs-2021.3/src/gromacs/mdspan/tests/accessor_policy.cpp:58:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdrunutility/multisim.cpp:401:26: style: The comparison 'rank == 0' is always true. [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/mdrunutility/multisim.cpp:397:24: note: 'rank' is assigned value '0' here.
gromacs-2021.3/src/gromacs/mdrunutility/multisim.cpp:401:26: note: The comparison 'rank == 0' is always true.
gromacs-2021.3/src/gromacs/mdspan/tests/extensions.cpp:73:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdspan/tests/extents.cpp:159:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdspan/tests/layouts.cpp:135:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdrunutility/threadaffinity.cpp:360:35: style: Condition 'nthread_local>1' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/mdrunutility/threadaffinity.cpp:357:27: note: Assuming that condition 'nthread_local>1' is not redundant
gromacs-2021.3/src/gromacs/mdrunutility/threadaffinity.cpp:360:35: note: Condition 'nthread_local>1' is always true
gromacs-2021.3/src/gromacs/mdspan/tests/mdspan.cpp:281:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdrun/tpi.cpp:123:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/tpi.cpp:171:52: style: The scope of the variable 'V' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/tpi.cpp:180:40: style: The scope of the variable 'frame_step' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/tpi.cpp:181:50: style: The scope of the variable 'step' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/tpi.cpp:185:23: style: The scope of the variable 'ptr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/tpi.cpp:185:41: style: The scope of the variable 'leg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/tpi.cpp:191:51: style: The scope of the variable 'logV' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/tpi.cpp:191:57: style: The scope of the variable 'bUlogV' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/tpi.cpp:193:23: style: The scope of the variable 'tpid_leg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/tpi.cpp:586:14: style: Local variable 'x' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdrun/tpi.cpp:320:10: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdrun/tpi.cpp:586:14: note: Shadow variable
gromacs-2021.3/src/gromacs/mdrunutility/handlerestart.cpp:344:21: style: Local variable 'logFilename' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/mdrunutility/handlerestart.cpp:294:17: note: Shadowed declaration
gromacs-2021.3/src/gromacs/mdrunutility/handlerestart.cpp:344:21: note: Shadow variable
gromacs-2021.3/src/gromacs/mdtypes/checkpointdata.cpp:83:14: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/mdtypes/df_history.cpp:45:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdtypes/forcebuffers.h:99:31: style:inconclusive: Technically the member function 'gmx::ForceBuffersView::forceWithPadding' can be const. [functionConst]
gromacs-2021.3/src/gromacs/mdtypes/df_history.cpp:119:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdtypes/forcebuffers.h:116:31: style:inconclusive: Technically the member function 'gmx::ForceBuffersView::forceMtsCombinedWithPadding' can be const. [functionConst]
gromacs-2021.3/src/gromacs/mdtypes/iforceprovider.h:90:45: performance:inconclusive: Function parameter 'x' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/mdtypes/iforceprovider.h:113:26: style: Parameter 'ptr' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/mdtypes/interaction_const.h:115:9: style: Struct 'SoftCoreParameters' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/mdtypes/inputrec.cpp:90:10: portability: Using memset() on struct which contains a floating point number. [memsetClassFloat]
gromacs-2021.3/src/gromacs/mdtypes/inputrec.cpp:90:10: error: Using 'memset' on struct that contains a 'std::vector'. [memsetClass]
gromacs-2021.3/src/gromacs/mdtypes/inputrec.cpp:90:10: error: Using 'memset' on struct that contains a 'std::unique_ptr'. [memsetClass]
gromacs-2021.3/src/gromacs/mdtypes/inputrec.cpp:148:10: style: The scope of the variable 'g' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdtypes/inputrec.cpp:552:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdtypes/inputrec.cpp:552:12: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdtypes/inputrec.cpp:796:17: style: The scope of the variable 'infbuf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdtypes/tests/checkpointdata.cpp:463:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdtypes/tests/forcebuffers.cpp:58:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/mdtypes/state.cpp:78:14: warning: Member variable 'ekinstate_t::hasReadEkinState' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/mdtypes/state.cpp:312:5: performance: Variable 'lambda' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/src/gromacs/modularsimulator/simulatoralgorithm.h:324:5: style: Class 'ModularSimulatorAlgorithmBuilderHelper' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/modularsimulator/energydata.cpp:162:61: style:inconclusive: Function 'trajectoryWriterSetup' argument 1 names different: declaration 'mdoutf' definition 'outf'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/modularsimulator/energydata.h:405:44: note: Function 'trajectoryWriterSetup' argument 1 names different: declaration 'mdoutf' definition 'outf'.
gromacs-2021.3/src/gromacs/modularsimulator/energydata.cpp:162:61: note: Function 'trajectoryWriterSetup' argument 1 names different: declaration 'mdoutf' definition 'outf'.
gromacs-2021.3/src/gromacs/modularsimulator/energydata.cpp:167:36: style:inconclusive: Function 'setup' argument 1 names different: declaration 'mdoutf' definition 'outf'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/modularsimulator/energydata.h:228:28: note: Function 'setup' argument 1 names different: declaration 'mdoutf' definition 'outf'.
gromacs-2021.3/src/gromacs/modularsimulator/energydata.cpp:167:36: note: Function 'setup' argument 1 names different: declaration 'mdoutf' definition 'outf'.
gromacs-2021.3/src/gromacs/modularsimulator/freeenergyperturbationdata.h:82:20: style:inconclusive: Technically the member function 'gmx::FreeEnergyPerturbationData::lambdaView' can be const. [functionConst]
gromacs-2021.3/src/gromacs/modularsimulator/freeenergyperturbationdata.cpp:95:44: note: Technically the member function 'gmx::FreeEnergyPerturbationData::lambdaView' can be const.
gromacs-2021.3/src/gromacs/modularsimulator/freeenergyperturbationdata.h:82:20: note: Technically the member function 'gmx::FreeEnergyPerturbationData::lambdaView' can be const.
gromacs-2021.3/src/gromacs/modularsimulator/freeenergyperturbationdata.h:84:26: style:inconclusive: Technically the member function 'gmx::FreeEnergyPerturbationData::constLambdaView' can be const. [functionConst]
gromacs-2021.3/src/gromacs/modularsimulator/freeenergyperturbationdata.cpp:100:50: note: Technically the member function 'gmx::FreeEnergyPerturbationData::constLambdaView' can be const.
gromacs-2021.3/src/gromacs/modularsimulator/freeenergyperturbationdata.h:84:26: note: Technically the member function 'gmx::FreeEnergyPerturbationData::constLambdaView' can be const.
gromacs-2021.3/src/gromacs/modularsimulator/freeenergyperturbationdata.h:86:9: style:inconclusive: Technically the member function 'gmx::FreeEnergyPerturbationData::currentFEPState' can be const. [functionConst]
gromacs-2021.3/src/gromacs/modularsimulator/freeenergyperturbationdata.cpp:105:33: note: Technically the member function 'gmx::FreeEnergyPerturbationData::currentFEPState' can be const.
gromacs-2021.3/src/gromacs/modularsimulator/freeenergyperturbationdata.h:86:9: note: Technically the member function 'gmx::FreeEnergyPerturbationData::currentFEPState' can be const.
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1787:16: error:inconclusive: Using pointer to local variable 'stateGpu' that is out of scope. [invalidLifetime]
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1726:40: note: Raw pointer to smart pointer created here.
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1714:54: note: Variable created here.
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1787:16: note: Using pointer to local variable 'stateGpu' that is out of scope.
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1809:12: error:inconclusive: Using pointer to local variable 'stateGpu' that is out of scope. [invalidLifetime]
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1726:40: note: Raw pointer to smart pointer created here.
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1714:54: note: Variable created here.
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1809:12: note: Using pointer to local variable 'stateGpu' that is out of scope.
gromacs-2021.3/src/gromacs/modularsimulator/pmeloadbalancehelper.h:94:10: style:inconclusive: Technically the member function 'gmx::PmeLoadBalanceHelper::pmePrinting' can be const. [functionConst]
gromacs-2021.3/src/gromacs/modularsimulator/pmeloadbalancehelper.cpp:119:28: note: Technically the member function 'gmx::PmeLoadBalanceHelper::pmePrinting' can be const.
gromacs-2021.3/src/gromacs/modularsimulator/pmeloadbalancehelper.h:94:10: note: Technically the member function 'gmx::PmeLoadBalanceHelper::pmePrinting' can be const.
gromacs-2021.3/src/gromacs/modularsimulator/pmeloadbalancehelper.h:102:33: style:inconclusive: Technically the member function 'gmx::PmeLoadBalanceHelper::loadBalancingObject' can be const. [functionConst]
gromacs-2021.3/src/gromacs/modularsimulator/pmeloadbalancehelper.cpp:124:51: note: Technically the member function 'gmx::PmeLoadBalanceHelper::loadBalancingObject' can be const.
gromacs-2021.3/src/gromacs/modularsimulator/pmeloadbalancehelper.h:102:33: note: Technically the member function 'gmx::PmeLoadBalanceHelper::loadBalancingObject' can be const.
gromacs-2021.3/src/gromacs/nbnxm/pairlist.h:211:5: error: There is an unknown macro here somewhere. Configuration is required. If MSVC_DIAGNOSTIC_IGNORE is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:2029:5: performance: Variable 'libraryWorldCommunicator_' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:2030:5: performance: Variable 'simulationCommunicator_' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/src/gromacs/mdrun/runner.h:180:10: performance:inconclusive: Technically the member function 'gmx::Mdrunner::spawnThreads' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:386:16: note: Technically the member function 'gmx::Mdrunner::spawnThreads' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/mdrun/runner.h:180:10: note: Technically the member function 'gmx::Mdrunner::spawnThreads' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/modularsimulator/simulatoralgorithm.cpp:117:5: performance: Variable 'signalHelper_' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/src/gromacs/modularsimulator/simulatoralgorithm.h:298:51: style:inconclusive: Technically the member function 'gmx::GlobalCommunicationHelper::moveCheckBondedInteractionsCallback' can be const. [functionConst]
gromacs-2021.3/src/gromacs/modularsimulator/simulatoralgorithm.cpp:675:60: note: Technically the member function 'gmx::GlobalCommunicationHelper::moveCheckBondedInteractionsCallback' can be const.
gromacs-2021.3/src/gromacs/modularsimulator/simulatoralgorithm.h:298:51: note: Technically the member function 'gmx::GlobalCommunicationHelper::moveCheckBondedInteractionsCallback' can be const.
gromacs-2021.3/src/gromacs/modularsimulator/simulatoralgorithm.cpp:202:40: style: The scope of the variable 'sbuf2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/modularsimulator/simulatoralgorithm.cpp:148:9: performance: Prefer prefix ++/-- operators for non-primitive types. [postfixOperator]
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:601:12: style: The scope of the variable 'delta_t' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:2186:58: style:inconclusive: Function 'addPME' argument 1 names different: declaration 'pme_opt_' definition 'pme_opt'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1930:29: note: Function 'addPME' argument 1 names different: declaration 'pme_opt_' definition 'pme_opt'.
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:2186:58: note: Function 'addPME' argument 1 names different: declaration 'pme_opt_' definition 'pme_opt'.
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:2186:79: style:inconclusive: Function 'addPME' argument 2 names different: declaration 'pme_fft_opt_' definition 'pme_fft_opt'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1930:51: note: Function 'addPME' argument 2 names different: declaration 'pme_fft_opt_' definition 'pme_fft_opt'.
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:2186:79: note: Function 'addPME' argument 2 names different: declaration 'pme_fft_opt_' definition 'pme_fft_opt'.
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:2260:55: style:inconclusive: Function 'addNeighborList' argument 1 names different: declaration 'rebuildInterval' definition 'nstlist'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/mdrun/runner.h:541:42: note: Function 'addNeighborList' argument 1 names different: declaration 'rebuildInterval' definition 'nstlist'.
gromacs-2021.3/src/gromacs/mdrun/runner.cpp:2260:55: note: Function 'addNeighborList' argument 1 names different: declaration 'rebuildInterval' definition 'nstlist'.
gromacs-2021.3/src/gromacs/nbnxm/benchmark/bench_setup.cpp:257:13: style: Condition '!addedInstance' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/nbnxm/benchmark/bench_setup.cpp:246:30: note: Assignment 'addedInstance=false', assigned value is 0
gromacs-2021.3/src/gromacs/nbnxm/benchmark/bench_setup.cpp:257:13: note: Condition '!addedInstance' is always true
gromacs-2021.3/src/gromacs/modularsimulator/velocityscalingtemperaturecoupling.cpp:192:5: style: Class 'VRescaleTemperatureCoupling' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/nbnxm/gridset.cpp:95:10: warning: Member variable 'GridSet::numColumnsMax_' is not initialized in the constructor. [uninitMemberVar]
gromacs-2021.3/src/gromacs/nbnxm/grid.h:191:9: style: Struct 'Geometry' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/nbnxm/gridset.cpp:72:26: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/nbnxm/benchmark/bench_system.cpp:204:9: warning: Struct 'BenchmarkSystem' does not have a copy constructor which is recommended since it has dynamic memory/resource allocation(s). [noCopyConstructor]
gromacs-2021.3/src/gromacs/nbnxm/benchmark/bench_system.cpp:204:9: warning: Struct 'BenchmarkSystem' does not have a operator= which is recommended since it has dynamic memory/resource allocation(s). [noOperatorEq]
gromacs-2021.3/src/gromacs/nbnxm/benchmark/bench_system.cpp:204:9: warning: Struct 'BenchmarkSystem' does not have a destructor which is recommended since it has dynamic memory/resource allocation(s). [noDestructor]
gromacs-2021.3/src/gromacs/nbnxm/kernels_reference/kernel_gpu_ref.cpp:74:25: style: The scope of the variable 'ish3' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/nbnxm/kernels_reference/kernel_gpu_ref.cpp:75:25: style: The scope of the variable 'sci' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/nbnxm/kernels_reference/kernel_gpu_ref.cpp:76:25: style: The scope of the variable 'cj4_ind0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/nbnxm/kernels_reference/kernel_gpu_ref.cpp:76:35: style: The scope of the variable 'cj4_ind1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/nbnxm/kernels_reference/kernel_gpu_ref.cpp:61:54: style: Parameter 'shift_vec' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/nbnxm/kernels_reference/kernel_gpu_ref.cpp:115:18: style: Consider using std::fill algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/onlinehelp/tests/helpformat.cpp:78:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:94:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/nbnxm/opencl/nbnxm_ocl.cpp:783:9: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/gromacs/nbnxm/opencl/nbnxm_ocl.cpp:777:9: note: First condition
gromacs-2021.3/src/gromacs/nbnxm/opencl/nbnxm_ocl.cpp:783:9: note: Second condition
gromacs-2021.3/src/gromacs/onlinehelp/tests/helpwritercontext.cpp:94:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/onlinehelp/helptopic.cpp:147:31: style: Local variable 'title' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/onlinehelp/helptopic.cpp:140:77: note: Shadowed declaration
gromacs-2021.3/src/gromacs/onlinehelp/helptopic.cpp:147:31: note: Shadow variable
gromacs-2021.3/src/gromacs/onlinehelp/helptopic.cpp:162:27: style: Local variable 'title' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/onlinehelp/helptopic.cpp:140:77: note: Shadowed declaration
gromacs-2021.3/src/gromacs/onlinehelp/helptopic.cpp:162:27: note: Shadow variable
gromacs-2021.3/src/gromacs/onlinehelp/helptopic.cpp:185:27: style: Local variable 'title' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/onlinehelp/helptopic.cpp:140:77: note: Shadowed declaration
gromacs-2021.3/src/gromacs/onlinehelp/helptopic.cpp:185:27: note: Shadow variable
gromacs-2021.3/src/gromacs/options/behaviorcollection.h:90:10: style:inconclusive: Technically the member function 'gmx::OptionsBehaviorCollection::optionsFinished' can be const. [functionConst]
gromacs-2021.3/src/gromacs/options/behaviorcollection.cpp:72:33: note: Technically the member function 'gmx::OptionsBehaviorCollection::optionsFinished' can be const.
gromacs-2021.3/src/gromacs/options/behaviorcollection.h:90:10: note: Technically the member function 'gmx::OptionsBehaviorCollection::optionsFinished' can be const.
gromacs-2021.3/src/gromacs/options/optionsvisitor.cpp:60:55: style: Parameter 'optionInfo' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/options/tests/abstractoptionstorage.cpp:163:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/options/tests/filenameoption.cpp:77:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/options/tests/filenameoptionmanager.cpp:82:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/options/options.cpp:125:9: style: Consider using std::find_if algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/options/tests/optionsassigner.cpp:84:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/options/tests/repeatingsection.cpp:66:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/options/tests/timeunitmanager.cpp:72:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/options/tests/treesupport.cpp:105:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/onlinehelp/helpwritercontext.h:264:10: performance:inconclusive: Technically the member function 'gmx::HelpWriterContext::writeOptionListStart' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/onlinehelp/helpwritercontext.cpp:601:25: note: Technically the member function 'gmx::HelpWriterContext::writeOptionListStart' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/onlinehelp/helpwritercontext.h:264:10: note: Technically the member function 'gmx::HelpWriterContext::writeOptionListStart' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/onlinehelp/helpwritercontext.h:286:10: performance:inconclusive: Technically the member function 'gmx::HelpWriterContext::writeOptionListEnd' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/onlinehelp/helpwritercontext.cpp:659:25: note: Technically the member function 'gmx::HelpWriterContext::writeOptionListEnd' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/onlinehelp/helpwritercontext.h:286:10: note: Technically the member function 'gmx::HelpWriterContext::writeOptionListEnd' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/options/optionsassigner.cpp:177:5: warning:inconclusive: Either the condition 'section==nullptr' is redundant or there is possible null pointer dereference: section. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/options/optionsassigner.cpp:172:17: note: Assuming that condition 'section==nullptr' is not redundant
gromacs-2021.3/src/gromacs/options/optionsassigner.cpp:177:5: note: Null pointer dereference
gromacs-2021.3/src/gromacs/options/basicoptions.h:417:27: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/options/basicoptions.cpp:293:19: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/options/basicoptions.cpp:385:19: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/options/treesupport.cpp:153:5: style: Class 'TreeCheckHelper' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/pbcutil/mshift.cpp:75:5: style: Class 'EdgesGenerator' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/pbcutil/mshift.cpp:106:16: style: The scope of the variable 'np' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/mshift.cpp:677:16: style: The scope of the variable 'nerror_tot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/mshift.cpp:408:72: style:inconclusive: Function 'mk_graph' argument 3 names different: declaration 'shiftAtomEnd' definition 'at_end'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/pbcutil/mshift.h:112:49: note: Function 'mk_graph' argument 3 names different: declaration 'shiftAtomEnd' definition 'at_end'.
gromacs-2021.3/src/gromacs/pbcutil/mshift.cpp:408:72: note: Function 'mk_graph' argument 3 names different: declaration 'shiftAtomEnd' definition 'at_end'.
gromacs-2021.3/src/gromacs/pbcutil/mshift.cpp:777:13: style: Local variable 'npbcdim' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/pbcutil/mshift.cpp:678:16: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pbcutil/mshift.cpp:777:13: note: Shadow variable
gromacs-2021.3/src/gromacs/pbcutil/tests/com.cpp:190:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/pbcutil/tests/mshift.cpp:121:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/pbcutil/rmpbc.cpp:170:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/rmpbc.cpp:216:14: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/tests/pbcenums.cpp:61:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/pbcutil/rmpbc.cpp:237:14: style: The scope of the variable 'gr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/pbc.cpp:1070:21: style: The scope of the variable 'd2trial' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/pbc.cpp:1390:18: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/pbc.cpp:314:17: style: Variable 'order' can be declared with const [constVariable]
gromacs-2021.3/src/gromacs/pulling/pull_internal.h:141:5: style: Struct 'pull_coord_work_t' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/pbcutil/pbcmethods.cpp:49:24: style: The scope of the variable 'j0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/output.cpp:401:19: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/pbcmethods.cpp:49:28: style: The scope of the variable 'j1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/output.cpp:402:12: style: The scope of the variable 'setname' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/pbcmethods.cpp:50:15: style: The scope of the variable 'imin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/output.cpp:402:21: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/pbcmethods.cpp:50:21: style: The scope of the variable 'jmin' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/pbcmethods.cpp:253:12: style: The scope of the variable 'mtot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/pbcmethods.cpp:389:10: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/pbcmethods.cpp:389:13: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pbcutil/pbcmethods.cpp:389:16: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/tests/pull.cpp:160:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/random/tests/exponentialdistribution.cpp:83:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/random/tests/gammadistribution.cpp:75:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/random/tests/normaldistribution.cpp:76:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/random/tabulatednormaldistribution.h:245:17: performance:inconclusive: Technically the member function 'TabulatedNormalDistribution < real , detail :: c_TabulatedNormalDistributionDefaultBits >::min' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/random/tabulatednormaldistribution.h:253:17: performance:inconclusive: Technically the member function 'TabulatedNormalDistribution < real , detail :: c_TabulatedNormalDistributionDefaultBits >::max' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/random/tests/tabulatednormaldistribution.cpp:75:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/random/tests/threefry.cpp:62:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/random/tests/uniformintdistribution.cpp:76:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/random/tests/uniformrealdistribution.cpp:74:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/restraint/manager.h:108:19: style:inconclusive: Technically the member function 'gmx::RestraintManager::countRestraints' can be const. [functionConst]
gromacs-2021.3/src/gromacs/restraint/manager.cpp:130:33: note: Technically the member function 'gmx::RestraintManager::countRestraints' can be const.
gromacs-2021.3/src/gromacs/restraint/manager.h:108:19: note: Technically the member function 'gmx::RestraintManager::countRestraints' can be const.
gromacs-2021.3/src/gromacs/restraint/manager.cpp:120:76: style:inconclusive: Function 'addToSpec' argument 1 names different: declaration 'restraint' definition 'puller'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/restraint/manager.h:118:62: note: Function 'addToSpec' argument 1 names different: declaration 'restraint' definition 'puller'.
gromacs-2021.3/src/gromacs/restraint/manager.cpp:120:76: note: Function 'addToSpec' argument 1 names different: declaration 'restraint' definition 'puller'.
gromacs-2021.3/src/gromacs/restraint/tests/manager.cpp:66:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/pulling/pull.cpp:1466:24: style: The scope of the variable 'pcrd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull.cpp:120:58: style:inconclusive: Function 'pull_group_work_t' argument 3 names different: declaration 'setPbcRefToPrevStepCOM' definition 'bSetPbcRefToPrevStepCOM'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/pulling/pull_internal.h:95:83: note: Function 'pull_group_work_t' argument 3 names different: declaration 'setPbcRefToPrevStepCOM' definition 'bSetPbcRefToPrevStepCOM'.
gromacs-2021.3/src/gromacs/pulling/pull.cpp:120:58: note: Function 'pull_group_work_t' argument 3 names different: declaration 'setPbcRefToPrevStepCOM' definition 'bSetPbcRefToPrevStepCOM'.
gromacs-2021.3/src/gromacs/pulling/pull.cpp:1073:25: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/pulling/pull.cpp:800:29: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pulling/pull.cpp:1073:25: note: Shadow variable
gromacs-2021.3/src/gromacs/pulling/pull.cpp:2090:22: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/pulling/pull.cpp:1384:38: warning: Either the condition 'coord_index<0' is redundant, otherwise there is negative array index -1. [negativeContainerIndex]
gromacs-2021.3/src/gromacs/pulling/pull.cpp:1376:21: note: Assuming that condition 'coord_index<0' is not redundant
gromacs-2021.3/src/gromacs/pulling/pull.cpp:1384:38: note: Negative array index
gromacs-2021.3/src/gromacs/restraint/restraintmdmodule.cpp:134:39: style: Redundant initialization for 'aLocal'. The initialized value is overwritten before it is read. [redundantInitialization]
gromacs-2021.3/src/gromacs/restraint/restraintmdmodule.cpp:131:23: note: aLocal is initialized
gromacs-2021.3/src/gromacs/restraint/restraintmdmodule.cpp:134:39: note: aLocal is overwritten
gromacs-2021.3/src/gromacs/restraint/restraintmdmodule.cpp:146:39: style: Redundant initialization for 'bLocal'. The initialized value is overwritten before it is read. [redundantInitialization]
gromacs-2021.3/src/gromacs/restraint/restraintmdmodule.cpp:145:23: note: bLocal is initialized
gromacs-2021.3/src/gromacs/restraint/restraintmdmodule.cpp:146:39: note: bLocal is overwritten
gromacs-2021.3/src/gromacs/restraint/restraintmdmodule.cpp:58:16: style: Consider using std::copy algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:504:18: style: Local variable 'cw' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:494:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:504:18: note: Shadow variable
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:505:18: style: Local variable 'sw' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:495:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:505:18: note: Shadow variable
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:637:30: style: Local variable 't' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:526:95: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:637:30: note: Shadow variable
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:646:30: style: Local variable 't' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:526:95: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:646:30: note: Shadow variable
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:676:26: style: Local variable 't' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:526:95: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:676:26: note: Shadow variable
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:686:26: style: Local variable 't' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:526:95: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pulling/pullutil.cpp:686:26: note: Shadow variable
gromacs-2021.3/src/gromacs/selection/centerofmass.cpp:58:12: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/centerofmass.cpp:200:16: style: The scope of the variable 'bChanged' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/centerofmass.cpp:201:16: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/centerofmass.cpp:201:19: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/centerofmass.cpp:201:22: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/centerofmass.cpp:201:26: style: The scope of the variable 'iter' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/centerofmass.cpp:529:57: style:inconclusive: Function 'gmx_calc_comg_f_blocka' argument 2 names different: declaration 'x' definition 'f'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/selection/centerofmass.h:168:57: note: Function 'gmx_calc_comg_f_blocka' argument 2 names different: declaration 'x' definition 'f'.
gromacs-2021.3/src/gromacs/selection/centerofmass.cpp:529:57: note: Function 'gmx_calc_comg_f_blocka' argument 2 names different: declaration 'x' definition 'f'.
gromacs-2021.3/src/gromacs/selection/centerofmass.cpp:529:102: style:inconclusive: Function 'gmx_calc_comg_f_blocka' argument 5 names different: declaration 'xout' definition 'fout'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/selection/centerofmass.h:168:102: note: Function 'gmx_calc_comg_f_blocka' argument 5 names different: declaration 'xout' definition 'fout'.
gromacs-2021.3/src/gromacs/selection/centerofmass.cpp:529:102: note: Function 'gmx_calc_comg_f_blocka' argument 5 names different: declaration 'xout' definition 'fout'.
gromacs-2021.3/src/gromacs/selection/selectioncollection_impl.h:216:10: performance:inconclusive: Technically the member function 'gmx::SelectionEvaluator::evaluate' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/selection/evaluate.cpp:423:26: note: Technically the member function 'gmx::SelectionEvaluator::evaluate' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/selection/selectioncollection_impl.h:216:10: note: Technically the member function 'gmx::SelectionEvaluator::evaluate' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/selection/selectioncollection_impl.h:220:10: performance:inconclusive: Technically the member function 'gmx::SelectionEvaluator::evaluateFinal' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/selection/evaluate.cpp:469:26: note: Technically the member function 'gmx::SelectionEvaluator::evaluateFinal' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/selection/selectioncollection_impl.h:220:10: note: Technically the member function 'gmx::SelectionEvaluator::evaluateFinal' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/selection/evaluate.cpp:423:56: style:inconclusive: Function 'evaluate' argument 1 names different: declaration 'sc' definition 'coll'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/selection/selectioncollection_impl.h:216:40: note: Function 'evaluate' argument 1 names different: declaration 'sc' definition 'coll'.
gromacs-2021.3/src/gromacs/selection/evaluate.cpp:423:56: note: Function 'evaluate' argument 1 names different: declaration 'sc' definition 'coll'.
gromacs-2021.3/src/gromacs/selection/evaluate.cpp:469:61: style:inconclusive: Function 'evaluateFinal' argument 1 names different: declaration 'sc' definition 'coll'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/selection/selectioncollection_impl.h:220:45: note: Function 'evaluateFinal' argument 1 names different: declaration 'sc' definition 'coll'.
gromacs-2021.3/src/gromacs/selection/evaluate.cpp:469:61: note: Function 'evaluateFinal' argument 1 names different: declaration 'sc' definition 'coll'.
gromacs-2021.3/src/gromacs/selection/evaluate.cpp:458:34: style: Local variable 'sel' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/selection/evaluate.cpp:430:33: note: Shadowed declaration
gromacs-2021.3/src/gromacs/selection/evaluate.cpp:458:34: note: Shadow variable
gromacs-2021.3/src/gromacs/selection/indexutil.cpp:421:15: style: Condition 'n<g->isize' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/selection/indexutil.cpp:412:15: note: n is assigned 'g->isize' here.
gromacs-2021.3/src/gromacs/selection/indexutil.cpp:421:15: note: Condition 'n<g->isize' is always false
gromacs-2021.3/src/gromacs/selection/nbsearch.cpp:414:5: performance: Variable 'cutoff_' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/src/gromacs/selection/nbsearch.h:113:5: style: Class 'AnalysisNeighborhoodPositions' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/selection/nbsearch.h:135:5: style: Class 'AnalysisNeighborhoodPositions' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/selection/indexutil.cpp:232:5: warning: Either the condition 'destName!=nullptr' is redundant or there is possible null pointer dereference: destName. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/selection/indexutil.cpp:239:18: note: Assuming that condition 'destName!=nullptr' is not redundant
gromacs-2021.3/src/gromacs/selection/indexutil.cpp:232:5: note: Null pointer dereference
scanner.cpp:2170:5: warning: Assignment of function parameter has no effect outside the function. Did you forget dereferencing it? [uselessAssignmentPtrArg]
gromacs-2021.3/src/gromacs/selection/indexutil.cpp:1362:15: style: The scope of the variable 'bi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:391:14: warning:inconclusive: Possible null pointer dereference: mat [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:385:20: note: Assignment 'mat=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:391:14: note: Null pointer dereference
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1039:9: warning:inconclusive: Possible null pointer dereference: LegendStr [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:952:30: note: Assignment 'LegendStr=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1039:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/selection/nbsearch.cpp:717:80: style:inconclusive: Function 'initCellRange' argument 2 names different: declaration 'cell' definition 'currCell'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/selection/nbsearch.cpp:232:52: note: Function 'initCellRange' argument 2 names different: declaration 'cell' definition 'currCell'.
gromacs-2021.3/src/gromacs/selection/nbsearch.cpp:717:80: note: Function 'initCellRange' argument 2 names different: declaration 'cell' definition 'currCell'.
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1330:17: warning:inconclusive: Possible null pointer dereference: rotated_str [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1300:26: note: Assignment 'rotated_str=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1330:17: note: Null pointer dereference
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1330:53: warning:inconclusive: Possible null pointer dereference: s [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1398:24: note: Assignment 'ref_s_1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1429:18: note: Calling function 'align_with_z', 1st argument 'ref_s_1' value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1330:53: note: Null pointer dereference
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1340:13: warning:inconclusive: Possible null pointer dereference: s [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1398:24: note: Assignment 'ref_s_1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1429:18: note: Calling function 'align_with_z', 1st argument 'ref_s_1' value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1340:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1340:23: warning:inconclusive: Possible null pointer dereference: rotated_str [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1300:26: note: Assignment 'rotated_str=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1340:23: note: Null pointer dereference
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1367:31: warning:inconclusive: Possible null pointer dereference: Ystr [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1399:24: note: Assignment 'act_s_1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1449:33: note: Calling function 'calc_correl_matrix', 2nd argument 'act_s_1' value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1367:31: note: Null pointer dereference
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1367:44: warning:inconclusive: Possible null pointer dereference: Xstr [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1398:24: note: Assignment 'ref_s_1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1449:24: note: Calling function 'calc_correl_matrix', 1st argument 'ref_s_1' value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1367:44: note: Null pointer dereference
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1383:13: warning:inconclusive: Possible null pointer dereference: str [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1398:24: note: Assignment 'ref_s_1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1444:22: note: Calling function 'weigh_coords', 1st argument 'ref_s_1' value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1383:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1413:29: warning:inconclusive: Possible null pointer dereference: ref_s_1 [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1398:24: note: Assignment 'ref_s_1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1413:29: note: Null pointer dereference
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1414:29: warning:inconclusive: Possible null pointer dereference: act_s_1 [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1399:24: note: Assignment 'act_s_1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1414:29: note: Null pointer dereference
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1437:9: warning:inconclusive: Possible null pointer dereference: ref_s_1 [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1398:24: note: Assignment 'ref_s_1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1437:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1438:9: warning:inconclusive: Possible null pointer dereference: act_s_1 [nullPointer]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1399:24: note: Assignment 'act_s_1=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1438:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:451:14: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:451:17: style: The scope of the variable 'islab' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:451:24: style: The scope of the variable 'nslabs' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:452:14: style: The scope of the variable 'count' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:948:18: style: The scope of the variable 'nsets' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:949:18: style: The scope of the variable 'setname' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:950:18: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:950:27: style: The scope of the variable 'buf2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1110:18: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1964:10: style: The scope of the variable 'count' can be reduced. [variableScope]
scanner.cpp:1160:11: style: Condition '!yyg->yy_did_buffer_switch_on_eof' is always true [knownConditionTrueFalse]
scanner.cpp:1139:40: note: Assignment 'yyg->yy_did_buffer_switch_on_eof=0', assigned value is 0
scanner.cpp:1160:11: note: Condition '!yyg->yy_did_buffer_switch_on_eof' is always true
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1964:17: style: The scope of the variable 'ii' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1964:21: style: The scope of the variable 'iigrp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:2219:14: style: The scope of the variable 'count' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:2219:21: style: The scope of the variable 'iigrp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:3382:35: style: The scope of the variable 'xdum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:3387:21: style: The scope of the variable 't_start' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/selectionoptionmanager.cpp:237:69: style:inconclusive: Function 'SelectionOptionManager' argument 1 names different: declaration 'selections' definition 'collection'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/selection/selectionoptionmanager.h:90:58: note: Function 'SelectionOptionManager' argument 1 names different: declaration 'selections' definition 'collection'.
gromacs-2021.3/src/gromacs/selection/selectionoptionmanager.cpp:237:69: note: Function 'SelectionOptionManager' argument 1 names different: declaration 'selections' definition 'collection'.
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:513:30: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:451:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:513:30: note: Shadow variable
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:520:30: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:451:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:520:30: note: Shadow variable
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:568:30: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:451:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:568:30: note: Shadow variable
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:585:30: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:451:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:585:30: note: Shadow variable
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1302:12: style: Local variable 'angle' shadows outer function [shadowFunction]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:2620:13: note: Shadowed declaration
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1302:12: note: Shadow variable
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:1253:12: style: Variable 'tmp' can be declared with const [constVariable]
gromacs-2021.3/src/gromacs/selection/selmethod.cpp:322:30: style: Local variable 'param' shadows outer argument [shadowArgument]
gromacs-2021.3/src/gromacs/selection/selmethod.cpp:135:65: note: Shadowed declaration
gromacs-2021.3/src/gromacs/selection/selmethod.cpp:322:30: note: Shadow variable
gromacs-2021.3/src/gromacs/selection/selvalue.cpp:80:9: style: The scope of the variable 'i' can be reduced. [variableScope]
scanner.cpp:1295:3: style: Redundant initialization for 'c'. The initialized value is overwritten before it is read. [redundantInitialization]
scanner.cpp:1295:3: note: c is initialized
scanner.cpp:1295:3: note: c is overwritten
gromacs-2021.3/src/gromacs/selection/position.cpp:223:49: style:inconclusive: Function 'gmx_ana_pos_set_nr' argument 2 names different: declaration 'n' definition 'nr'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/selection/position.h:98:49: note: Function 'gmx_ana_pos_set_nr' argument 2 names different: declaration 'n' definition 'nr'.
gromacs-2021.3/src/gromacs/selection/position.cpp:223:49: note: Function 'gmx_ana_pos_set_nr' argument 2 names different: declaration 'n' definition 'nr'.
scanner.cpp:1254:23: style: Checking if unsigned expression 'num_to_read' is less than zero. [unsignedLessThanZero]
gromacs-2021.3/src/gromacs/pulling/pull_rotation.cpp:451:31: style: Variable 'nslabs' is assigned a value that is never used. [unreadVariable]
scanner.cpp:1267:19: style: Checking if unsigned expression 'new_size' is less than zero. [unsignedLessThanZero]
scanner.cpp:1372:59: style:inconclusive: Function 'yy_try_NUL_trans' argument 1 names different: declaration 'current_state' definition 'yy_current_state'. [funcArgNamesDifferent]
scanner.cpp:357:54: note: Function 'yy_try_NUL_trans' argument 1 names different: declaration 'current_state' definition 'yy_current_state'.
scanner.cpp:1372:59: note: Function 'yy_try_NUL_trans' argument 1 names different: declaration 'current_state' definition 'yy_current_state'.
scanner.cpp:1399:40: style:inconclusive: Function 'yyunput' argument 2 names different: declaration 'buf_ptr' definition 'yy_bp'. [funcArgNamesDifferent]
scanner.cpp:687:38: note: Function 'yyunput' argument 2 names different: declaration 'buf_ptr' definition 'yy_bp'.
scanner.cpp:1399:40: note: Function 'yyunput' argument 2 names different: declaration 'buf_ptr' definition 'yy_bp'.
scanner.cpp:1829:57: style:inconclusive: Function '_gmx_sel_yy_scan_string' argument 1 names different: declaration 'yy_str' definition 'yystr'. [funcArgNamesDifferent]
scanner.cpp:316:56: note: Function '_gmx_sel_yy_scan_string' argument 1 names different: declaration 'yy_str' definition 'yystr'.
scanner.cpp:1829:57: note: Function '_gmx_sel_yy_scan_string' argument 1 names different: declaration 'yy_str' definition 'yystr'.
scanner.cpp:1842:57: style:inconclusive: Function '_gmx_sel_yy_scan_bytes' argument 1 names different: declaration 'bytes' definition 'yybytes'. [funcArgNamesDifferent]
scanner.cpp:317:55: note: Function '_gmx_sel_yy_scan_bytes' argument 1 names different: declaration 'bytes' definition 'yybytes'.
scanner.cpp:1842:57: note: Function '_gmx_sel_yy_scan_bytes' argument 1 names different: declaration 'bytes' definition 'yybytes'.
scanner.cpp:1842:77: style:inconclusive: Function '_gmx_sel_yy_scan_bytes' argument 2 names different: declaration 'len' definition '_yybytes_len'. [funcArgNamesDifferent]
scanner.cpp:317:71: note: Function '_gmx_sel_yy_scan_bytes' argument 2 names different: declaration 'len' definition '_yybytes_len'.
scanner.cpp:1842:77: note: Function '_gmx_sel_yy_scan_bytes' argument 2 names different: declaration 'len' definition '_yybytes_len'.
gromacs-2021.3/src/gromacs/selection/selection.cpp:341:15: style: Condition 'n<p.m.mapb.nr' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/selection/selection.cpp:332:15: note: n is assigned 'p.m.mapb.nr' here.
gromacs-2021.3/src/gromacs/selection/selection.cpp:341:15: note: Condition 'n<p.m.mapb.nr' is always false
gromacs-2021.3/src/gromacs/selection/tests/indexutil.cpp:72:1: error: syntax error [syntaxError]
scanner.cpp:2039:33: style:inconclusive: Function '_gmx_sel_yyset_debug' argument 1 names different: declaration 'debug_flag' definition '_bdebug'. [funcArgNamesDifferent]
scanner.cpp:647:32: note: Function '_gmx_sel_yyset_debug' argument 1 names different: declaration 'debug_flag' definition '_bdebug'.
scanner.cpp:2039:33: note: Function '_gmx_sel_yyset_debug' argument 1 names different: declaration 'debug_flag' definition '_bdebug'.
gromacs-2021.3/src/gromacs/selection/tests/nbsearch.cpp:880:1: error: syntax error [syntaxError]
scanner.cpp:2054:35: style:inconclusive: Function '_gmx_sel_yylex_init' argument 1 names different: declaration 'scanner' definition 'ptr_yy_globals'. [funcArgNamesDifferent]
scanner.cpp:636:36: note: Function '_gmx_sel_yylex_init' argument 1 names different: declaration 'scanner' definition 'ptr_yy_globals'.
scanner.cpp:2054:35: note: Function '_gmx_sel_yylex_init' argument 1 names different: declaration 'scanner' definition 'ptr_yy_globals'.
gromacs-2021.3/src/gromacs/selection/tests/poscalc.cpp:351:1: error: syntax error [syntaxError]
scanner.cpp:2083:45: style:inconclusive: Function '_gmx_sel_yylex_init_extra' argument 1 names different: declaration 'user_defined' definition 'yy_user_defined'. [funcArgNamesDifferent]
scanner.cpp:638:46: note: Function '_gmx_sel_yylex_init_extra' argument 1 names different: declaration 'user_defined' definition 'yy_user_defined'.
scanner.cpp:2083:45: note: Function '_gmx_sel_yylex_init_extra' argument 1 names different: declaration 'user_defined' definition 'yy_user_defined'.
gromacs-2021.3/src/gromacs/selection/selection.cpp:94:16: warning: Either the condition 'child' is redundant or there is possible null pointer dereference: child. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/selection/selection.cpp:114:13: note: Assuming that condition 'child' is not redundant
gromacs-2021.3/src/gromacs/selection/selection.cpp:94:16: note: Null pointer dereference
gromacs-2021.3/src/gromacs/selection/tests/selectioncollection.cpp:98:1: error: syntax error [syntaxError]
scanner.cpp:2083:71: style:inconclusive: Function '_gmx_sel_yylex_init_extra' argument 2 names different: declaration 'scanner' definition 'ptr_yy_globals'. [funcArgNamesDifferent]
scanner.cpp:638:69: note: Function '_gmx_sel_yylex_init_extra' argument 2 names different: declaration 'scanner' definition 'ptr_yy_globals'.
scanner.cpp:2083:71: note: Function '_gmx_sel_yylex_init_extra' argument 2 names different: declaration 'scanner' definition 'ptr_yy_globals'.
gromacs-2021.3/src/gromacs/selection/tests/selectionoption.cpp:108:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/simd/tests/scalar.cpp:73:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/simd/tests/scalar_math.cpp:76:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/simd/tests/scalar_util.cpp:80:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/selection/sm_insolidangle.cpp:391:35: style: The scope of the variable 'c' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/sm_insolidangle.cpp:429:32: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/sm_insolidangle.cpp:684:15: style: The scope of the variable 'c' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/poscalc.cpp:867:28: style: The scope of the variable 'bnr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/poscalc.cpp:868:21: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/sm_compare.cpp:511:27: style: The scope of the variable 'a' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/poscalc.cpp:868:24: style: The scope of the variable 'bi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/sm_compare.cpp:511:30: style: The scope of the variable 'b' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/sm_keywords.cpp:467:25: style: The scope of the variable 'val' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/poscalc.cpp:868:28: style: The scope of the variable 'bj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/sm_compare.cpp:512:27: style: The scope of the variable 'bAccept' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/sm_keywords.cpp:587:12: error: Uninitialized struct member: data.v [uninitStructMember]
gromacs-2021.3/src/gromacs/selection/poscalc.cpp:868:32: style: The scope of the variable 'bo' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/sm_compare.cpp:560:27: style: The scope of the variable 'bAccept' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/poscalc.cpp:1181:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/poscalc.cpp:1181:12: style: The scope of the variable 'bi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/poscalc.cpp:1181:16: style: The scope of the variable 'bj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/simd/support.cpp:286:23: style: Condition 'compiled==SimdType::X86_Avx512' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/simd/support.cpp:264:37: note: Assignment 'compiled=simdCompiled()', assigned value is 0
gromacs-2021.3/src/gromacs/simd/support.cpp:286:23: note: Condition 'compiled==SimdType::X86_Avx512' is always false
gromacs-2021.3/src/gromacs/simd/support.cpp:262:30: style:inconclusive: Function 'simdCheck' argument 1 names different: declaration 's' definition 'wanted'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/simd/support.h:99:25: note: Function 'simdCheck' argument 1 names different: declaration 's' definition 'wanted'.
gromacs-2021.3/src/gromacs/simd/support.cpp:262:30: note: Function 'simdCheck' argument 1 names different: declaration 's' definition 'wanted'.
gromacs-2021.3/src/gromacs/selection/selelem.cpp:519:18: warning: Either the condition 'free_func' is redundant or there is possible null pointer dereference: free_func. [nullPointerRedundantCheck]
gromacs-2021.3/src/gromacs/selection/selelem.cpp:545:13: note: Assuming that condition 'free_func' is not redundant
gromacs-2021.3/src/gromacs/selection/selelem.cpp:522:16: note: Assuming condition is false
gromacs-2021.3/src/gromacs/selection/selelem.cpp:519:18: note: Null pointer dereference
gromacs-2021.3/src/gromacs/selection/params.cpp:994:69: warning: Function '_gmx_sel_parse_params' argument order different: declaration 'params, nparam, param, root, scanner' definition 'pparams, nparam, params, root, scanner' [funcArgOrderDifferent]
gromacs-2021.3/src/gromacs/selection/parsetree.h:551:69: note: Function '_gmx_sel_parse_params' argument order different: declaration 'params, nparam, param, root, scanner' definition 'pparams, nparam, params, root, scanner'
gromacs-2021.3/src/gromacs/selection/params.cpp:994:69: note: Function '_gmx_sel_parse_params' argument order different: declaration 'params, nparam, param, root, scanner' definition 'pparams, nparam, params, root, scanner'
gromacs-2021.3/src/gromacs/selection/params.cpp:209:60: style: Parameter 'param' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/selection/tests/toputils.cpp:188:20: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:193:12: style: The scope of the variable 'yy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:193:16: style: The scope of the variable 'yx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:193:20: style: The scope of the variable 'xx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:193:24: style: The scope of the variable 'sx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:193:28: style: The scope of the variable 'sy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:193:32: style: The scope of the variable 'dy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:193:36: style: The scope of the variable 'chi2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:193:42: style: The scope of the variable 'chi2aa' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:193:50: style: The scope of the variable 'd2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:194:12: style: The scope of the variable 'ssxx' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:194:18: style: The scope of the variable 'ssyy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:194:24: style: The scope of the variable 'ssxy' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/selectioncollection.cpp:714:72: style:inconclusive: Function 'parseInteractive' argument 3 names different: declaration 'outputStream' definition 'statusStream'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/selection/selectioncollection.h:316:55: note: Function 'parseInteractive' argument 3 names different: declaration 'outputStream' definition 'statusStream'.
gromacs-2021.3/src/gromacs/selection/selectioncollection.cpp:714:72: note: Function 'parseInteractive' argument 3 names different: declaration 'outputStream' definition 'statusStream'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:195:12: style: The scope of the variable 'w' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/selectioncollection.cpp:891:47: style:inconclusive: Function 'printXvgrInfo' argument 1 names different: declaration 'fp' definition 'out'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/selection/selectioncollection.h:412:30: note: Function 'printXvgrInfo' argument 1 names different: declaration 'fp' definition 'out'.
gromacs-2021.3/src/gromacs/selection/selectioncollection.cpp:891:47: note: Function 'printXvgrInfo' argument 1 names different: declaration 'fp' definition 'out'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:195:15: style: The scope of the variable 'wtot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/selection/selectioncollection.cpp:497:9: style: Consider using std::any_of algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:195:21: style: The scope of the variable 'yx_nw' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:195:28: style: The scope of the variable 'sy_nw' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/tests/splinetable.cpp:82:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:195:35: style: The scope of the variable 'sx_nw' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:195:42: style: The scope of the variable 'yy_nw' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:195:49: style: The scope of the variable 'xx_nw' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:195:56: style: The scope of the variable 'dx2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:195:61: style: The scope of the variable 'dy2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:502:36: style: The scope of the variable 'ok' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:73:39: style:inconclusive: Function 'gmx_stats_get_npoints' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:201:39: note: Function 'gmx_stats_get_npoints' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:73:39: note: Function 'gmx_stats_get_npoints' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:82:33: style:inconclusive: Function 'gmx_stats_free' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:94:33: note: Function 'gmx_stats_free' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:82:33: note: Function 'gmx_stats_free' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:93:37: style:inconclusive: Function 'gmx_stats_add_point' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:114:37: note: Function 'gmx_stats_add_point' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:93:37: note: Function 'gmx_stats_add_point' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/tables/splineutil.cpp:327:22: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/tables/splineutil.cpp:318:25: note: Shadowed declaration
gromacs-2021.3/src/gromacs/tables/splineutil.cpp:327:22: note: Shadow variable
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:129:37: style:inconclusive: Function 'gmx_stats_get_point' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:149:37: note: Function 'gmx_stats_get_point' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:129:37: note: Function 'gmx_stats_get_point' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:176:38: style:inconclusive: Function 'gmx_stats_add_points' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:128:38: note: Function 'gmx_stats_add_points' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:176:38: note: Function 'gmx_stats_add_points' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:320:34: style:inconclusive: Function 'gmx_stats_get_ab' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:164:34: note: Function 'gmx_stats_get_ab' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:320:34: note: Function 'gmx_stats_get_ab' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:357:33: style:inconclusive: Function 'gmx_stats_get_a' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:177:33: note: Function 'gmx_stats_get_a' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:357:33: note: Function 'gmx_stats_get_a' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:386:39: style:inconclusive: Function 'gmx_stats_get_average' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:209:39: note: Function 'gmx_stats_get_average' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:386:39: note: Function 'gmx_stats_get_average' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:401:35: style:inconclusive: Function 'gmx_stats_get_ase' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:235:35: note: Function 'gmx_stats_get_ase' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:401:35: note: Function 'gmx_stats_get_ase' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:427:37: style:inconclusive: Function 'gmx_stats_get_sigma' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:217:37: note: Function 'gmx_stats_get_sigma' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:427:37: note: Function 'gmx_stats_get_sigma' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:442:37: style:inconclusive: Function 'gmx_stats_get_error' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:225:37: note: Function 'gmx_stats_get_error' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:442:37: note: Function 'gmx_stats_get_error' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:457:42: style:inconclusive: Function 'gmx_stats_get_corr_coeff' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:185:42: note: Function 'gmx_stats_get_corr_coeff' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:457:42: note: Function 'gmx_stats_get_corr_coeff' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:472:36: style:inconclusive: Function 'gmx_stats_get_rmsd' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:193:36: note: Function 'gmx_stats_get_rmsd' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:472:36: note: Function 'gmx_stats_get_rmsd' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:487:35: style:inconclusive: Function 'gmx_stats_dump_xy' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:243:35: note: Function 'gmx_stats_dump_xy' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:487:35: note: Function 'gmx_stats_dump_xy' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:499:43: style:inconclusive: Function 'gmx_stats_remove_outliers' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:103:43: note: Function 'gmx_stats_remove_outliers' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:499:43: note: Function 'gmx_stats_remove_outliers' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:540:42: style:inconclusive: Function 'gmx_stats_make_histogram' argument 1 names different: declaration 'stats' definition 'gstats'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:266:42: note: Function 'gmx_stats_make_histogram' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:540:42: note: Function 'gmx_stats_make_histogram' argument 1 names different: declaration 'stats' definition 'gstats'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:540:70: style:inconclusive: Function 'gmx_stats_make_histogram' argument 3 names different: declaration 'nbins' definition 'nb'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/statistics/statistics.h:268:42: note: Function 'gmx_stats_make_histogram' argument 3 names different: declaration 'nbins' definition 'nb'.
gromacs-2021.3/src/gromacs/statistics/statistics.cpp:540:70: note: Function 'gmx_stats_make_histogram' argument 3 names different: declaration 'nbins' definition 'nb'.
gromacs-2021.3/src/gromacs/taskassignment/reportgpuusage.cpp:87:55: style:inconclusive: Function 'reportGpuUsage' argument 4 names different: declaration 'numPpRanks' definition 'numRanks'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/taskassignment/reportgpuusage.h:83:55: note: Function 'reportGpuUsage' argument 4 names different: declaration 'numPpRanks' definition 'numRanks'.
gromacs-2021.3/src/gromacs/taskassignment/reportgpuusage.cpp:87:55: note: Function 'reportGpuUsage' argument 4 names different: declaration 'numPpRanks' definition 'numRanks'.
gromacs-2021.3/src/gromacs/taskassignment/tests/usergpuids.cpp:124:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/taskassignment/findallgputasks.cpp:200:20: style: Consider using std::copy algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/timing/cyclecounter.cpp:189:5: style: Statements following return, break, continue, goto or throw will never be executed. [unreachableCode]
gromacs-2021.3/src/gromacs/taskassignment/taskassignment.h:195:5: style: Class 'GpuTaskAssignments' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
* yacc.c:1257  *:201:10: style: C-style pointer casting [cstyleCast]
* yacc.c:1257  *:369:7: style:inconclusive: Statements following return, break, continue, goto or throw will never be executed. [unreachableCode]
* yacc.c:1257  *:209:28: style:inconclusive: Function '_gmx_sel_yypstate_delete' argument 1 names different: declaration 'ps' definition 'yyps'. [funcArgNamesDifferent]
* yacc.c:355  *:138:51: note: Function '_gmx_sel_yypstate_delete' argument 1 names different: declaration 'ps' definition 'yyps'.
* yacc.c:1257  *:209:28: note: Function '_gmx_sel_yypstate_delete' argument 1 names different: declaration 'ps' definition 'yyps'.
* yacc.c:1257  *:241:25: style:inconclusive: Function '_gmx_sel_yypush_parse' argument 1 names different: declaration 'ps' definition 'yyps'. [funcArgNamesDifferent]
* yacc.c:355  *:135:47: note: Function '_gmx_sel_yypush_parse' argument 1 names different: declaration 'ps' definition 'yyps'.
* yacc.c:1257  *:241:25: note: Function '_gmx_sel_yypush_parse' argument 1 names different: declaration 'ps' definition 'yyps'.
* yacc.c:1257  *:241:35: style:inconclusive: Function '_gmx_sel_yypush_parse' argument 2 names different: declaration 'pushed_char' definition 'yypushed_char'. [funcArgNamesDifferent]
* yacc.c:355  *:135:55: note: Function '_gmx_sel_yypush_parse' argument 2 names different: declaration 'pushed_char' definition 'yypushed_char'.
* yacc.c:1257  *:241:35: note: Function '_gmx_sel_yypush_parse' argument 2 names different: declaration 'pushed_char' definition 'yypushed_char'.
gromacs-2021.3/src/gromacs/taskassignment/taskassignment.cpp:145:21: style: Consider using std::any_of algorithm instead of a raw loop. [useStlAlgorithm]
* yacc.c:1257  *:241:65: style:inconclusive: Function '_gmx_sel_yypush_parse' argument 3 names different: declaration 'pushed_val' definition 'yypushed_val'. [funcArgNamesDifferent]
* yacc.c:355  *:135:83: note: Function '_gmx_sel_yypush_parse' argument 3 names different: declaration 'pushed_val' definition 'yypushed_val'.
* yacc.c:1257  *:241:65: note: Function '_gmx_sel_yypush_parse' argument 3 names different: declaration 'pushed_val' definition 'yypushed_val'.
gromacs-2021.3/src/gromacs/taskassignment/taskassignment.cpp:190:31: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
* yacc.c:1257  *:241:88: style:inconclusive: Function '_gmx_sel_yypush_parse' argument 4 names different: declaration 'pushed_loc' definition 'yypushed_loc'. [funcArgNamesDifferent]
* yacc.c:355  *:135:104: note: Function '_gmx_sel_yypush_parse' argument 4 names different: declaration 'pushed_loc' definition 'yypushed_loc'.
* yacc.c:1257  *:241:88: note: Function '_gmx_sel_yypush_parse' argument 4 names different: declaration 'pushed_loc' definition 'yypushed_loc'.
* yacc.c:358  *:709:55: style: Parameter 'yytop' can be declared with const [constParameter]
* yacc.c:1257  *:241:88: style: Parameter 'yypushed_loc' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/taskassignment/decidegpuusage.cpp:378:19: warning: Identical condition 'pmeTarget==TaskTarget::Cpu', second condition is always false [identicalConditionAfterEarlyExit]
gromacs-2021.3/src/gromacs/taskassignment/decidegpuusage.cpp:337:19: note: If condition 'pmeTarget==TaskTarget::Cpu' is true, the function will return/exit
gromacs-2021.3/src/gromacs/taskassignment/decidegpuusage.cpp:378:19: note: Testing identical condition 'pmeTarget==TaskTarget::Cpu'
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:171:5: style: Struct 'swap_group' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:128:12: style: The scope of the variable 'br' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:128:16: style: The scope of the variable 'br2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:128:21: style: The scope of the variable 'br4' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:128:26: style: The scope of the variable 'r6' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:128:30: style: The scope of the variable 'factor' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:968:13: warning:inconclusive: Possible null pointer dereference: nGroup [nullPointer]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:948:19: note: Assignment 'nGroup=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:968:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:153:14: style: The scope of the variable 'v_r0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:974:13: warning:inconclusive: Possible null pointer dereference: nGroup [nullPointer]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:948:19: note: Assignment 'nGroup=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:974:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:154:14: style: The scope of the variable 'x_r0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1307:27: warning:inconclusive: Possible null pointer dereference: x_pbc [nullPointer]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1252:24: note: Assignment 'x_pbc=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1307:27: note: Null pointer dereference
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:402:15: style: The scope of the variable 'nn0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1380:21: warning:inconclusive: Possible null pointer dereference: indIons [nullPointer]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1407:23: note: Assignment 'indAnions=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1438:24: note: Calling function 'copyIndicesToGroup', 1st argument 'indAnions' value is 0
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1380:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:448:26: style: The scope of the variable 'b' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:876:22: style: The scope of the variable 'g' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:586:14: style: The scope of the variable 'start' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/timing/wallcycle.cpp:699:12: style: The scope of the variable 'nnodes_str' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:927:16: style: The scope of the variable 'g' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:586:21: style: The scope of the variable 'end' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/timing/wallcycle.cpp:700:12: style: The scope of the variable 'nthreads_str' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1469:22: style: The scope of the variable 'gs' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:782:20: style: The scope of the variable 'p' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/timing/wallcycle.cpp:701:12: style: The scope of the variable 'ncalls_str' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1822:16: style: The scope of the variable 'g' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:784:12: style: The scope of the variable 'r' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/timing/wallcycle.cpp:702:12: style: The scope of the variable 'wallt' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1939:19: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:784:15: style: The scope of the variable 'r2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/timing/wallcycle.cpp:811:48: style: The scope of the variable 'tot_cpu_overlap' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1939:22: style: The scope of the variable 'ic' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:784:19: style: The scope of the variable 'r6' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/timing/wallcycle.cpp:811:65: style: The scope of the variable 'gpu_cpu_ratio' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1939:30: style: The scope of the variable 'nswaps' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:784:23: style: The scope of the variable 'rc2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/timing/wallcycle.cpp:814:17: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/convert_tpr.cpp:395:16: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1940:19: style: The scope of the variable 'thisC' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:785:18: style: The scope of the variable 'Vtab' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/timing/wallcycle.cpp:954:23: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/timing/wallcycle.cpp:813:17: note: Shadowed declaration
gromacs-2021.3/src/gromacs/timing/wallcycle.cpp:954:23: note: Shadow variable
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1940:26: style: The scope of the variable 'otherC' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:785:24: style: The scope of the variable 'Ftab' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1943:19: style: The scope of the variable 'isol' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:1119:17: style: The scope of the variable 'vdwtype' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:1943:25: style: The scope of the variable 'iion' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:1382:19: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:1247:33: style:inconclusive: Function 'make_tables' argument 1 names different: declaration 'fp' definition 'out'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/tables/forcetable.h:136:33: note: Function 'make_tables' argument 1 names different: declaration 'fp' definition 'out'.
gromacs-2021.3/src/gromacs/tables/forcetable.cpp:1247:33: note: Function 'make_tables' argument 1 names different: declaration 'fp' definition 'out'.
gromacs-2021.3/src/gromacs/swap/swapcoords.cpp:950:19: style: Variable 'ind' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/tools/check.cpp:435:29: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/check.cpp:445:16: style: The scope of the variable 'atom_vdw' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/dump.cpp:565:13: warning:inconclusive: Possible null pointer dereference: full [nullPointer]
gromacs-2021.3/src/gromacs/tools/dump.cpp:574:17: warning:inconclusive: Possible null pointer dereference: full [nullPointer]
gromacs-2021.3/src/gromacs/tools/dump.cpp:575:17: warning:inconclusive: Possible null pointer dereference: full [nullPointer]
gromacs-2021.3/src/gromacs/tools/dump.cpp:99:16: style: The scope of the variable 'gp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/dump.cpp:100:16: style: The scope of the variable 'indent' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/dump.cpp:100:24: style: The scope of the variable 'atot' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/dump.cpp:293:15: style: The scope of the variable 'indent' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/dump.cpp:554:43: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:386:39: style: Condition 'c==' '' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:373:15: note: Assuming that condition 'c!=' '' is not redundant
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:386:39: note: Condition 'c==' '' is always true
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:457:58: style: Condition 'c==' '' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:444:15: note: Assuming that condition 'c!=' '' is not redundant
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:457:58: note: Condition 'c==' '' is always true
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:1319:21: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:71:18: style: The scope of the variable 'i2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:272:11: style: The scope of the variable 's' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:272:15: style: The scope of the variable 'sp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:273:11: style: The scope of the variable 'c' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:503:23: style: The scope of the variable 'resnr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:644:11: style: The scope of the variable 'name' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:757:24: style: The scope of the variable 'name' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:758:13: style: The scope of the variable 'resind' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:759:10: style: The scope of the variable 'a' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:798:10: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:800:13: style: The scope of the variable 'a' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/mk_angndx.cpp:153:22: style: The scope of the variable 'ftype' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:921:21: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/mk_angndx.cpp:216:24: style: The scope of the variable 'ftype' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:922:24: style: The scope of the variable 'nr1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:1095:45: style: The scope of the variable 'resind' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:1138:21: style: The scope of the variable 'atnames' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:1138:31: style: The scope of the variable 'ostring' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:1535:23: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/make_ndx.cpp:1540:31: style: The scope of the variable 'block2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/tests/dump.cpp:85:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/tools/tests/helpwriting.cpp:71:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/tools/tests/report_methods.cpp:102:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/tools/tests/trjconv.cpp:86:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/tools/pme_error.cpp:1036:17: portability: %g in format string (no. 2) requires 'double' but the argument type is 'int {aka signed int}'. [invalidPrintfArgType_float]
gromacs-2021.3/src/gromacs/tools/pme_error.cpp:125:10: style: The scope of the variable 'nrq_mol' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/eneconv.cpp:74:18: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/eneconv.cpp:74:21: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/eneconv.cpp:229:14: style: The scope of the variable 'inputstring' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/eneconv.cpp:692:29: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/tools/eneconv.cpp:465:46: note: Shadowed declaration
gromacs-2021.3/src/gromacs/tools/eneconv.cpp:692:29: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:525:26: warning:inconclusive: Possible null pointer dereference: orsel [nullPointer]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:516:25: note: Assignment 'orsel=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:525:26: note: Null pointer dereference
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:110:18: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:110:21: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:203:20: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:203:33: style: The scope of the variable 'natom' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:275:16: style: The scope of the variable 'rsum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:275:22: style: The scope of the variable 'rav' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:423:28: style: The scope of the variable 'odtleg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:423:38: style: The scope of the variable 'otenleg' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:428:17: style: The scope of the variable 'buf' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:225:21: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:203:11: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:225:21: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_nmr.cpp:271:73: style: Parameter 'bounds' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/topology/atomprop.cpp:314:17: style: The scope of the variable 'fac' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/atomprop.cpp:317:10: style: Local variable 'printWarning' shadows outer function [shadowFunction]
gromacs-2021.3/src/gromacs/topology/atomprop.cpp:352:13: note: Shadowed declaration
gromacs-2021.3/src/gromacs/topology/atomprop.cpp:317:10: note: Shadow variable
gromacs-2021.3/src/gromacs/topology/atomprop.cpp:315:17: style: Variable 'def' can be declared with const [constVariable]
gromacs-2021.3/src/gromacs/topology/atomprop.cpp:446:9: style: Consider using std::find_if algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/topology/atomprop.cpp:381:30: style: Unused variable: tmpResidueName [unusedVariable]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:86:18: style: The scope of the variable 'ok' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:186:14: style: The scope of the variable 'inputstring' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:475:33: style: The scope of the variable 'frame' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:475:40: style: The scope of the variable 'frame_out' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:479:23: style: The scope of the variable 'n_append' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:481:23: style: The scope of the variable 'cont_type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:482:23: style: The scope of the variable 'readtime' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:486:34: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:490:32: style: The scope of the variable 'ftpout' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:490:45: style: The scope of the variable 'prevEndStep' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:490:62: style: The scope of the variable 'filetype' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:622:21: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:475:30: note: Shadowed declaration
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:622:21: note: Shadow variable
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:760:21: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:475:30: note: Shadowed declaration
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:760:21: note: Shadow variable
gromacs-2021.3/src/gromacs/tools/trjcat.cpp:490:39: style: Variable 'ftpout' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/topology/atoms.cpp:263:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/atoms.cpp:282:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/atoms.cpp:298:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/atoms.cpp:327:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/atoms.cpp:96:34: style:inconclusive: Function 'done_atomtypes' argument 1 names different: declaration 'at' definition 'atype'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/topology/atoms.h:161:34: note: Function 'done_atomtypes' argument 1 names different: declaration 'at' definition 'atype'.
gromacs-2021.3/src/gromacs/topology/atoms.cpp:96:34: note: Function 'done_atomtypes' argument 1 names different: declaration 'at' definition 'atype'.
gromacs-2021.3/src/gromacs/topology/forcefieldparameters.cpp:47:10: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/block.cpp:238:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/block.cpp:258:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/block.cpp:258:12: style: The scope of the variable 'start' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/block.cpp:291:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/block.cpp:291:12: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/block.cpp:291:15: style: The scope of the variable 'ok' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/block.cpp:291:19: style: The scope of the variable 'size' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/block.cpp:291:25: style: The scope of the variable 'start' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/block.cpp:291:32: style: The scope of the variable 'end' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/block.cpp:50:54: style:inconclusive: Function 'setAllBlocksSizeOne' argument 1 names different: declaration 'numBlocks' definition 'numBlocksToSet'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/topology/block.h:111:34: note: Function 'setAllBlocksSizeOne' argument 1 names different: declaration 'numBlocks' definition 'numBlocksToSet'.
gromacs-2021.3/src/gromacs/topology/block.cpp:50:54: note: Function 'setAllBlocksSizeOne' argument 1 names different: declaration 'numBlocks' definition 'numBlocksToSet'.
gromacs-2021.3/src/gromacs/topology/block.cpp:343:91: style:inconclusive: Function 'pr_listoflists' argument 4 names different: declaration 'block' definition 'lists'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/topology/block.h:226:91: note: Function 'pr_listoflists' argument 4 names different: declaration 'block' definition 'lists'.
gromacs-2021.3/src/gromacs/topology/block.cpp:343:91: note: Function 'pr_listoflists' argument 4 names different: declaration 'block' definition 'lists'.
gromacs-2021.3/src/gromacs/topology/idef.h:379:5: style: Class 'InteractionDefinitions' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/topology/idef.cpp:331:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/idef.cpp:331:12: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/idef.cpp:331:15: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/idef.cpp:331:18: style: The scope of the variable 'type' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/idef.cpp:331:24: style: The scope of the variable 'ftype' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/idef.cpp:380:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/idef.cpp:380:12: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/index.cpp:482:42: style: Array index 'n' is used before limits check. [arrayIndexThenCheck]
gromacs-2021.3/src/gromacs/topology/index.cpp:485:41: style: Array index 'n' is used before limits check. [arrayIndexThenCheck]
gromacs-2021.3/src/gromacs/topology/index.cpp:520:42: style: Array index 'n' is used before limits check. [arrayIndexThenCheck]
gromacs-2021.3/src/gromacs/topology/index.cpp:524:37: style: Array index 'n' is used before limits check. [arrayIndexThenCheck]
gromacs-2021.3/src/gromacs/topology/index.cpp:696:20: warning: Identical inner 'if' condition is always true. [identicalInnerCondition]
gromacs-2021.3/src/gromacs/topology/index.cpp:690:16: note: outer condition: nwater>0
gromacs-2021.3/src/gromacs/topology/index.cpp:696:20: note: identical inner condition: nwater>0
gromacs-2021.3/src/gromacs/topology/index.cpp:703:18: style: Condition 'nion>0' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/topology/index.cpp:690:28: note: Assuming that condition 'nion>0' is not redundant
gromacs-2021.3/src/gromacs/topology/index.cpp:703:18: note: Condition 'nion>0' is always true
gromacs-2021.3/src/gromacs/topology/index.cpp:774:20: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/topology/index.cpp:900:17: warning: scanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/topology/index.cpp:676:21: warning:inconclusive: Possible null pointer dereference: gb [nullPointer]
gromacs-2021.3/src/gromacs/topology/index.cpp:990:22: note: Assignment 'grps=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/topology/index.cpp:1003:24: note: Calling function 'analyse', 2nd argument 'grps' value is 0
gromacs-2021.3/src/gromacs/topology/index.cpp:676:21: note: Null pointer dereference
gromacs-2021.3/src/gromacs/topology/index.cpp:1002:14: warning:inconclusive: Possible null pointer dereference: grps [nullPointer]
gromacs-2021.3/src/gromacs/topology/index.cpp:990:22: note: Assignment 'grps=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/topology/index.cpp:1002:14: note: Null pointer dereference
gromacs-2021.3/src/gromacs/topology/index.cpp:62:10: style: The scope of the variable 'c' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/index.cpp:233:14: style: The scope of the variable 'rname' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/index.cpp:234:17: style: The scope of the variable 'resind' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/index.cpp:234:25: style: The scope of the variable 'natp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/index.cpp:234:31: style: The scope of the variable 'nrestp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/index.cpp:407:14: style: The scope of the variable 'ndx_name' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/index.cpp:480:21: style: The scope of the variable 'resind' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/index.cpp:574:11: style: The scope of the variable 'resnm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/index.cpp:823:14: style: The scope of the variable 'string' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/index.cpp:281:18: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/topology/index.cpp:234:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/topology/index.cpp:281:18: note: Shadow variable
gromacs-2021.3/src/gromacs/topology/index.cpp:520:22: style: Local variable 'n' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/topology/index.cpp:404:14: note: Shadowed declaration
gromacs-2021.3/src/gromacs/topology/index.cpp:520:22: note: Shadow variable
gromacs-2021.3/src/gromacs/topology/index.cpp:598:13: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/topology/index.cpp:575:11: note: Shadowed declaration
gromacs-2021.3/src/gromacs/topology/index.cpp:598:13: note: Shadow variable
gromacs-2021.3/src/gromacs/topology/index.cpp:716:48: style: Parameter 'index' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/topology/mtop_util.h:83:5: style: Class 'AtomProxy' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/topology/mtop_util.cpp:578:23: style: The scope of the variable 'a_molb' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/mtop_util.cpp:617:23: style: The scope of the variable 'a_molb' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/mtop_util.cpp:618:16: style: The scope of the variable 'ip' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/mtop_util.cpp:1031:35: style: Parameter 'symtab' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/topology/mtop_util.cpp:90:22: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/topology/tests/exclusionblocks.cpp:164:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/topology/mtop_util.cpp:100:14: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/topology/mtop_util.cpp:305:23: style: struct member 'gmx_mtop_ilistloop_all::mol' is never used. [unusedStructMember]
gromacs-2021.3/src/gromacs/topology/mtop_util.cpp:306:23: style: struct member 'gmx_mtop_ilistloop_all::a_offset' is never used. [unusedStructMember]
gromacs-2021.3/src/gromacs/topology/tests/idef.cpp:62:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/topology/tests/mtop.cpp:109:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/topology/symtab.h:92:5: style: Class 'StringTable' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/topology/symtab.h:134:5: style: Class 'StringTable' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/topology/tests/symtab.cpp:172:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/topology/symtab.cpp:379:24: style: The scope of the variable 'freeptr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/symtab.cpp:404:24: style: The scope of the variable 'freeptr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/symtab.cpp:424:15: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/symtab.cpp:424:18: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/symtab.cpp:424:21: style: The scope of the variable 'nr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/topology/symtab.cpp:240:48: style:inconclusive: Function 'get_symtab_handle' argument 2 names different: declaration 'index' definition 'name'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/topology/symtab.h:328:48: note: Function 'get_symtab_handle' argument 2 names different: declaration 'index' definition 'name'.
gromacs-2021.3/src/gromacs/topology/symtab.cpp:240:48: note: Function 'get_symtab_handle' argument 2 names different: declaration 'index' definition 'name'.
gromacs-2021.3/src/gromacs/trajectory/trajectoryframe.cpp:113:5: performance: Variable 'box_' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/extract_cluster.cpp:195:53: style:inconclusive: Function 'analyzeFrame' argument 2 names different: declaration 'fr' definition 'frame'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/extract_cluster.cpp:84:58: note: Function 'analyzeFrame' argument 2 names different: declaration 'fr' definition 'frame'.
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/extract_cluster.cpp:195:53: note: Function 'analyzeFrame' argument 2 names different: declaration 'fr' definition 'frame'.
gromacs-2021.3/src/gromacs/topology/topology.h:231:5: style: Struct 'gmx_localtop_t' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/angle.cpp:319:5: performance: Variable 'averageModule_' is assigned in constructor body. Consider performing initialization in initialization list. [useInitializationList]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/rdf.cpp:555:29: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/rdf.cpp:540:22: note: Shadowed declaration
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/rdf.cpp:555:29: note: Shadow variable
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/sasa.cpp:216:16: style: The scope of the variable 'i0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/sasa.cpp:216:20: style: The scope of the variable 'r0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/surfacearea.cpp:163:10: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/surfacearea.cpp:163:13: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/surfacearea.cpp:163:16: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/surfacearea.cpp:163:19: style: The scope of the variable 'tl' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/surfacearea.cpp:163:23: style: The scope of the variable 'tl2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/surfacearea.cpp:163:28: style: The scope of the variable 'tn' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/surfacearea.cpp:280:19: style: The scope of the variable 'tl' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/surfacearea.cpp:280:23: style: The scope of the variable 'tl2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/angle.cpp:73:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/surfacearea.cpp:280:38: style: The scope of the variable 'j1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/trajectoryanalysis/modules/surfacearea.cpp:280:42: style: The scope of the variable 'j2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/clustsize.cpp:99:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:110:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/convert_trj.cpp:77:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/distance.cpp:72:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/extract_cluster.cpp:137:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/freevolume.cpp:72:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/pairdist.cpp:87:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/rdf.cpp:85:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/sasa.cpp:91:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/select.cpp:85:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/surfacearea.cpp:224:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/topologyinformation.cpp:132:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/trajectory.cpp:81:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/trajectoryanalysis/tests/unionfind.cpp:64:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/alignedallocator.cpp:246:23: style: The comparison 'pageSize == -1' is always true. [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/utility/alignedallocator.cpp:244:17: note: 'pageSize' is assigned value '-1' here.
gromacs-2021.3/src/gromacs/utility/alignedallocator.cpp:246:23: note: The comparison 'pageSize == -1' is always true.
gromacs-2021.3/src/gromacs/utility/alignedallocator.cpp:231:10: style: Local variable 'pageSize' shadows outer function [shadowFunction]
gromacs-2021.3/src/gromacs/utility/alignedallocator.h:115:13: note: Shadowed declaration
gromacs-2021.3/src/gromacs/utility/alignedallocator.cpp:231:10: note: Shadow variable
gromacs-2021.3/src/gromacs/utility/binaryinformation.cpp:228:1: error: Found a exit path from function with non-void return type that has missing return statement [missingReturn]
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:420:13: warning:inconclusive: Possible null pointer dereference: b2 [nullPointer]
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:412:13: note: Assignment 'b2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:420:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:430:13: warning:inconclusive: Possible null pointer dereference: b2 [nullPointer]
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:412:13: note: Assignment 'b2=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:430:13: note: Null pointer dereference
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:140:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:236:15: style: The scope of the variable 'ch2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:252:15: style: The scope of the variable 'ch2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:397:47: style: The scope of the variable 'l2space' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:79:20: style:inconclusive: Function 'fgets2' argument 1 names different: declaration 's' definition 'line'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/utility/cstringutil.h:70:20: note: Function 'fgets2' argument 1 names different: declaration 's' definition 'line'.
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:79:20: note: Function 'fgets2' argument 1 names different: declaration 's' definition 'line'.
gromacs-2021.3/src/gromacs/utility/cstringutil.cpp:397:55: style: Variable 'l2space' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/utility/directoryenumerator.cpp:220:10: performance:inconclusive: Technically the member function 'gmx::Impl::nextFile' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/utility/datafilefinder.h:89:5: style: Class 'DataFileOptions' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/utility/datafilefinder.h:93:5: style: Class 'DataFileOptions' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/utility/fatalerror.cpp:234:5: style: Statements following return, break, continue, goto or throw will never be executed. [unreachableCode]
gromacs-2021.3/src/gromacs/utility/exceptions.h:200:5: style: Class 'ExceptionInitializer' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/utility/exceptions.h:202:5: style: Class 'ExceptionInitializer' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/utility/futil.cpp:500:5: error: There is an unknown macro here somewhere. Configuration is required. If GMX_CATCH_ALL_AND_EXIT_WITH_FATAL_ERROR is a macro then please configure it. [unknownMacro]
gromacs-2021.3/src/gromacs/utility/filestream.cpp:230:40: style:inconclusive: Function 'write' argument 1 names different: declaration 'text' definition 'str'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/utility/filestream.h:167:28: note: Function 'write' argument 1 names different: declaration 'text' definition 'str'.
gromacs-2021.3/src/gromacs/utility/filestream.cpp:230:40: note: Function 'write' argument 1 names different: declaration 'text' definition 'str'.
gromacs-2021.3/src/gromacs/utility/inmemoryserializer.cpp:130:5: style: Class 'Impl' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/utility/keyvaluetree.h:110:5: style: Class 'KeyValueTreePath' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/utility/keyvaluetree.h:112:5: style: Class 'KeyValueTreePath' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/utility/keyvaluetree.h:119:14: style: Local variable 'elements' shadows outer function [shadowFunction]
gromacs-2021.3/src/gromacs/utility/keyvaluetree.h:139:37: note: Shadowed declaration
gromacs-2021.3/src/gromacs/utility/keyvaluetree.h:119:14: note: Shadow variable
gromacs-2021.3/src/gromacs/utility/logger.cpp:50:35: style: Parameter 'targets' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/utility/loggerbuilder.cpp:194:67: error: Using pointer to local variable 'collection' that is out of scope. [invalidLifetime]
gromacs-2021.3/src/gromacs/utility/loggerbuilder.cpp:188:50: note: Raw pointer to smart pointer created here.
gromacs-2021.3/src/gromacs/utility/loggerbuilder.cpp:183:54: note: Variable created here.
gromacs-2021.3/src/gromacs/utility/loggerbuilder.cpp:194:67: note: Using pointer to local variable 'collection' that is out of scope.
gromacs-2021.3/src/gromacs/utility/loggerbuilder.h:139:5: style: Class 'LoggerOwner' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/gromacs/utility/keyvaluetreetransform.cpp:489:22: style: Consider using std::accumulate algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/utility/physicalnodecommunicator.h:83:10: performance:inconclusive: Technically the member function 'gmx::PhysicalNodeCommunicator::barrier' can be static (but you may consider moving to unnamed namespace). [functionStatic]
gromacs-2021.3/src/gromacs/utility/physicalnodecommunicator.cpp:114:32: note: Technically the member function 'gmx::PhysicalNodeCommunicator::barrier' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/utility/physicalnodecommunicator.h:83:10: note: Technically the member function 'gmx::PhysicalNodeCommunicator::barrier' can be static (but you may consider moving to unnamed namespace).
gromacs-2021.3/src/gromacs/utility/path.cpp:269:57: performance: Function parameter 'input' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/utility/path.cpp:299:58: performance: Function parameter 'input' should be passed by const reference. [passedByValue]
gromacs-2021.3/src/gromacs/utility/pleasecite.cpp:306:11: style: The scope of the variable 'author' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/utility/pleasecite.cpp:307:11: style: The scope of the variable 'title' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/utility/programcontext.cpp:99:47: style:inconclusive: Function 'setProgramContext' argument 1 names different: declaration 'context' definition 'programContext'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/utility/programcontext.h:211:47: note: Function 'setProgramContext' argument 1 names different: declaration 'context' definition 'programContext'.
gromacs-2021.3/src/gromacs/utility/programcontext.cpp:99:47: note: Function 'setProgramContext' argument 1 names different: declaration 'context' definition 'programContext'.
gromacs-2021.3/src/gromacs/utility/stringstream.cpp:54:44: style:inconclusive: Function 'write' argument 1 names different: declaration 'text' definition 'str'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/utility/stringstream.h:71:28: note: Function 'write' argument 1 names different: declaration 'text' definition 'str'.
gromacs-2021.3/src/gromacs/utility/stringstream.cpp:54:44: note: Function 'write' argument 1 names different: declaration 'text' definition 'str'.
gromacs-2021.3/src/gromacs/utility/strdb.cpp:110:12: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/utility/strconvert.cpp:60:33: style:inconclusive: Function 'boolFromString' argument 1 names different: declaration 'str' definition 'value'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/utility/strconvert.h:68:33: note: Function 'boolFromString' argument 1 names different: declaration 'str' definition 'value'.
gromacs-2021.3/src/gromacs/utility/strconvert.cpp:60:33: note: Function 'boolFromString' argument 1 names different: declaration 'str' definition 'value'.
gromacs-2021.3/src/gromacs/utility/stringutil.cpp:203:30: style: The scope of the variable 'currPos' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/utility/sysinfo.cpp:154:5: style: Obsolescent function 'ctime_r' called. It is recommended to use 'strftime' instead. [prohibitedctime_rCalled]
gromacs-2021.3/src/gromacs/utility/tests/alignedallocator.cpp:88:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/arrayref.cpp:66:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/cstringutil.cpp:77:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/defaultinitializationallocator.cpp:66:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/enumerationhelpers.cpp:67:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/fixedcapacityvector.cpp:63:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/inmemoryserializer.cpp:184:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/keyvaluetreeserializer.cpp:119:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/keyvaluetreetransform.cpp:110:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/listoflists.cpp:72:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/logger.cpp:63:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/mdmodulenotification-impl.cpp:98:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/mutex.cpp:77:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/path.cpp:75:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/physicalnodecommunicator.cpp:55:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/physicalnodecommunicator_mpi.cpp:56:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/range.cpp:67:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/strconvert.cpp:63:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/stringutil.cpp:90:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/template_mp.cpp:60:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/textreader.cpp:88:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/tests/textwriter.cpp:69:1: error: syntax error [syntaxError]
gromacs-2021.3/src/gromacs/utility/textreader.cpp:111:40: style:inconclusive: Function 'readLine' argument 1 names different: declaration 'line' definition 'linePtr'. [funcArgNamesDifferent]
gromacs-2021.3/src/gromacs/utility/textreader.h:140:32: note: Function 'readLine' argument 1 names different: declaration 'line' definition 'linePtr'.
gromacs-2021.3/src/gromacs/utility/textreader.cpp:111:40: note: Function 'readLine' argument 1 names different: declaration 'line' definition 'linePtr'.
gromacs-2021.3/src/gromacs/utility/txtdump.cpp:96:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/utility/txtdump.cpp:112:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/utility/txtdump.cpp:128:17: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/utility/txtdump.cpp:128:20: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/utility/txtdump.cpp:196:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/programs/mdrun/tests/checkpoint.cpp:109:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/compressed_x_output.cpp:70:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/densityfittingmodule.cpp:162:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/dispersion_correction.cpp:67:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/domain_decomposition.cpp:62:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/ewaldsurfaceterm.cpp:89:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/exactcontinuation.cpp:350:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/energycomparison.cpp:93:14: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/programs/mdrun/tests/freeenergy.cpp:92:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/grompp.cpp:69:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/energyreader.cpp:66:80: style:inconclusive: Function 'openEnergyFileToReadTerms' argument 2 names different: declaration 'requiredEnergyTermNames' definition 'namesOfRequiredEnergyTerms'. [funcArgNamesDifferent]
gromacs-2021.3/src/programs/mdrun/tests/energyreader.h:92:80: note: Function 'openEnergyFileToReadTerms' argument 2 names different: declaration 'requiredEnergyTermNames' definition 'namesOfRequiredEnergyTerms'.
gromacs-2021.3/src/programs/mdrun/tests/energyreader.cpp:66:80: note: Function 'openEnergyFileToReadTerms' argument 2 names different: declaration 'requiredEnergyTermNames' definition 'namesOfRequiredEnergyTerms'.
gromacs-2021.3/src/programs/mdrun/tests/initialconstraints.cpp:75:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/interactiveMD.cpp:81:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/mimic.cpp:102:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/minimize.cpp:98:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/multiple_time_stepping.cpp:83:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/multisim.cpp:79:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/normalmodes.cpp:91:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/orires.cpp:67:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/outputfiles.cpp:75:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/periodicactions.cpp:204:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/pmetest.cpp:193:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/replicaexchange.cpp:86:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/rerun.cpp:164:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/simple_mdrun.cpp:106:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/simulator.cpp:83:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/simulatorcomparison.cpp:90:50: style:inconclusive: Function 'compareEnergies' argument 4 names different: declaration 'maxNumFrams' definition 'maxNumFrames'. [funcArgNamesDifferent]
gromacs-2021.3/src/programs/mdrun/tests/simulatorcomparison.h:72:50: note: Function 'compareEnergies' argument 4 names different: declaration 'maxNumFrams' definition 'maxNumFrames'.
gromacs-2021.3/src/programs/mdrun/tests/simulatorcomparison.cpp:90:50: note: Function 'compareEnergies' argument 4 names different: declaration 'maxNumFrams' definition 'maxNumFrames'.
gromacs-2021.3/src/programs/mdrun/tests/swapcoords.cpp:73:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/tabulated_bonded_interactions.cpp:124:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/termination.cpp:84:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/mdrun/tests/tpitest.cpp:109:1: error: syntax error [syntaxError]
gromacs-2021.3/src/programs/view/buttons.cpp:61:16: style: The scope of the variable 'wd' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/buttons.cpp:85:15: style: The scope of the variable 'bbox' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/buttons.cpp:99:15: style: The scope of the variable 'vbox' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/buttons.cpp:100:15: style: The scope of the variable 'y0' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/buttons.cpp:173:23: style: The scope of the variable 'ID' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/dialogs.cpp:259:16: style: The scope of the variable 'nskip' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/dialogs.cpp:259:23: style: The scope of the variable 'nwait' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/dialogs.cpp:275:23: style: Variable 'bBond' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/programs/view/dialogs.cpp:280:23: style: Variable 'bBond' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/programs/view/molps.cpp:103:11: style: The scope of the variable 'ic' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/molps.cpp:103:16: style: The scope of the variable 'jc' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nleg.cpp:69:18: style: The scope of the variable 'nb' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/molps.cpp:104:11: style: The scope of the variable 'xi' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nleg.cpp:69:22: style: The scope of the variable 'mij' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/molps.cpp:104:15: style: The scope of the variable 'yi' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nleg.cpp:118:27: style: The scope of the variable 'i0' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/molps.cpp:104:19: style: The scope of the variable 'xj' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nleg.cpp:118:42: style: The scope of the variable 'y' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/molps.cpp:104:23: style: The scope of the variable 'yj' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nleg.cpp:118:45: style: The scope of the variable 'x1' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/molps.cpp:105:11: style: The scope of the variable 'xm' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nleg.cpp:118:49: style: The scope of the variable 'x0' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/molps.cpp:105:15: style: The scope of the variable 'ym' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nleg.cpp:119:24: style: The scope of the variable 'cind' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/manager.cpp:458:21: style: Obsolescent function 'usleep' called. It is recommended to use 'nanosleep' or 'setitimer' instead. [prohibitedusleepCalled]
gromacs-2021.3/src/programs/view/molps.cpp:137:15: style: The scope of the variable 'obj' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/manager.cpp:88:17: style: The scope of the variable 'delta' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/manager.cpp:88:24: style: The scope of the variable 'ftype' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/manager.cpp:168:19: style: The scope of the variable 'col' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/manager.cpp:301:13: style: The scope of the variable 'm0' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/manager.cpp:301:17: style: The scope of the variable 'm1' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nmol.cpp:330:15: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nmol.cpp:331:15: style: The scope of the variable 'bAdd' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nmol.cpp:382:15: style: The scope of the variable 'obj' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nmol.cpp:433:20: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nmol.cpp:433:23: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/nmol.cpp:310:35: style: Parameter 'zz' can be declared with const [constParameter]
gromacs-2021.3/src/programs/view/pulldown.cpp:54:20: style: The scope of the variable 'x' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/pulldown.cpp:54:23: style: The scope of the variable 'x1' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/pulldown.cpp:54:30: style: The scope of the variable 'nsel' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/x11.cpp:75:18: style: The scope of the variable 'fontlist' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/x11.cpp:299:24: style: The scope of the variable 'v_name' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/x11.cpp:301:16: style: The scope of the variable 'v_class' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlg.cpp:379:12: warning: Either the condition 'lines' is redundant or there is possible null pointer dereference: lines. [nullPointerRedundantCheck]
gromacs-2021.3/src/programs/view/xdlg.cpp:398:17: note: Assuming that condition 'lines' is not redundant
gromacs-2021.3/src/programs/view/xdlg.cpp:379:12: note: Null pointer dereference
gromacs-2021.3/src/programs/view/xdlg.cpp:704:42: warning: Either the condition 'dlg->dlgitem[i]' is redundant or there is possible null pointer dereference: dlg->dlgitem[i]. [nullPointerRedundantCheck]
gromacs-2021.3/src/programs/view/xdlg.cpp:705:29: note: Assuming that condition 'dlg->dlgitem[i]' is not redundant
gromacs-2021.3/src/programs/view/xdlg.cpp:704:42: note: Null pointer dereference
gromacs-2021.3/src/programs/view/xdlg.cpp:212:16: style: The scope of the variable 'old_x' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlg.cpp:212:23: style: The scope of the variable 'old_y' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlg.cpp:326:16: style: The scope of the variable 'dlgitem' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlg.cpp:456:16: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlg.cpp:456:19: style: The scope of the variable 'nWndProc' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlg.cpp:664:16: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlg.cpp:696:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlg.cpp:194:18: style: Local variable 'id' shadows outer argument [shadowArgument]
gromacs-2021.3/src/programs/view/xdlg.cpp:160:38: note: Shadowed declaration
gromacs-2021.3/src/programs/view/xdlg.cpp:194:18: note: Shadow variable
gromacs-2021.3/src/programs/view/xdlg.cpp:232:18: style: Local variable 'id' shadows outer argument [shadowArgument]
gromacs-2021.3/src/programs/view/xdlg.cpp:209:37: note: Shadowed declaration
gromacs-2021.3/src/programs/view/xdlg.cpp:232:18: note: Shadow variable
gromacs-2021.3/src/programs/view/xdlgitem.cpp:71:17: style: The scope of the variable 'et' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlgitem.cpp:100:20: style: The scope of the variable 'c' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlgitem.cpp:310:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlgitem.cpp:310:12: style: The scope of the variable 'sl' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlgitem.cpp:329:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlgitem.cpp:346:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/programs/view/xdlgitem.cpp:344:37: style: Parameter 'pos' can be declared with const [constParameter]
gromacs-2021.3/src/testutils/loggertest.h:68:21: style:inconclusive: Technically the member function 'gmx::test::LoggerTestHelper::logger' can be const. [functionConst]
gromacs-2021.3/src/testutils/loggertest.cpp:98:35: note: Technically the member function 'gmx::test::LoggerTestHelper::logger' can be const.
gromacs-2021.3/src/testutils/loggertest.h:68:21: note: Technically the member function 'gmx::test::LoggerTestHelper::logger' can be const.
gromacs-2021.3/src/testutils/cmdlinetest.h:116:5: style: Class 'CommandLine' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/testutils/cmdlinetest.h:118:5: style: Class 'CommandLine' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/testutils/cmdlinetest.cpp:83:5: style: Class 'Impl' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/testutils/cmdlinetest.cpp:84:5: style: Class 'Impl' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/testutils/stringtest.cpp:70:1: error: syntax error [syntaxError]
gromacs-2021.3/src/testutils/test_device.cpp:69:5: style: Class 'Impl' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/testutils/testasserts.cpp:74:1: error: syntax error [syntaxError]
gromacs-2021.3/src/testutils/testfilemanager.cpp:125:1: error: syntax error [syntaxError]
gromacs-2021.3/src/testutils/refdata_xml.cpp:182:27: style:inconclusive: Function 'readEntry' argument 1 names different: declaration 'node' definition 'element'. [funcArgNamesDifferent]
gromacs-2021.3/src/testutils/refdata_xml.cpp:93:27: note: Function 'readEntry' argument 1 names different: declaration 'node' definition 'element'.
gromacs-2021.3/src/testutils/refdata_xml.cpp:182:27: note: Function 'readEntry' argument 1 names different: declaration 'node' definition 'element'.
gromacs-2021.3/src/testutils/refdata_xml.cpp:360:80: style:inconclusive: Function 'writeReferenceDataFile' argument 2 names different: declaration 'root' definition 'rootEntry'. [funcArgNamesDifferent]
gromacs-2021.3/src/testutils/refdata_xml.h:78:80: note: Function 'writeReferenceDataFile' argument 2 names different: declaration 'root' definition 'rootEntry'.
gromacs-2021.3/src/testutils/refdata_xml.cpp:360:80: note: Function 'writeReferenceDataFile' argument 2 names different: declaration 'root' definition 'rootEntry'.
gromacs-2021.3/src/testutils/testmatchers.cpp:129:5: style: Class 'RVecMatcher < real >' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/testutils/tests/interactivetest.cpp:137:1: error: syntax error [syntaxError]
gromacs-2021.3/src/testutils/testmatchers.cpp:72:5: style: Class 'FloatTypeMatcher < float >' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/testutils/testmatchers.cpp:72:5: style: Class 'FloatTypeMatcher < double >' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/testutils/testmatchers.cpp:72:5: style: Class 'FloatTypeMatcher < real >' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/testutils/tests/mpitest.cpp:64:1: error: syntax error [syntaxError]
gromacs-2021.3/src/testutils/tests/refdata_tests.cpp:96:1: error: syntax error [syntaxError]
gromacs-2021.3/src/testutils/tests/testasserts_tests.cpp:68:1: error: syntax error [syntaxError]
gromacs-2021.3/src/testutils/tests/xvgtest_tests.cpp:69:1: error: syntax error [syntaxError]
gromacs-2021.3/src/testutils/textblockmatchers.cpp:82:5: style: Class 'FilteringExactTextMatcher' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/testutils/textblockmatchers.cpp:87:28: style: Consider using std::transform algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/testutils/tprfilegenerator.h:68:5: style: Class 'TprAndFileManager' has a constructor with 1 argument that is not explicit. [noExplicitConstructor]
gromacs-2021.3/src/testutils/refdata.cpp:636:80: style:inconclusive: Function 'processItem' argument 1 names different: declaration 'name' definition 'type'. [funcArgNamesDifferent]
gromacs-2021.3/src/testutils/refdata.cpp:482:78: note: Function 'processItem' argument 1 names different: declaration 'name' definition 'type'.
gromacs-2021.3/src/testutils/refdata.cpp:636:80: note: Function 'processItem' argument 1 names different: declaration 'name' definition 'type'.
gromacs-2021.3/src/testutils/refdata.cpp:1002:48: style:inconclusive: Function 'checkAny' argument 1 names different: declaration 'value' definition 'any'. [funcArgNamesDifferent]
gromacs-2021.3/src/testutils/refdata.h:408:30: note: Function 'checkAny' argument 1 names different: declaration 'value' definition 'any'.
gromacs-2021.3/src/testutils/refdata.cpp:1002:48: note: Function 'checkAny' argument 1 names different: declaration 'value' definition 'any'.
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:351:28: warning: sscanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:1465:9: warning:inconclusive: Possible null pointer dereference: nPMEnodes [nullPointer]
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:1414:26: note: Assignment 'nPMEnodes=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:1465:9: note: Null pointer dereference
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:1466:76: warning:inconclusive: Possible null pointer dereference: nPMEnodes [nullPointer]
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:1414:26: note: Assignment 'nPMEnodes=nullptr', assigned value is 0
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:1466:76: note: Null pointer dereference
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:670:16: style: The scope of the variable 'cp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:1149:17: style: The scope of the variable 'opt' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:1233:12: style: The scope of the variable 'npme' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:1233:18: style: The scope of the variable 'npp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:1901:17: style: The scope of the variable 'name' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:2151:11: style: The scope of the variable 'guessPMEnodes' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/tune_pme.cpp:422:16: style: Variable 's' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:156:22: warning: scanf() without field width limits can crash with huge input data. [invalidscanf]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:115:22: style: The scope of the variable 'yesno' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:116:22: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:357:9: style: The scope of the variable 'pbc_enum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:373:17: style: The scope of the variable 'unitcell_enum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:385:17: style: The scope of the variable 'ecenter' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:387:9: style: The scope of the variable 'fit_enum' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:479:18: style: The scope of the variable 'file_nr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:481:18: style: The scope of the variable 'flags' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:485:18: style: The scope of the variable 'm' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:485:21: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:485:24: style: The scope of the variable 'd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:485:27: style: The scope of the variable 'frame' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:485:34: style: The scope of the variable 'outframe' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:485:44: style: The scope of the variable 'natoms' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:485:65: style: The scope of the variable 'newstep' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:485:78: style: The scope of the variable 'model_nr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:499:17: style: The scope of the variable 'ndrop' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:499:34: style: The scope of the variable 'drop0' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:499:45: style: The scope of the variable 'drop1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:499:56: style: The scope of the variable 'dropuse' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:503:17: style: The scope of the variable 'nfitdim' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:512:17: style: The scope of the variable 'out_file2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:512:34: style: The scope of the variable 'charpt' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:515:17: style: The scope of the variable 'top_title' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:515:33: style: The scope of the variable 'timestr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:515:46: style: The scope of the variable 'stepstr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/tools/trjconv.cpp:515:59: style: The scope of the variable 'filemode' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2742:13: style: The if condition is the same as the previous if condition [duplicateCondition]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2727:13: note: First condition
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2742:13: note: Second condition
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:737:14: style: Condition 'datable' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2016:16: style: Condition 'acType!=AC_NN' is always true [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2002:14: note: Assignment 'acType=AC_LUZAR', assigned value is 3
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2016:16: note: Condition 'acType!=AC_NN' is always true
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2088:29: style: Condition 'bContact' is always false [knownConditionTrueFalse]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2075:31: note: Assuming that condition 'bContact' is not redundant
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2088:29: note: Condition 'bContact' is always false
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1801:21: style: Variable 'tl.ndelta' is reassigned a value before the old one has been used. [redundantAssignment]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1787:17: note: tl.ndelta is assigned
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1801:21: note: tl.ndelta is overwritten
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:307:17: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:307:20: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:430:25: style: The scope of the variable 'hh' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:616:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:648:12: style: The scope of the variable 'n' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:701:9: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:752:19: style: The scope of the variable 'j' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:754:16: style: The scope of the variable 'nr1' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:754:21: style: The scope of the variable 'nr2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:754:26: style: The scope of the variable 'nr3' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1292:17: style: The scope of the variable 'hh' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1467:36: style: The scope of the variable 'ii' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1467:44: style: The scope of the variable 'id' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1827:18: style: The scope of the variable 'i' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1830:14: style: The scope of the variable 'tmp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1830:19: style: The scope of the variable 'sn2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1830:37: style: The scope of the variable 'sk2' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2294:14: style: The scope of the variable 'ddd' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2600:23: style: The scope of the variable 'trrStatus' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2611:40: style: The scope of the variable 'k' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2611:47: style: The scope of the variable 'ogrp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2612:23: style: The scope of the variable 'xi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2612:31: style: The scope of the variable 'yi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2612:35: style: The scope of the variable 'zi' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2612:39: style: The scope of the variable 'ai' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2613:23: style: The scope of the variable 'xj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2613:27: style: The scope of the variable 'yj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2613:31: style: The scope of the variable 'zj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2613:35: style: The scope of the variable 'aj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2613:39: style: The scope of the variable 'xjj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2613:44: style: The scope of the variable 'yjj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2613:49: style: The scope of the variable 'zjj' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2616:23: style: The scope of the variable 'grp' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2616:42: style: The scope of the variable 'resdist' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2616:51: style: The scope of the variable 'ihb' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2625:23: style: The scope of the variable 'ii' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2626:23: style: The scope of the variable 'threadNr' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3406:22: style: The scope of the variable 'id' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3406:26: style: The scope of the variable 'ia' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3406:30: style: The scope of the variable 'hh' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3406:34: style: The scope of the variable 'x' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3406:37: style: The scope of the variable 'y' can be reduced. [variableScope]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2605:23: style: Local variable 'grpnames' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:111:20: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2605:23: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2667:21: style: Local variable 'leg' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2617:23: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2667:21: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3406:30: style: Local variable 'hh' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2625:27: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3406:30: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3406:34: style: Local variable 'x' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2607:23: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3406:34: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3454:25: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2611:30: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3454:25: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3478:16: style: Local variable 'i' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2611:30: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3478:16: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3478:19: style: Local variable 'j' shadows outer variable [shadowVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2611:37: note: Shadowed declaration
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3478:19: note: Shadow variable
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2595:17: style: Variable 'hbmap' can be declared with const [constVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2597:17: style: Variable 'hbrgb' can be declared with const [constVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1206:56: style: Parameter 'grid' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:2238:67: style: Parameter 'hb' can be declared with const [constParameter]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:3418:27: style: Consider using std::fill algorithm instead of a raw loop. [useStlAlgorithm]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1785:17: style: Variable 'tl.n1' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1786:17: style: Variable 'tl.nparams' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1788:17: style: Variable 'tl.t' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1789:17: style: Variable 'tl.ct' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1790:17: style: Variable 'tl.nt' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1791:17: style: Variable 'tl.kt' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1792:17: style: Variable 'tl.sigma_ct' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1793:17: style: Variable 'tl.sigma_nt' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1794:17: style: Variable 'tl.sigma_kt' is assigned a value that is never used. [unreadVariable]
gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:1801:21: style: Variable 'tl.ndelta' is assigned a value that is never used. [unreadVariable]
diff:
2.6 * yacc.c:358  *:732:32: style: Parameter 'yyssp' can be declared with const [constParameter]
head gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:263:22: warning: Either the condition 'available<8' is redundant or the array 'ctx->buffer[64]' is accessed at index 71, which is out of bounds. [arrayIndexOutOfBoundsCond]
     gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:262:16: note: Assuming that condition 'available<8' is not redundant
     gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:260:12: note: available is assigned '64-used' here.
     gromacs-2021.3/src/external/clFFT/src/library/md5sum.cpp:263:22: note: Array index out of bounds
2.6 gromacs-2021.3/src/external/googletest/googletest/src/gtest-printers.cc:414:70: style: Parameter 'os' can be declared with const [constParameter]
2.6 gromacs-2021.3/src/external/googletest/googletest/src/gtest-printers.cc:64:56: style: Parameter 'os' can be declared with const [constParameter]
2.6 gromacs-2021.3/src/external/googletest/googletest/src/gtest.cc:1219:34: style: Parameter 'ss' can be declared with const [constParameter]
2.6 gromacs-2021.3/src/external/thread_mpi/src/alltoall.cpp:173:40: style: Parameter 'sendcounts' can be declared with const [constParameter]
2.6 gromacs-2021.3/src/external/thread_mpi/src/alltoall.cpp:175:40: style: Parameter 'recvcounts' can be declared with const [constParameter]
2.6 gromacs-2021.3/src/external/thread_mpi/src/gather.cpp:169:38: style: Parameter 'recvcounts' can be declared with const [constParameter]
2.6 gromacs-2021.3/src/external/thread_mpi/src/scatter.cpp:198:45: style: Parameter 'sendcounts' can be declared with const [constParameter]
2.6 gromacs-2021.3/src/external/tng_io/src/compression/xtc2.c:437:36: style: Parameter 'index' can be declared with const [constParameter]
2.6 gromacs-2021.3/src/external/tng_io/src/compression/xtc2.c:470:67: style: Parameter 'index' can be declared with const [constParameter]
2.6 gromacs-2021.3/src/external/tng_io/src/compression/xtc2.c:516:79: style: Parameter 'index' can be declared with const [constParameter]
head gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:1048:59: style: Condition '*((const char*)&block->header_contents_size)!=0x00' is always true [knownConditionTrueFalse]
2.6 gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:1048:59: style: Condition '*((const char*)&block->header_contents_size)!=0x00' is always true [knownConditionTrueFalse]
     gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:1038:36: note: Assuming that condition 'block->header_contents_size==0' is not redundant
     gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:1048:59: note: Condition '*((const char*)&block->header_contents_size)!=0x00' is always true
head gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:1049:65: style: Condition '*((const char*)(&block->header_contents_size)+7)==0x00' is always false [knownConditionTrueFalse]
2.6 gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:1049:65: style: Condition '*((const char*)(&block->header_contents_size)+7)==0x00' is always false [knownConditionTrueFalse]
     gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:1038:36: note: Assuming that condition 'block->header_contents_size==0' is not redundant
     gromacs-2021.3/src/external/tng_io/src/lib/tng_io.c:1049:65: note: Condition '*((const char*)(&block->header_contents_size)+7)==0x00' is always false
2.6 gromacs-2021.3/src/external/tng_io/src/tests/compression/testsuite.c:82:38: style: Parameter 'direction' can be declared with const [constParameter]
head gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:114:17: warning: Either the condition 'localAtomSet_==nullptr' is redundant or there is possible null pointer dereference: localAtomSet_. [nullPointerRedundantCheck]
     gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:108:27: note: Assuming that condition 'localAtomSet_==nullptr' is not redundant
     gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:114:17: note: Null pointer dereference
head gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:128:17: warning: Either the condition 'transformationToDensityLattice_==nullptr' is redundant or there is possible null pointer dereference: transformationToDensityLattice_. [nullPointerRedundantCheck]
     gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:123:45: note: Assuming that condition 'transformationToDensityLattice_==nullptr' is not redundant
     gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:128:17: note: Null pointer dereference
head gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:140:16: warning: Either the condition 'referenceDensity_==nullptr' is redundant or there is possible null pointer dereference: referenceDensity_. [nullPointerRedundantCheck]
     gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:136:31: note: Assuming that condition 'referenceDensity_==nullptr' is not redundant
     gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:140:16: note: Null pointer dereference
head gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:195:17: warning: Either the condition 'pbcType_==nullptr' is redundant or there is possible null pointer dereference: pbcType_. [nullPointerRedundantCheck]
     gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:190:22: note: Assuming that condition 'pbcType_==nullptr' is not redundant
     gromacs-2021.3/src/gromacs/applied_forces/densityfitting/densityfitting.cpp:195:17: note: Null pointer dereference
head gromacs-2021.3/src/gromacs/commandline/filenm.cpp:252:62: performance: Function parameter 'filename' should be passed by const reference. [passedByValue]
head gromacs-2021.3/src/gromacs/commandline/filenm.cpp:267:51: performance: Function parameter 'filename' should be passed by const reference. [passedByValue]
head gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:162:12: error: Reference to local variable returned. [returnReference]
     gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:159:62: note: Raw pointer to smart pointer created here.
     gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:162:12: note: Reference to local variable returned.
head gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:162:12: warning: Access of moved variable '*'. [accessMoved]
     gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:161:58: note: Calling std::move(modulePtr)
     gromacs-2021.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:162:12: note: Access of moved variable '*'.
head gromacs-2021.3/src/gromacs/domdec/domdec.cpp:450:25: style: Condition 'shiftForcesNeedPbc' is always true [knownConditionTrueFalse]
2.6 gromacs-2021.3/src/gromacs/domdec/domdec.cpp:450:25: style: Condition 'shiftForcesNeedPbc' is always true [knownConditionTrueFalse]
     gromacs-2021.3/src/gromacs/domdec/domdec.cpp:415:17: note: Assuming that condition '!shiftForcesNeedPbc' is not redundant
     gromacs-2021.3/src/gromacs/domdec/domdec.cpp:444:33: note: Assuming container is not empty
     gromacs-2021.3/src/gromacs/domdec/domdec.cpp:450:25: note: Condition 'shiftForcesNeedPbc' is always true
2.6 gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:483:12: error: Uninitialized variable: mid [uninitvar]
     gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:465:12: note: Assuming condition is false
     gromacs-2021.3/src/gromacs/domdec/domdec_topology.cpp:483:12: note: Uninitialized variable: mid
head gromacs-2021.3/src/gromacs/ewald/pme.cpp:605:25: style: Condition 'pme->nnodes!=numPmeDomains.x*numPmeDomains.y' is always true [knownConditionTrueFalse]
     gromacs-2021.3/src/gromacs/ewald/pme.cpp:591:20: note: Assignment 'pme->nnodes=1', assigned value is 1
     gromacs-2021.3/src/gromacs/ewald/pme.cpp:597:43: note: Assuming that condition 'numPmeDomains.x*numPmeDomains.y>1' is not redundant
     gromacs-2021.3/src/gromacs/ewald/pme.cpp:605:25: note: Condition 'pme->nnodes!=numPmeDomains.x*numPmeDomains.y' is always true
2.6 gromacs-2021.3/src/gromacs/ewald/pme.cpp:605:25: style: Condition 'pme->nnodes!=numPmeDomains.x*numPmeDomains.y' is always true [knownConditionTrueFalse]
     gromacs-2021.3/src/gromacs/ewald/pme.cpp:597:43: note: Assuming that condition 'numPmeDomains.x*numPmeDomains.y>1' is not redundant
     gromacs-2021.3/src/gromacs/ewald/pme.cpp:605:25: note: Condition 'pme->nnodes!=numPmeDomains.x*numPmeDomains.y' is always true
2.6 gromacs-2021.3/src/gromacs/fileio/readinp.cpp:176:46: style: Parameter 'inp' can be declared with const [constParameter]
2.6 gromacs-2021.3/src/gromacs/fileio/readinp.cpp:309:45: style: Parameter 'inp' can be declared with const [constParameter]
head gromacs-2021.3/src/gromacs/gmxana/dlist.cpp:200:70: style: Condition 'atm.Cn[1]!=-1' is always true [knownConditionTrueFalse]
2.6 gromacs-2021.3/src/gromacs/gmxana/dlist.cpp:200:70: style: Condition 'atm.Cn[1]!=-1' is always true [knownConditionTrueFalse]
     gromacs-2021.3/src/gromacs/gmxana/dlist.cpp:194:41: note: Assuming that condition 'atm.Cn[1]!=-1' is not redundant
     gromacs-2021.3/src/gromacs/gmxana/dlist.cpp:200:70: note: Condition 'atm.Cn[1]!=-1' is always true
head gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:737:14: style: Condition 'datable' is always true [knownConditionTrueFalse]
2.6 gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:737:14: style: Condition 'datable' is always true [knownConditionTrueFalse]
     gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:703:9: note: Assuming that condition '!datable' is not redundant
     gromacs-2021.3/src/gromacs/gmxana/gmx_hbond.cpp:737:14: note: Condition 'datable' is always true
2.6 gromacs-2021.3/src/gromacs/gmxana/gmx_mindist.cpp:358:47: style: Parameter 'residue' can be declared with const [constParameter]
2.6 gromacs-2021.3/src/gromacs/gmxana/gmx_rotmat.cpp:64:40: style: Parameter 'index' can be declared with const [constParameter]
head gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:106:13: style: Condition 'ptr' is always true [knownConditionTrueFalse]
2.6 gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:106:13: style: Condition 'ptr' is always true [knownConditionTrueFalse]
     gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:103:38: note: Assuming that condition '(ptr=strstr(buf,word))!=nullptr' is not redundant
     gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:106:13: note: Condition 'ptr' is always true
head gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:756:14: style: Condition 'handle' is always true [knownConditionTrueFalse]
2.6 gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:756:14: style: Condition 'handle' is always true [knownConditionTrueFalse]
     gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:744:9: note: Assuming that condition '!handle' is not redundant
     gromacs-2021.3/src/gromacs/gmxpreprocess/gmxcpp.cpp:756:14: note: Condition 'handle' is always true
head gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:70:35: style: Condition 'grp>=ngacc' is always false [knownConditionTrueFalse]
     gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:70:22: note: Assuming that condition 'grp<0' is not redundant
     gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:62:15: note: Assuming that condition 'ngacc>0' is not redundant
     gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:65:47: note: Assuming container is not empty
     gromacs-2021.3/src/gromacs/mdlib/tgroup.cpp:70:35: note: Condition 'grp>=ngacc' is always false
head gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1787:16: error:inconclusive: Using pointer to local variable 'stateGpu' that is out of scope. [invalidLifetime]
     gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1726:40: note: Raw pointer to smart pointer created here.
     gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1714:54: note: Variable created here.
     gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1787:16: note: Using pointer to local variable 'stateGpu' that is out of scope.
head gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1809:12: error:inconclusive: Using pointer to local variable 'stateGpu' that is out of scope. [invalidLifetime]
     gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1726:40: note: Raw pointer to smart pointer created here.
     gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1714:54: note: Variable created here.
     gromacs-2021.3/src/gromacs/mdrun/runner.cpp:1809:12: note: Using pointer to local variable 'stateGpu' that is out of scope.
2.6 gromacs-2021.3/src/gromacs/selection/poscalc.cpp:144:33: warning: Either the condition 'ii>=0' is redundant, otherwise there is negative array index -1. [negativeContainerIndex]
     gromacs-2021.3/src/gromacs/selection/poscalc.cpp:142:27: note: Assuming that condition 'ii>=0' is not redundant
     gromacs-2021.3/src/gromacs/selection/poscalc.cpp:141:33: note: Assignment to 'ii=index[i]'
     gromacs-2021.3/src/gromacs/selection/poscalc.cpp:141:26: note: ii is assigned 'index[i]' here.
     gromacs-2021.3/src/gromacs/selection/poscalc.cpp:144:33: note: Negative array index
2.6 gromacs-2021.3/src/gromacs/simd/support.cpp:310:35: style: Condition '!(compiled==SimdType::X86_Avx&&wanted==SimdType::X86_Avx128Fma)' is always true [knownConditionTrueFalse]
     gromacs-2021.3/src/gromacs/simd/support.cpp:310:23: note: Assuming that condition 'compiled>wanted' is not redundant
     gromacs-2021.3/src/gromacs/simd/support.cpp:310:35: note: Condition '!(compiled==SimdType::X86_Avx&&wanted==SimdType::X86_Avx128Fma)' is always true
head gromacs-2021.3/src/gromacs/utility/loggerbuilder.cpp:194:67: error: Using pointer to local variable 'collection' that is out of scope. [invalidLifetime]
     gromacs-2021.3/src/gromacs/utility/loggerbuilder.cpp:188:50: note: Raw pointer to smart pointer created here.
     gromacs-2021.3/src/gromacs/utility/loggerbuilder.cpp:183:54: note: Variable created here.
     gromacs-2021.3/src/gromacs/utility/loggerbuilder.cpp:194:67: note: Using pointer to local variable 'collection' that is out of scope.
head gromacs-2021.3/src/gromacs/utility/path.cpp:269:57: performance: Function parameter 'input' should be passed by const reference. [passedByValue]
head gromacs-2021.3/src/gromacs/utility/path.cpp:299:58: performance: Function parameter 'input' should be passed by const reference. [passedByValue]
2.6 gromacs-2021.3/src/programs/view/nmol.cpp:183:88: style: Parameter 'size' can be declared with const [constParameter]


DONE